Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.03■□□□□ 0.8
SSX3Q99909 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.02■□□□□ 0.8
SSX3Q99909 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SSX3Q99909 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.02■□□□□ 0.8
SSX3Q99909 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SSX3Q99909 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SSX3Q99909 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSX3Q99909 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SSX3Q99909 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX3Q99909 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.01■□□□□ 0.79
SSX3Q99909 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.01■□□□□ 0.79
SSX3Q99909 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SSX3Q99909 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.01■□□□□ 0.79
SSX3Q99909 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
SSX3Q99909 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX3Q99909 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSX3Q99909 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSX3Q99909 AL157400.5-201ENST00000507624 621 ntBASIC20■□□□□ 0.79
SSX3Q99909 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSX3Q99909 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SSX3Q99909 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20■□□□□ 0.79
SSX3Q99909 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SSX3Q99909 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.99■□□□□ 0.79
SSX3Q99909 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSX3Q99909 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.99■□□□□ 0.79
SSX3Q99909 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SSX3Q99909 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX3Q99909 NTF6A-201ENST00000591175 560 ntBASIC19.98■□□□□ 0.79
SSX3Q99909 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.98■□□□□ 0.79
SSX3Q99909 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.97■□□□□ 0.79
SSX3Q99909 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SSX3Q99909 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSX3Q99909 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSX3Q99909 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSX3Q99909 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.97■□□□□ 0.79
SSX3Q99909 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.96■□□□□ 0.79
SSX3Q99909 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.96■□□□□ 0.79
SSX3Q99909 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSX3Q99909 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSX3Q99909 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSX3Q99909 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSX3Q99909 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SSX3Q99909 SMPD5-203ENST00000639008 1464 ntBASIC19.95■□□□□ 0.78
SSX3Q99909 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSX3Q99909 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.95■□□□□ 0.78
SSX3Q99909 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSX3Q99909 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SSX3Q99909 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSX3Q99909 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSX3Q99909 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSX3Q99909 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SSX3Q99909 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSX3Q99909 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.94■□□□□ 0.78
SSX3Q99909 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.94■□□□□ 0.78
SSX3Q99909 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SSX3Q99909 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.94■□□□□ 0.78
SSX3Q99909 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSX3Q99909 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSX3Q99909 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SSX3Q99909 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.93■□□□□ 0.78
SSX3Q99909 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SSX3Q99909 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSX3Q99909 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.93■□□□□ 0.78
SSX3Q99909 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
SSX3Q99909 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SSX3Q99909 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSX3Q99909 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSX3Q99909 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SSX3Q99909 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.92■□□□□ 0.78
SSX3Q99909 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSX3Q99909 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSX3Q99909 WHAMMP3-201ENST00000611636 1609 ntBASIC19.91■□□□□ 0.78
SSX3Q99909 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSX3Q99909 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSX3Q99909 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.91■□□□□ 0.78
SSX3Q99909 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSX3Q99909 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSX3Q99909 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.91■□□□□ 0.78
SSX3Q99909 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SSX3Q99909 U85056.1-201ENST00000616429 682 ntBASIC19.91■□□□□ 0.78
SSX3Q99909 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SSX3Q99909 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSX3Q99909 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SSX3Q99909 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSX3Q99909 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.9■□□□□ 0.78
SSX3Q99909 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SSX3Q99909 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX3Q99909 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX3Q99909 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX3Q99909 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX3Q99909 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX3Q99909 AC007029.1-201ENST00000604183 313 ntBASIC19.9■□□□□ 0.78
SSX3Q99909 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SSX3Q99909 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SSX3Q99909 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX3Q99909 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX3Q99909 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX3Q99909 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SSX3Q99909 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SSX3Q99909 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms