Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
KRTAP4-1Q9BYQ7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
KRTAP4-1Q9BYQ7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
KRTAP4-1Q9BYQ7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
KRTAP4-1Q9BYQ7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
KRTAP4-1Q9BYQ7 MIR935-201ENST00000401179 91 ntBASIC12.79□□□□□ -0.36
KRTAP4-1Q9BYQ7 UNC93B8-201ENST00000511903 705 ntBASIC12.79□□□□□ -0.36
KRTAP4-1Q9BYQ7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
KRTAP4-1Q9BYQ7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
KRTAP4-1Q9BYQ7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
KRTAP4-1Q9BYQ7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
KRTAP4-1Q9BYQ7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
KRTAP4-1Q9BYQ7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC12.78□□□□□ -0.36
KRTAP4-1Q9BYQ7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
KRTAP4-1Q9BYQ7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
KRTAP4-1Q9BYQ7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KRTAP4-1Q9BYQ7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
KRTAP4-1Q9BYQ7 Z92544.1-202ENST00000571933 1220 ntBASIC12.78□□□□□ -0.36
KRTAP4-1Q9BYQ7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC12.78□□□□□ -0.36
KRTAP4-1Q9BYQ7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
KRTAP4-1Q9BYQ7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KRTAP4-1Q9BYQ7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
KRTAP4-1Q9BYQ7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
KRTAP4-1Q9BYQ7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC12.77□□□□□ -0.36
KRTAP4-1Q9BYQ7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC12.77□□□□□ -0.37
KRTAP4-1Q9BYQ7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
KRTAP4-1Q9BYQ7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC12.77□□□□□ -0.37
KRTAP4-1Q9BYQ7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
KRTAP4-1Q9BYQ7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KRTAP4-1Q9BYQ7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KRTAP4-1Q9BYQ7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC12.77□□□□□ -0.37
KRTAP4-1Q9BYQ7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
KRTAP4-1Q9BYQ7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
KRTAP4-1Q9BYQ7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
KRTAP4-1Q9BYQ7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC12.76□□□□□ -0.37
KRTAP4-1Q9BYQ7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC12.76□□□□□ -0.37
KRTAP4-1Q9BYQ7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC12.76□□□□□ -0.37
KRTAP4-1Q9BYQ7 MIR4787-201ENST00000607364 84 ntBASIC12.76□□□□□ -0.37
KRTAP4-1Q9BYQ7 AC008406.3-201ENST00000620001 1374 ntBASIC12.76□□□□□ -0.37
KRTAP4-1Q9BYQ7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KRTAP4-1Q9BYQ7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KRTAP4-1Q9BYQ7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
KRTAP4-1Q9BYQ7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
KRTAP4-1Q9BYQ7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KRTAP4-1Q9BYQ7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC12.75□□□□□ -0.37
KRTAP4-1Q9BYQ7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
KRTAP4-1Q9BYQ7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC12.75□□□□□ -0.37
KRTAP4-1Q9BYQ7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
KRTAP4-1Q9BYQ7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC12.75□□□□□ -0.37
KRTAP4-1Q9BYQ7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
KRTAP4-1Q9BYQ7 AL449106.1-201ENST00000608517 1980 ntBASIC12.75□□□□□ -0.37
KRTAP4-1Q9BYQ7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
KRTAP4-1Q9BYQ7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
KRTAP4-1Q9BYQ7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
KRTAP4-1Q9BYQ7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC12.74□□□□□ -0.37
KRTAP4-1Q9BYQ7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
KRTAP4-1Q9BYQ7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
KRTAP4-1Q9BYQ7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
KRTAP4-1Q9BYQ7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
KRTAP4-1Q9BYQ7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
KRTAP4-1Q9BYQ7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC12.74□□□□□ -0.37
KRTAP4-1Q9BYQ7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC12.74□□□□□ -0.37
KRTAP4-1Q9BYQ7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
KRTAP4-1Q9BYQ7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC12.74□□□□□ -0.37
KRTAP4-1Q9BYQ7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
KRTAP4-1Q9BYQ7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
KRTAP4-1Q9BYQ7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC12.73□□□□□ -0.37
KRTAP4-1Q9BYQ7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
KRTAP4-1Q9BYQ7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
KRTAP4-1Q9BYQ7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
KRTAP4-1Q9BYQ7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
KRTAP4-1Q9BYQ7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
KRTAP4-1Q9BYQ7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
KRTAP4-1Q9BYQ7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC12.73□□□□□ -0.37
KRTAP4-1Q9BYQ7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
KRTAP4-1Q9BYQ7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC12.73□□□□□ -0.37
KRTAP4-1Q9BYQ7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC12.73□□□□□ -0.37
KRTAP4-1Q9BYQ7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC12.73□□□□□ -0.37
KRTAP4-1Q9BYQ7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC12.73□□□□□ -0.37
KRTAP4-1Q9BYQ7 AC139426.1-201ENST00000568218 2529 ntBASIC12.73□□□□□ -0.37
KRTAP4-1Q9BYQ7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
KRTAP4-1Q9BYQ7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
KRTAP4-1Q9BYQ7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
KRTAP4-1Q9BYQ7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KRTAP4-1Q9BYQ7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KRTAP4-1Q9BYQ7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KRTAP4-1Q9BYQ7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KRTAP4-1Q9BYQ7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC12.72□□□□□ -0.37
KRTAP4-1Q9BYQ7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
KRTAP4-1Q9BYQ7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KRTAP4-1Q9BYQ7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC12.72□□□□□ -0.37
KRTAP4-1Q9BYQ7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC12.72□□□□□ -0.37
KRTAP4-1Q9BYQ7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
KRTAP4-1Q9BYQ7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KRTAP4-1Q9BYQ7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KRTAP4-1Q9BYQ7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
KRTAP4-1Q9BYQ7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
KRTAP4-1Q9BYQ7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC12.71□□□□□ -0.37
KRTAP4-1Q9BYQ7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KRTAP4-1Q9BYQ7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms