RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 NISCHQ9Y2I1 1504 aa12.2□□□□□ -0.46
TGFBR3-207ENST00000525962 SUPT5HO00267 1087 aaKnown RBP12□□□□□ -0.49
TGFBR3-207ENST00000525962 DCAF8L2P0C7V8 631 aa12□□□□□ -0.49
TGFBR3-207ENST00000525962 SHROOM4Q9ULL8 1493 aa11.95□□□□□ -0.5
TGFBR3-207ENST00000525962 EHMT2Q96KQ7 1210 aa11.64□□□□□ -0.55
TGFBR3-207ENST00000525962 PCGF6Q9BYE7 350 aa11.57□□□□□ -0.56
TGFBR3-207ENST00000525962 PPARGC1BQ86YN6 1023 aaKnown RBP11.37□□□□□ -0.59
TGFBR3-207ENST00000525962 FAM9AQ8IZU1 332 aaPredicted RBP11.3□□□□□ -0.6
TGFBR3-207ENST00000525962 TTBK1Q5TCY1 1321 aaPredicted RBP11.24□□□□□ -0.61
TGFBR3-207ENST00000525962 LOC105371045A0A1W2PR82 267 aa11.19□□□□□ -0.62
TGFBR3-207ENST00000525962 HRCP23327 699 aa11.19□□□□□ -0.62
TGFBR3-207ENST00000525962 CHIC1Q5VXU3 224 aa11.07□□□□□ -0.64
TGFBR3-207ENST00000525962 CCDC180Q9P1Z9 1646 aa11.03□□□□□ -0.64
TGFBR3-207ENST00000525962 PELP1Q8IZL8 1130 aaKnown RBP10.88□□□□□ -0.67
TGFBR3-207ENST00000525962 TRIM41Q8WV44 630 aa10.88□□□□□ -0.67
TGFBR3-207ENST00000525962 YTHDC1Q96MU7 727 aaKnown RBP10.88□□□□□ -0.67
TGFBR3-207ENST00000525962 CCER1Q8TC90 406 aaPredicted RBP10.86□□□□□ -0.67
TGFBR3-207ENST00000525962 RANGAP1P46060 587 aaPredicted RBP10.85□□□□□ -0.67
TGFBR3-207ENST00000525962 TRIM26Q12899 539 aaPredicted RBP10.84□□□□□ -0.67
TGFBR3-207ENST00000525962 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.77□□□□□ -0.69
TGFBR3-207ENST00000525962 MYT1Q01538 1121 aa10.75□□□□□ -0.69
TGFBR3-207ENST00000525962 MYO15BQ96JP2 1530 aa10.71□□□□□ -0.69
TGFBR3-207ENST00000525962 ZEB1P37275 1124 aaPredicted RBP10.69□□□□□ -0.7
TGFBR3-207ENST00000525962 CENPBP07199 599 aaPredicted RBP10.64□□□□□ -0.71
TGFBR3-207ENST00000525962 UBTFP17480 764 aaKnown RBP10.59□□□□□ -0.71
TGFBR3-207ENST00000525962 GTF3C3Q9Y5Q9 886 aa10.58□□□□□ -0.72
TGFBR3-207ENST00000525962 SCAF1Q9H7N4 1312 aaKnown RBP10.57□□□□□ -0.72
TGFBR3-207ENST00000525962 HNRNPUL2Q1KMD3 747 aaKnown RBP10.55□□□□□ -0.72
TGFBR3-207ENST00000525962 DIEXFQ68CQ4 756 aaKnown RBP10.53□□□□□ -0.72
TGFBR3-207ENST00000525962 APLP2Q06481 763 aa10.51□□□□□ -0.73
TGFBR3-207ENST00000525962 NEUROD1Q13562 356 aa10.47□□□□□ -0.73
TGFBR3-207ENST00000525962 ITGAEP38570 1179 aa10.43□□□□□ -0.74
TGFBR3-207ENST00000525962 ACIN1Q9UKV3 1341 aaKnown RBP10.41□□□□□ -0.74
TGFBR3-207ENST00000525962 ATP1B4Q9UN42 357 aaPredicted RBP10.37□□□□□ -0.75
TGFBR3-207ENST00000525962 BCANQ96GW7 911 aa10.34□□□□□ -0.75
TGFBR3-207ENST00000525962 CNGB1Q14028 1251 aaPredicted RBP10.28□□□□□ -0.76
TGFBR3-207ENST00000525962 DCAF1Q9Y4B6 1507 aa10.27□□□□□ -0.76
TGFBR3-207ENST00000525962 UNC13AQ9UPW8 1703 aa10.25□□□□□ -0.77
TGFBR3-207ENST00000525962 ERICH6Q7L0X2 663 aa10.24□□□□□ -0.77
TGFBR3-207ENST00000525962 ZNF316A6NFI3 1004 aaPredicted RBP10.22□□□□□ -0.77
TGFBR3-207ENST00000525962 MIER1Q8N108 512 aa10.21□□□□□ -0.78
TGFBR3-207ENST00000525962 ZCCHC6Q5VYS8 1495 aaKnown RBP10.2□□□□□ -0.78
TGFBR3-207ENST00000525962 NEFLP07196 543 aa10.16□□□□□ -0.78
TGFBR3-207ENST00000525962 PABPN1Q86U42 306 aaKnown RBP eCLIP10.14□□□□□ -0.79
TGFBR3-207ENST00000525962 ABCC9O60706 1549 aa10.09□□□□□ -0.79
TGFBR3-207ENST00000525962 HIRIP3Q9BW71 556 aaPredicted RBP10.07□□□□□ -0.8
TGFBR3-207ENST00000525962 POLR3GLQ9BT43 218 aa10.06□□□□□ -0.8
TGFBR3-207ENST00000525962 CSRNP3Q8WYN3 585 aa10.04□□□□□ -0.8
TGFBR3-207ENST00000525962 SCRIBQ14160 1630 aa10.02□□□□□ -0.81
TGFBR3-207ENST00000525962 FAM50AQ14320 339 aaKnown RBP10.01□□□□□ -0.81
TGFBR3-207ENST00000525962 NACADO15069 1562 aa9.99□□□□□ -0.81
TGFBR3-207ENST00000525962 FKBP8Q14318 412 aa9.99□□□□□ -0.81
TGFBR3-207ENST00000525962 TRIM52Q96A61 297 aa9.99□□□□□ -0.81
TGFBR3-207ENST00000525962 RSF1Q96T23 1441 aaPredicted RBP9.98□□□□□ -0.81
TGFBR3-207ENST00000525962 P3H3Q8IVL6 736 aa9.98□□□□□ -0.81
TGFBR3-207ENST00000525962 DDX10Q13206 875 aaKnown RBP9.97□□□□□ -0.81
TGFBR3-207ENST00000525962 IRX6P78412 446 aaPredicted RBP9.96□□□□□ -0.81
TGFBR3-207ENST00000525962 SENP3-EIF4A1A0A087X0R7 540 aa9.96□□□□□ -0.82
TGFBR3-207ENST00000525962 BICRAQ9NZM4 1560 aa9.92□□□□□ -0.82
TGFBR3-207ENST00000525962 ARID3CA6NKF2 412 aa9.89□□□□□ -0.83
TGFBR3-207ENST00000525962 KCNH8Q96L42 1107 aa9.86□□□□□ -0.83
TGFBR3-207ENST00000525962 CEP162Q5TB80 1403 aa9.86□□□□□ -0.83
TGFBR3-207ENST00000525962 CECR2Q9BXF3 1484 aa9.86□□□□□ -0.83
TGFBR3-207ENST00000525962 RB1CC1Q8TDY2 1594 aa9.85□□□□□ -0.83
TGFBR3-207ENST00000525962 SUPT16HQ9Y5B9 1047 aaKnown RBP9.85□□□□□ -0.83
TGFBR3-207ENST00000525962 ANP32CO43423 234 aa9.83□□□□□ -0.84
TGFBR3-207ENST00000525962 SOGA1O94964 1423 aa9.82□□□□□ -0.84
TGFBR3-207ENST00000525962 ZNF326Q5BKZ1 582 aaKnown RBP9.81□□□□□ -0.84
TGFBR3-207ENST00000525962 HNRNPUQ00839 825 aaKnown RBP eCLIP9.79□□□□□ -0.845e-6■□□□□ 10.8
TGFBR3-207ENST00000525962 SIN3AQ96ST3 1273 aa9.79□□□□□ -0.84
TGFBR3-207ENST00000525962 NBR1Q14596 966 aa9.77□□□□□ -0.85
TGFBR3-207ENST00000525962 CDK11AQ9UQ88 783 aaPredicted RBP9.76□□□□□ -0.85
TGFBR3-207ENST00000525962 FAM9BQ8IZU0 186 aa9.76□□□□□ -0.85
TGFBR3-207ENST00000525962 SALL2Q9Y467 1007 aaPredicted RBP9.75□□□□□ -0.85
TGFBR3-207ENST00000525962 CLIP1P30622 1438 aa9.74□□□□□ -0.85
TGFBR3-207ENST00000525962 ANP32EQ9BTT0 268 aa9.74□□□□□ -0.85
TGFBR3-207ENST00000525962 NPM2Q86SE8 214 aaKnown RBP9.73□□□□□ -0.85
TGFBR3-207ENST00000525962 TSHZ2Q9NRE2 1034 aa9.73□□□□□ -0.85
TGFBR3-207ENST00000525962 ABCC8Q09428 1581 aa9.73□□□□□ -0.85
TGFBR3-207ENST00000525962 CCDC88BA6NC98 1476 aa9.72□□□□□ -0.85
TGFBR3-207ENST00000525962 KANK4Q5T7N3 995 aaPredicted RBP9.72□□□□□ -0.85
TGFBR3-207ENST00000525962 CHIC2Q9UKJ5 165 aa9.72□□□□□ -0.85
TGFBR3-207ENST00000525962 RTL5Q5HYW3 569 aaPredicted RBP9.71□□□□□ -0.86
TGFBR3-207ENST00000525962 RUSC2Q8N2Y8 1516 aa9.68□□□□□ -0.86
TGFBR3-207ENST00000525962 BCL11AQ9H165 835 aa9.68□□□□□ -0.86
TGFBR3-207ENST00000525962 DAXXQ9UER7 740 aaPredicted RBP9.68□□□□□ -0.86
TGFBR3-207ENST00000525962 MROH2BQ7Z745 1585 aa9.67□□□□□ -0.86
TGFBR3-207ENST00000525962 TNIKQ9UKE5 1360 aa9.66□□□□□ -0.86
TGFBR3-207ENST00000525962 RBM19Q9Y4C8 960 aaKnown RBP9.64□□□□□ -0.87
TGFBR3-207ENST00000525962 B4GALNT3Q6L9W6 998 aa9.61□□□□□ -0.87
TGFBR3-207ENST00000525962 TONSLQ96HA7 1378 aa9.61□□□□□ -0.87
TGFBR3-207ENST00000525962 RTN4Q9NQC3 1192 aaKnown RBP9.6□□□□□ -0.87
TGFBR3-207ENST00000525962 RRP7BPQ9NSQ0 103 aa9.6□□□□□ -0.87
TGFBR3-207ENST00000525962 GOLGA3Q08378 1498 aa9.6□□□□□ -0.87
TGFBR3-207ENST00000525962 MRS2Q9HD23 443 aa9.59□□□□□ -0.87
TGFBR3-207ENST00000525962 CLSPNQ9HAW4 1339 aa9.59□□□□□ -0.87
TGFBR3-207ENST00000525962 PEG3Q9GZU2 1588 aa9.58□□□□□ -0.88
TGFBR3-207ENST00000525962 WRNQ14191 1432 aaPredicted RBP eCLIP9.58□□□□□ -0.88
TGFBR3-207ENST00000525962 WIZO95785 1651 aa9.56□□□□□ -0.88
TGFBR3-207ENST00000525962 ZNF777Q9ULD5 760 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms