Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC15.48■□□□□ 0.078e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC15.48■□□□□ 0.078e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.078e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-212ENST00000480614 12167 ntTSL 1 (best)12.67□□□□□ -0.388e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-214ENST00000493786 551 ntTSL 29.93□□□□□ -0.828e-7■□□□□ 10.9
HNRNPUQ00839 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC6.78□□□□□ -1.322e-30■□□□□ 10.9
HNRNPUQ00839 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.725e-6■□□□□ 10.8
HNRNPUQ00839 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.595e-6■□□□□ 10.8
HNRNPUQ00839 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.835e-6■□□□□ 10.8
HNRNPUQ00839 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.845e-6■□□□□ 10.8
HNRNPUQ00839 TGFBR3-209ENST00000532540 3913 ntTSL 1 (best)9.15□□□□□ -0.945e-6■□□□□ 10.8
HNRNPUQ00839 TGFBR3-210ENST00000533089 6455 ntTSL 1 (best)9.15□□□□□ -0.945e-6■□□□□ 10.8
HNRNPUQ00839 NFE2L1-206ENST00000577431 583 ntTSL 523.75■■□□□ 1.391e-6■□□□□ 10.8
HNRNPUQ00839 HIF1A-206ENST00000553999 616 ntTSL 426.07■■□□□ 1.767e-6■□□□□ 10.8
HNRNPUQ00839 HIF1A-211ENST00000557446 559 ntTSL 525.24■■□□□ 1.637e-6■□□□□ 10.8
HNRNPUQ00839 SLC2A9-206ENST00000505104 1659 ntTSL 1 (best)23.05■■□□□ 1.287e-6■□□□□ 10.8
HNRNPUQ00839 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.077e-6■□□□□ 10.8
HNRNPUQ00839 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.017e-6■□□□□ 10.8
HNRNPUQ00839 SLC2A9-208ENST00000506583 1927 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.447e-6■□□□□ 10.8
HNRNPUQ00839 SLC2A9-209ENST00000506839 446 ntTSL 315.81■□□□□ 0.127e-6■□□□□ 10.8
HNRNPUQ00839 SLC2A9-207ENST00000505506 567 ntTSL 215.14■□□□□ 0.017e-6■□□□□ 10.8
HNRNPUQ00839 HIF1A-202ENST00000337138 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.147e-6■□□□□ 10.8
HNRNPUQ00839 HIF1A-203ENST00000394997 3922 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.157e-6■□□□□ 10.8
HNRNPUQ00839 SLC2A9-213ENST00000513129 738 ntTSL 313.33□□□□□ -0.287e-6■□□□□ 10.8
HNRNPUQ00839 HIF1A-210ENST00000557206 767 ntTSL 38.43□□□□□ -1.067e-6■□□□□ 10.8
HNRNPUQ00839 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.97□□□□□ -1.937e-6■□□□□ 10.8
HNRNPUQ00839 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.8□□□□□ -1.967e-6■□□□□ 10.8
HNRNPUQ00839 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.75□□□□□ -2.137e-6■□□□□ 10.8
HNRNPUQ00839 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.244e-7■□□□□ 10.8
HNRNPUQ00839 MAPK1-203ENST00000491588 491 ntTSL 26.44□□□□□ -1.384e-7■□□□□ 10.8
HNRNPUQ00839 LINC00511-207ENST00000580175 436 ntTSL 39.64□□□□□ -0.878e-6■□□□□ 10.8
HNRNPUQ00839 MAGI1-205ENST00000464060 2247 ntTSL 1 (best)32.62■■■□□ 2.818e-6■□□□□ 10.7
HNRNPUQ00839 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.328e-6■□□□□ 10.7
HNRNPUQ00839 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.188e-6■□□□□ 10.7
HNRNPUQ00839 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC22.17■■□□□ 1.148e-6■□□□□ 10.7
HNRNPUQ00839 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.778e-6■□□□□ 10.7
HNRNPUQ00839 MAGI1-IT1-201ENST00000460754 2567 ntTSL 2 BASIC12.08□□□□□ -0.488e-6■□□□□ 10.7
HNRNPUQ00839 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.334e-8■□□□□ 10.7
HNRNPUQ00839 CBFA2T3-204ENST00000563640 664 ntTSL 219.77■□□□□ 0.765e-12■□□□□ 10.7
HNRNPUQ00839 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.745e-12■□□□□ 10.7
HNRNPUQ00839 CBFA2T3-211ENST00000570046 284 ntTSL 312.43□□□□□ -0.425e-12■□□□□ 10.7
HNRNPUQ00839 MEG8-220ENST00000636052 1369 ntTSL 5 BASIC14.82□□□□□ -0.042e-6■□□□□ 10.7
HNRNPUQ00839 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC29.11■■■□□ 2.251e-5■□□□□ 10.6
HNRNPUQ00839 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.241e-5■□□□□ 10.6
HNRNPUQ00839 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.231e-5■□□□□ 10.6
HNRNPUQ00839 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.231e-5■□□□□ 10.6
HNRNPUQ00839 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.131e-5■□□□□ 10.6
HNRNPUQ00839 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.111e-5■□□□□ 10.6
HNRNPUQ00839 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC28.13■■■□□ 2.091e-5■□□□□ 10.6
HNRNPUQ00839 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.041e-5■□□□□ 10.6
HNRNPUQ00839 PPM1H-203ENST00000548414 522 ntTSL 326.57■■□□□ 1.841e-5■□□□□ 10.6
HNRNPUQ00839 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC25.33■■□□□ 1.651e-5■□□□□ 10.6
HNRNPUQ00839 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC24.66■■□□□ 1.541e-5■□□□□ 10.6
HNRNPUQ00839 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC24.04■■□□□ 1.441e-5■□□□□ 10.6
HNRNPUQ00839 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.411e-5■□□□□ 10.6
HNRNPUQ00839 ELOVL5-202ENST00000370913 580 ntTSL 1 (best) BASIC16.48■□□□□ 0.233e-6■□□□□ 10.6
HNRNPUQ00839 ELOVL5-204ENST00000465983 696 ntTSL 316.01■□□□□ 0.153e-6■□□□□ 10.6
HNRNPUQ00839 ELOVL5-206ENST00000486973 794 ntTSL 315.72■□□□□ 0.113e-6■□□□□ 10.6
HNRNPUQ00839 ELOVL5-205ENST00000485336 761 ntTSL 511.17□□□□□ -0.623e-6■□□□□ 10.6
HNRNPUQ00839 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC11.14□□□□□ -0.633e-6■□□□□ 10.6
HNRNPUQ00839 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC9.29□□□□□ -0.923e-6■□□□□ 10.6
HNRNPUQ00839 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.953e-6■□□□□ 10.6
HNRNPUQ00839 SMAD3-212ENST00000559937 579 ntTSL 411.1□□□□□ -0.632e-6■□□□□ 10.6
HNRNPUQ00839 SMAD3-211ENST00000559460 568 ntTSL 410.9□□□□□ -0.662e-6■□□□□ 10.6
HNRNPUQ00839 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.81e-6■□□□□ 10.6
HNRNPUQ00839 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC24.04■■□□□ 1.446e-9■□□□□ 10.5
HNRNPUQ00839 CTTN-204ENST00000393747 1315 ntTSL 522.35■■□□□ 1.176e-9■□□□□ 10.5
HNRNPUQ00839 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.916e-9■□□□□ 10.5
HNRNPUQ00839 CTTN-212ENST00000527962 587 ntTSL 219.07■□□□□ 0.646e-9■□□□□ 10.5
HNRNPUQ00839 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.646e-9■□□□□ 10.5
HNRNPUQ00839 CTTN-210ENST00000525852 1470 ntTSL 515.88■□□□□ 0.136e-9■□□□□ 10.5
HNRNPUQ00839 CTTN-208ENST00000498223 523 ntTSL 315□□□□□ -0.016e-9■□□□□ 10.5
HNRNPUQ00839 SCARB1-209ENST00000545305 851 ntTSL 218.39■□□□□ 0.538e-7■□□□□ 10.5
HNRNPUQ00839 CERS4-203ENST00000558268 713 ntTSL 332.22■■■□□ 2.756e-8■□□□□ 10.5
HNRNPUQ00839 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC29.27■■■□□ 2.286e-8■□□□□ 10.5
HNRNPUQ00839 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC27.62■■■□□ 2.016e-8■□□□□ 10.5
HNRNPUQ00839 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.956e-8■□□□□ 10.5
HNRNPUQ00839 CERS4-210ENST00000559490 420 ntTSL 527.22■■□□□ 1.956e-8■□□□□ 10.5
HNRNPUQ00839 CERS4-214ENST00000595722 1826 ntTSL 1 (best)26.6■■□□□ 1.856e-8■□□□□ 10.5
HNRNPUQ00839 CERS4-213ENST00000561053 768 ntTSL 525.39■■□□□ 1.666e-8■□□□□ 10.5
HNRNPUQ00839 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.616e-8■□□□□ 10.5
HNRNPUQ00839 CERS4-211ENST00000560412 568 ntTSL 422.06■■□□□ 1.126e-8■□□□□ 10.5
HNRNPUQ00839 CERS4-206ENST00000558501 873 ntTSL 521.71■■□□□ 1.076e-8■□□□□ 10.5
HNRNPUQ00839 CERS4-212ENST00000561008 531 ntTSL 418.88■□□□□ 0.616e-8■□□□□ 10.5
HNRNPUQ00839 CERS4-207ENST00000558877 758 ntTSL 316.73■□□□□ 0.276e-8■□□□□ 10.5
HNRNPUQ00839 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC18.79■□□□□ 0.61e-7■□□□□ 10.5
HNRNPUQ00839 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.461e-7■□□□□ 10.5
HNRNPUQ00839 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC17.21■□□□□ 0.351e-7■□□□□ 10.5
HNRNPUQ00839 CDC45-208ENST00000471470 857 ntTSL 516.65■□□□□ 0.261e-7■□□□□ 10.5
HNRNPUQ00839 CDC45-203ENST00000407835 2090 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.011e-7■□□□□ 10.5
HNRNPUQ00839 CAPRIN2-213ENST00000542550 770 ntTSL 332.95■■■□□ 2.872e-10■□□□□ 10.4
HNRNPUQ00839 CAPRIN2-211ENST00000540584 569 ntTSL 428.02■■■□□ 2.082e-10■□□□□ 10.4
HNRNPUQ00839 CAPRIN2-212ENST00000541765 630 ntTSL 528.02■■■□□ 2.082e-10■□□□□ 10.4
HNRNPUQ00839 CAPRIN2-210ENST00000540436 557 ntTSL 326.68■■□□□ 1.862e-10■□□□□ 10.4
HNRNPUQ00839 CAPRIN2-215ENST00000546129 501 ntTSL 425.4■■□□□ 1.662e-10■□□□□ 10.4
HNRNPUQ00839 CAPRIN2-207ENST00000537108 2187 ntTSL 58.11□□□□□ -1.112e-10■□□□□ 10.4
HNRNPUQ00839 CAPRIN2-206ENST00000534897 478 ntTSL 45.19□□□□□ -1.582e-10■□□□□ 10.4
HNRNPUQ00839 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.14■□□□□ 0.492e-6■□□□□ 10.4
HNRNPUQ00839 AC087380.1-204ENST00000418729 1026 ntTSL 1 (best)15.42■□□□□ 0.062e-6■□□□□ 10.4
HNRNPUQ00839 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC14.98□□□□□ -0.012e-6■□□□□ 10.4
Retrieved 100 of 2,288 protein–RNA pairs in 98 ms