RNA–Protein interactions for RNA: ENST00000542550.5

CAPRIN2-213, Transcript of caprin family member 2, humanhuman

TSL 3

Gene CAPRIN2, Length 770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2-213ENST00000542550 NISCHQ9Y2I1 1504 aa64.42■■■■■ 7.9
CAPRIN2-213ENST00000542550 CCDC180Q9P1Z9 1646 aa57.39■■■■■ 6.78
CAPRIN2-213ENST00000542550 ABCC9O60706 1549 aa56.94■■■■■ 6.71
CAPRIN2-213ENST00000542550 RB1CC1Q8TDY2 1594 aa54.39■■■■■ 6.3
CAPRIN2-213ENST00000542550 DCAF8L2P0C7V8 631 aa54.33■■■■■ 6.29
CAPRIN2-213ENST00000542550 NACADO15069 1562 aa54.17■■■■■ 6.26
CAPRIN2-213ENST00000542550 MYO15BQ96JP2 1530 aa53.61■■■■■ 6.17
CAPRIN2-213ENST00000542550 ZCCHC6Q5VYS8 1495 aaKnown RBP53.52■■■■■ 6.16
CAPRIN2-213ENST00000542550 PABPN1Q86U42 306 aaKnown RBP eCLIP53.21■■■■■ 6.11
CAPRIN2-213ENST00000542550 DCAF1Q9Y4B6 1507 aa53.18■■■■■ 6.1
CAPRIN2-213ENST00000542550 UNC13AQ9UPW8 1703 aa53.05■■■■■ 6.08
CAPRIN2-213ENST00000542550 DNAJC5BQ9UF47 199 aa52.84■■■■■ 6.05
CAPRIN2-213ENST00000542550 BICRAQ9NZM4 1560 aa52.76■■■■■ 6.04
CAPRIN2-213ENST00000542550 SCRIBQ14160 1630 aa52.48■■■■■ 5.99
CAPRIN2-213ENST00000542550 SHROOM4Q9ULL8 1493 aa52.08■■■■■ 5.93
CAPRIN2-213ENST00000542550 EIF4G1Q04637 1599 aaKnown RBP51.45■■■■■ 5.83
CAPRIN2-213ENST00000542550 CC2D2AQ9P2K1 1620 aa51.38■■■■■ 5.82
CAPRIN2-213ENST00000542550 CECR2Q9BXF3 1484 aa51.2■■■■■ 5.79
CAPRIN2-213ENST00000542550 SMARCA4P51532 1647 aa50.07■■■■■ 5.61
CAPRIN2-213ENST00000542550 NCAPD3P42695 1498 aa50.04■■■■■ 5.6
CAPRIN2-213ENST00000542550 ATAD2BQ9ULI0 1458 aa50.01■■■■■ 5.6
CAPRIN2-213ENST00000542550 BAZ1AQ9NRL2 1556 aaPredicted RBP49.95■■■■■ 5.59
CAPRIN2-213ENST00000542550 SMARCA2P51531 1590 aa49.87■■■■■ 5.57
CAPRIN2-213ENST00000542550 HMGXB3Q12766 1538 aa49.69■■■■■ 5.54
CAPRIN2-213ENST00000542550 MROH2BQ7Z745 1585 aa49.67■■■■■ 5.54
CAPRIN2-213ENST00000542550 BAZ1BQ9UIG0 1483 aaKnown RBP49.58■■■■■ 5.53
CAPRIN2-213ENST00000542550 PEG3Q9GZU2 1588 aa49.54■■■■■ 5.52
CAPRIN2-213ENST00000542550 ERCC6Q03468 1493 aa49.12■■■■■ 5.45
CAPRIN2-213ENST00000542550 NESP48681 1621 aa49.09■■■■■ 5.45
CAPRIN2-213ENST00000542550 WIZO95785 1651 aa49.08■■■■■ 5.45
CAPRIN2-213ENST00000542550 RSF1Q96T23 1441 aaPredicted RBP48.92■■■■■ 5.42
CAPRIN2-213ENST00000542550 LAMC3Q9Y6N6 1575 aa48.77■■■■■ 5.4
CAPRIN2-213ENST00000542550 CUX2O14529 1486 aa48.71■■■■■ 5.39
CAPRIN2-213ENST00000542550 CADPSQ9ULU8 1353 aa48.61■■■■■ 5.37
CAPRIN2-213ENST00000542550 PDS5BQ9NTI5 1447 aa48.55■■■■■ 5.36
CAPRIN2-213ENST00000542550 TOP2AP11388 1531 aaKnown RBP48.5■■■■■ 5.35
CAPRIN2-213ENST00000542550 KIF21AQ7Z4S6 1674 aa48.37■■■■■ 5.33
CAPRIN2-213ENST00000542550 THOC2Q8NI27 1593 aaKnown RBP48.34■■■■■ 5.33
CAPRIN2-213ENST00000542550 CFTRP13569 1480 aa48.16■■■■■ 5.3
CAPRIN2-213ENST00000542550 MRC2Q9UBG0 1479 aa48.07■■■■■ 5.29
CAPRIN2-213ENST00000542550 FANCD2Q9BXW9 1451 aa48.04■■■■■ 5.28
CAPRIN2-213ENST00000542550 CEP164Q9UPV0 1460 aa48.02■■■■■ 5.28
CAPRIN2-213ENST00000542550 CCDC88BA6NC98 1476 aa48.01■■■■■ 5.28
CAPRIN2-213ENST00000542550 DNAJC5Q9H3Z4 198 aa47.99■■■■■ 5.27
CAPRIN2-213ENST00000542550 WDR62O43379 1518 aa47.87■■■■■ 5.25
CAPRIN2-213ENST00000542550 URB2Q14146 1524 aaKnown RBP47.58■■■■■ 5.21
CAPRIN2-213ENST00000542550 PRDM2Q13029 1718 aa47.56■■■■■ 5.2
CAPRIN2-213ENST00000542550 SUPT5HO00267 1087 aaKnown RBP47.43■■■■■ 5.18
CAPRIN2-213ENST00000542550 TOPBP1Q92547 1522 aa47.19■■■■■ 5.14
CAPRIN2-213ENST00000542550 ABCC8Q09428 1581 aa47.11■■■■■ 5.13
CAPRIN2-213ENST00000542550 DNMBPQ6XZF7 1577 aa47.04■■■■■ 5.12
CAPRIN2-213ENST00000542550 IFT140Q96RY7 1462 aa47.03■■■■■ 5.12
CAPRIN2-213ENST00000542550 ZNF608Q9ULD9 1512 aaPredicted RBP46.91■■■■■ 5.1
CAPRIN2-213ENST00000542550 POLA1P09884 1462 aaPredicted RBP46.76■■■■■ 5.08
CAPRIN2-213ENST00000542550 OSCARQ8IYS5 282 aa46.73■■■■■ 5.07
CAPRIN2-213ENST00000542550 TARBP1Q13395 1621 aaKnown RBP46.65■■■■■ 5.06
CAPRIN2-213ENST00000542550 RAD54L2Q9Y4B4 1467 aa46.63■■■■■ 5.05
CAPRIN2-213ENST00000542550 CUX1P39880 1505 aa46.62■■■■■ 5.05
CAPRIN2-213ENST00000542550 EIF4G3O43432 1585 aaKnown RBP46.61■■■■■ 5.05
CAPRIN2-213ENST00000542550 AQRO60306 1485 aaKnown RBP eCLIP46.61■■■■■ 5.051e-6■□□□□ 9.3
CAPRIN2-213ENST00000542550 SOGA1O94964 1423 aa46.61■■■■■ 5.05
CAPRIN2-213ENST00000542550 FGD5Q6ZNL6 1462 aa46.57■■■■■ 5.05
CAPRIN2-213ENST00000542550 TDRD9Q8NDG6 1382 aaKnown RBP46.46■■■■■ 5.03
CAPRIN2-213ENST00000542550 TRIM41Q8WV44 630 aa46.29■■■■■ 5
CAPRIN2-213ENST00000542550 FBLN2P98095 1184 aa46.27■■■■■ 5
CAPRIN2-213ENST00000542550 WDR97A6NE52 1622 aa46.18■■■■■ 4.98
CAPRIN2-213ENST00000542550 WRNQ14191 1432 aaPredicted RBP eCLIP46.14■■■■■ 4.98
CAPRIN2-213ENST00000542550 SNAPC4Q5SXM2 1469 aa46.12■■■■■ 4.97
CAPRIN2-213ENST00000542550 CHD1O14646 1710 aa46.1■■■■■ 4.97
CAPRIN2-213ENST00000542550 GRIN2BQ13224 1484 aa46.09■■■■■ 4.97
CAPRIN2-213ENST00000542550 ABCA10Q8WWZ4 1543 aa46.05■■■■■ 4.96
CAPRIN2-213ENST00000542550 GAPVD1Q14C86 1478 aa46.03■■■■■ 4.96
CAPRIN2-213ENST00000542550 TOP2BQ02880 1626 aa46.02■■■■■ 4.96
CAPRIN2-213ENST00000542550 SYNJ1O43426 1573 aa46.01■■■■■ 4.96
CAPRIN2-213ENST00000542550 CHMP7Q8WUX9 453 aaPredicted RBP46■■■■■ 4.95
CAPRIN2-213ENST00000542550 MAGI1Q96QZ7 1491 aaPredicted RBP45.99■■■■■ 4.95
CAPRIN2-213ENST00000542550 BIVM-ERCC5R4GMW8 1640 aa45.97■■■■■ 4.95
CAPRIN2-213ENST00000542550 RIMBP3CA6NJZ7 1639 aa45.91■■■■■ 4.94
CAPRIN2-213ENST00000542550 RIMBP3BA6NNM3 1639 aa45.91■■■■■ 4.94
CAPRIN2-213ENST00000542550 RIMBP3Q9UFD9 1639 aa45.91■■■■■ 4.94
CAPRIN2-213ENST00000542550 ARHGEF11O15085 1522 aa45.87■■■■■ 4.93
CAPRIN2-213ENST00000542550 ABCA5Q8WWZ7 1642 aa45.87■■■■■ 4.93
CAPRIN2-213ENST00000542550 PBRM1Q86U86 1689 aa45.85■■■■■ 4.93
CAPRIN2-213ENST00000542550 SYNJ2O15056 1496 aa45.84■■■■■ 4.93
CAPRIN2-213ENST00000542550 CYB5RLQ6IPT4 315 aa45.63■■■■■ 4.9
CAPRIN2-213ENST00000542550 CLASP1Q7Z460 1538 aa45.62■■■■■ 4.89
CAPRIN2-213ENST00000542550 ADAMTS12P58397 1594 aa45.5■■■■■ 4.87
CAPRIN2-213ENST00000542550 GRIN2AQ12879 1464 aa45.48■■■■■ 4.87
CAPRIN2-213ENST00000542550 ARAP1Q96P48 1450 aa45.48■■■■■ 4.87
CAPRIN2-213ENST00000542550 ERICH3Q5RHP9 1530 aa45.47■■■■■ 4.87
CAPRIN2-213ENST00000542550 FHAD1B1AJZ9 1412 aa45.46■■■■■ 4.87
CAPRIN2-213ENST00000542550 NUP160Q12769 1436 aa45.29■■■■■ 4.84
CAPRIN2-213ENST00000542550 CEP170Q5SW79 1584 aa45.26■■■■■ 4.84
CAPRIN2-213ENST00000542550 KIF27Q86VH2 1401 aa45.23■■■■■ 4.83
CAPRIN2-213ENST00000542550 IGF1RP08069 1367 aa45.14■■■■■ 4.82
CAPRIN2-213ENST00000542550 ERCC6L2Q5T890 1561 aa45.02■■■■■ 4.8
CAPRIN2-213ENST00000542550 TRHP20396 242 aaPredicted RBP44.94■■■■■ 4.78
CAPRIN2-213ENST00000542550 SHROOM2Q13796 1616 aa44.93■■■■■ 4.78
CAPRIN2-213ENST00000542550 JPH4Q96JJ6 628 aa44.93■■■■■ 4.78
CAPRIN2-213ENST00000542550 CUL7Q14999 1698 aa44.91■■■■■ 4.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms