Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC097639.1-201ENST00000565519 1891 ntBASIC21.83■■□□□ 1.08
CROCCP3Q8IVE0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CROCCP3Q8IVE0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CROCCP3Q8IVE0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CROCCP3Q8IVE0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CROCCP3Q8IVE0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CROCCP3Q8IVE0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.81■■□□□ 1.08
CROCCP3Q8IVE0 WHAMMP3-201ENST00000611636 1609 ntBASIC21.81■■□□□ 1.08
CROCCP3Q8IVE0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CROCCP3Q8IVE0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CROCCP3Q8IVE0 AC022211.4-201ENST00000625094 2161 ntBASIC21.81■■□□□ 1.08
CROCCP3Q8IVE0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CROCCP3Q8IVE0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CROCCP3Q8IVE0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
CROCCP3Q8IVE0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.8■■□□□ 1.08
CROCCP3Q8IVE0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.8■■□□□ 1.08
CROCCP3Q8IVE0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CROCCP3Q8IVE0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CROCCP3Q8IVE0 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CROCCP3Q8IVE0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CROCCP3Q8IVE0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CROCCP3Q8IVE0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CROCCP3Q8IVE0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CROCCP3Q8IVE0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CROCCP3Q8IVE0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.79■■□□□ 1.08
CROCCP3Q8IVE0 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CROCCP3Q8IVE0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.79■■□□□ 1.08
CROCCP3Q8IVE0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CROCCP3Q8IVE0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CROCCP3Q8IVE0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CROCCP3Q8IVE0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.79■■□□□ 1.08
CROCCP3Q8IVE0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
CROCCP3Q8IVE0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CROCCP3Q8IVE0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CROCCP3Q8IVE0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CROCCP3Q8IVE0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CROCCP3Q8IVE0 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CROCCP3Q8IVE0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
CROCCP3Q8IVE0 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CROCCP3Q8IVE0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.77■■□□□ 1.08
CROCCP3Q8IVE0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CROCCP3Q8IVE0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CROCCP3Q8IVE0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.77■■□□□ 1.08
CROCCP3Q8IVE0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CROCCP3Q8IVE0 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.77■■□□□ 1.08
CROCCP3Q8IVE0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.76■■□□□ 1.07
CROCCP3Q8IVE0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.76■■□□□ 1.07
CROCCP3Q8IVE0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CROCCP3Q8IVE0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CROCCP3Q8IVE0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.75■■□□□ 1.07
CROCCP3Q8IVE0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CROCCP3Q8IVE0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.75■■□□□ 1.07
CROCCP3Q8IVE0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CROCCP3Q8IVE0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CROCCP3Q8IVE0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.75■■□□□ 1.07
CROCCP3Q8IVE0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CROCCP3Q8IVE0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CROCCP3Q8IVE0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CROCCP3Q8IVE0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CROCCP3Q8IVE0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CROCCP3Q8IVE0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CROCCP3Q8IVE0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CROCCP3Q8IVE0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CROCCP3Q8IVE0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CROCCP3Q8IVE0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CROCCP3Q8IVE0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CROCCP3Q8IVE0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.73■■□□□ 1.07
CROCCP3Q8IVE0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CROCCP3Q8IVE0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CROCCP3Q8IVE0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.73■■□□□ 1.07
CROCCP3Q8IVE0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CROCCP3Q8IVE0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CROCCP3Q8IVE0 AL117328.2-201ENST00000624617 1940 ntBASIC21.72■■□□□ 1.07
CROCCP3Q8IVE0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CROCCP3Q8IVE0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CROCCP3Q8IVE0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CROCCP3Q8IVE0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CROCCP3Q8IVE0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.72■■□□□ 1.07
CROCCP3Q8IVE0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CROCCP3Q8IVE0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
CROCCP3Q8IVE0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CROCCP3Q8IVE0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CROCCP3Q8IVE0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CROCCP3Q8IVE0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CROCCP3Q8IVE0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CROCCP3Q8IVE0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CROCCP3Q8IVE0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CROCCP3Q8IVE0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
CROCCP3Q8IVE0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.7■■□□□ 1.06
CROCCP3Q8IVE0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CROCCP3Q8IVE0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CROCCP3Q8IVE0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CROCCP3Q8IVE0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.7■■□□□ 1.06
CROCCP3Q8IVE0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CROCCP3Q8IVE0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CROCCP3Q8IVE0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
CROCCP3Q8IVE0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CROCCP3Q8IVE0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CROCCP3Q8IVE0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.69■■□□□ 1.06
CROCCP3Q8IVE0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms