Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PDS5AQ29RF7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC29.41■■■□□ 2.3
PDS5AQ29RF7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
PDS5AQ29RF7 PVT1_1.1-201ENST00000615125 194 ntBASIC29.41■■■□□ 2.3
PDS5AQ29RF7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
PDS5AQ29RF7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PDS5AQ29RF7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC29.4■■■□□ 2.3
PDS5AQ29RF7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PDS5AQ29RF7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PDS5AQ29RF7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
PDS5AQ29RF7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC29.39■■■□□ 2.3
PDS5AQ29RF7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC29.39■■■□□ 2.3
PDS5AQ29RF7 RPS2P7-201ENST00000447334 885 ntBASIC29.39■■■□□ 2.3
PDS5AQ29RF7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
PDS5AQ29RF7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
PDS5AQ29RF7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
PDS5AQ29RF7 KRT18P10-201ENST00000388836 1287 ntBASIC29.38■■■□□ 2.29
PDS5AQ29RF7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC29.38■■■□□ 2.29
PDS5AQ29RF7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
PDS5AQ29RF7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
PDS5AQ29RF7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
PDS5AQ29RF7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
PDS5AQ29RF7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC29.37■■■□□ 2.29
PDS5AQ29RF7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
PDS5AQ29RF7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
PDS5AQ29RF7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
PDS5AQ29RF7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC29.36■■■□□ 2.29
PDS5AQ29RF7 AC103834.1-201ENST00000520383 144 ntBASIC29.36■■■□□ 2.29
PDS5AQ29RF7 MIR4508-201ENST00000584178 70 ntBASIC29.36■■■□□ 2.29
PDS5AQ29RF7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC29.35■■■□□ 2.29
PDS5AQ29RF7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PDS5AQ29RF7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PDS5AQ29RF7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
PDS5AQ29RF7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
PDS5AQ29RF7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
PDS5AQ29RF7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PDS5AQ29RF7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC29.33■■■□□ 2.29
PDS5AQ29RF7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PDS5AQ29RF7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
PDS5AQ29RF7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC29.33■■■□□ 2.29
PDS5AQ29RF7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
PDS5AQ29RF7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PDS5AQ29RF7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
PDS5AQ29RF7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PDS5AQ29RF7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
PDS5AQ29RF7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
PDS5AQ29RF7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PDS5AQ29RF7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PDS5AQ29RF7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
PDS5AQ29RF7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
PDS5AQ29RF7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC29.31■■■□□ 2.28
PDS5AQ29RF7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC29.31■■■□□ 2.28
PDS5AQ29RF7 LONRF2P2-201ENST00000439212 571 ntBASIC29.3■■■□□ 2.28
PDS5AQ29RF7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PDS5AQ29RF7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC29.29■■■□□ 2.28
PDS5AQ29RF7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
PDS5AQ29RF7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
PDS5AQ29RF7 AL451085.2-201ENST00000605085 799 ntBASIC29.28■■■□□ 2.28
PDS5AQ29RF7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
PDS5AQ29RF7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC29.28■■■□□ 2.28
PDS5AQ29RF7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
PDS5AQ29RF7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PDS5AQ29RF7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PDS5AQ29RF7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PDS5AQ29RF7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
PDS5AQ29RF7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
PDS5AQ29RF7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PDS5AQ29RF7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
PDS5AQ29RF7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
PDS5AQ29RF7 YBX1P4-201ENST00000392794 808 ntBASIC29.25■■■□□ 2.27
PDS5AQ29RF7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC29.25■■■□□ 2.27
PDS5AQ29RF7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PDS5AQ29RF7 KRT8P33-201ENST00000508125 1423 ntBASIC29.25■■■□□ 2.27
PDS5AQ29RF7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC29.25■■■□□ 2.27
PDS5AQ29RF7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
PDS5AQ29RF7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC29.24■■■□□ 2.27
PDS5AQ29RF7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
PDS5AQ29RF7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PDS5AQ29RF7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PDS5AQ29RF7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
PDS5AQ29RF7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC29.23■■■□□ 2.27
PDS5AQ29RF7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC29.23■■■□□ 2.27
PDS5AQ29RF7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
PDS5AQ29RF7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
PDS5AQ29RF7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
PDS5AQ29RF7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC29.22■■■□□ 2.27
PDS5AQ29RF7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
PDS5AQ29RF7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
PDS5AQ29RF7 AL035685.1-201ENST00000636663 812 ntBASIC29.21■■■□□ 2.27
PDS5AQ29RF7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
PDS5AQ29RF7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PDS5AQ29RF7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC29.21■■■□□ 2.27
PDS5AQ29RF7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PDS5AQ29RF7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC29.2■■■□□ 2.27
PDS5AQ29RF7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
PDS5AQ29RF7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC29.2■■■□□ 2.27
PDS5AQ29RF7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.27
PDS5AQ29RF7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC29.2■■■□□ 2.26
PDS5AQ29RF7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
PDS5AQ29RF7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC29.2■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms