RNA–Protein interactions for RNA: ENST00000548414.5

PPM1H-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1H, humanhuman

TSL 3

Gene PPM1H, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1H-203ENST00000548414 NISCHQ9Y2I1 1504 aa50.71■■■■■ 5.71
PPM1H-203ENST00000548414 CCDC180Q9P1Z9 1646 aa45.11■■■■■ 4.81
PPM1H-203ENST00000548414 ABCC9O60706 1549 aa44.29■■■■■ 4.68
PPM1H-203ENST00000548414 RB1CC1Q8TDY2 1594 aa42.56■■■■■ 4.4
PPM1H-203ENST00000548414 DCAF8L2P0C7V8 631 aa42.52■■■■■ 4.4
PPM1H-203ENST00000548414 NACADO15069 1562 aa42.48■■■■■ 4.39
PPM1H-203ENST00000548414 ZCCHC6Q5VYS8 1495 aaKnown RBP42.2■■■■■ 4.35
PPM1H-203ENST00000548414 MYO15BQ96JP2 1530 aa42.17■■■■■ 4.34
PPM1H-203ENST00000548414 DCAF1Q9Y4B6 1507 aa41.95■■■■■ 4.31
PPM1H-203ENST00000548414 UNC13AQ9UPW8 1703 aa41.49■■■■■ 4.23
PPM1H-203ENST00000548414 PABPN1Q86U42 306 aaKnown RBP eCLIP41.39■■■■■ 4.22
PPM1H-203ENST00000548414 BICRAQ9NZM4 1560 aa41.21■■■■■ 4.19
PPM1H-203ENST00000548414 SCRIBQ14160 1630 aa41.17■■■■■ 4.18
PPM1H-203ENST00000548414 SHROOM4Q9ULL8 1493 aa40.83■■■■■ 4.13
PPM1H-203ENST00000548414 DNAJC5BQ9UF47 199 aa40.73■■■■■ 4.11
PPM1H-203ENST00000548414 EIF4G1Q04637 1599 aaKnown RBP40.17■■■■■ 4.02
PPM1H-203ENST00000548414 CC2D2AQ9P2K1 1620 aa40.02■■■■■ 4
PPM1H-203ENST00000548414 CECR2Q9BXF3 1484 aa39.81■■■■□ 3.96
PPM1H-203ENST00000548414 SMARCA4P51532 1647 aa39.36■■■■□ 3.89
PPM1H-203ENST00000548414 BAZ1AQ9NRL2 1556 aaPredicted RBP39.33■■■■□ 3.89
PPM1H-203ENST00000548414 NCAPD3P42695 1498 aa39.19■■■■□ 3.86
PPM1H-203ENST00000548414 ATAD2BQ9ULI0 1458 aa39.19■■■■□ 3.86
PPM1H-203ENST00000548414 SMARCA2P51531 1590 aa39.16■■■■□ 3.86
PPM1H-203ENST00000548414 MROH2BQ7Z745 1585 aa39.07■■■■□ 3.84
PPM1H-203ENST00000548414 HMGXB3Q12766 1538 aa38.98■■■■□ 3.83
PPM1H-203ENST00000548414 PEG3Q9GZU2 1588 aa38.96■■■■□ 3.83
PPM1H-203ENST00000548414 BAZ1BQ9UIG0 1483 aaKnown RBP38.89■■■■□ 3.82
PPM1H-203ENST00000548414 WIZO95785 1651 aa38.63■■■■□ 3.77
PPM1H-203ENST00000548414 RSF1Q96T23 1441 aaPredicted RBP38.6■■■■□ 3.77
PPM1H-203ENST00000548414 NESP48681 1621 aa38.27■■■■□ 3.72
PPM1H-203ENST00000548414 TOP2AP11388 1531 aaKnown RBP38.23■■■■□ 3.71
PPM1H-203ENST00000548414 ERCC6Q03468 1493 aa38.22■■■■□ 3.71
PPM1H-203ENST00000548414 LAMC3Q9Y6N6 1575 aa38.17■■■■□ 3.7
PPM1H-203ENST00000548414 CADPSQ9ULU8 1353 aa38.06■■■■□ 3.68
PPM1H-203ENST00000548414 PDS5BQ9NTI5 1447 aa37.97■■■■□ 3.67
PPM1H-203ENST00000548414 CUX2O14529 1486 aa37.83■■■■□ 3.65
PPM1H-203ENST00000548414 CCDC88BA6NC98 1476 aa37.79■■■■□ 3.64
PPM1H-203ENST00000548414 CFTRP13569 1480 aa37.79■■■■□ 3.64
PPM1H-203ENST00000548414 KIF21AQ7Z4S6 1674 aa37.79■■■■□ 3.64
PPM1H-203ENST00000548414 THOC2Q8NI27 1593 aaKnown RBP37.68■■■■□ 3.62
PPM1H-203ENST00000548414 FANCD2Q9BXW9 1451 aa37.62■■■■□ 3.61
PPM1H-203ENST00000548414 SUPT5HO00267 1087 aaKnown RBP37.61■■■■□ 3.61
PPM1H-203ENST00000548414 CEP164Q9UPV0 1460 aa37.59■■■■□ 3.61
PPM1H-203ENST00000548414 MRC2Q9UBG0 1479 aa37.56■■■■□ 3.6
PPM1H-203ENST00000548414 PRDM2Q13029 1718 aa37.45■■■■□ 3.59
PPM1H-203ENST00000548414 WDR62O43379 1518 aa37.41■■■■□ 3.58
PPM1H-203ENST00000548414 URB2Q14146 1524 aaKnown RBP37.22■■■■□ 3.55
PPM1H-203ENST00000548414 ABCC8Q09428 1581 aa37.03■■■■□ 3.52
PPM1H-203ENST00000548414 TOPBP1Q92547 1522 aa36.99■■■■□ 3.51
PPM1H-203ENST00000548414 DNMBPQ6XZF7 1577 aa36.94■■■■□ 3.5
PPM1H-203ENST00000548414 DNAJC5Q9H3Z4 198 aa36.82■■■■□ 3.48
PPM1H-203ENST00000548414 IFT140Q96RY7 1462 aa36.82■■■■□ 3.48
PPM1H-203ENST00000548414 POLA1P09884 1462 aaPredicted RBP36.67■■■■□ 3.46
PPM1H-203ENST00000548414 CUX1P39880 1505 aa36.65■■■■□ 3.46
PPM1H-203ENST00000548414 ZNF608Q9ULD9 1512 aaPredicted RBP36.62■■■■□ 3.45
PPM1H-203ENST00000548414 FGD5Q6ZNL6 1462 aa36.57■■■■□ 3.45
PPM1H-203ENST00000548414 TARBP1Q13395 1621 aaKnown RBP36.57■■■■□ 3.44
PPM1H-203ENST00000548414 SOGA1O94964 1423 aa36.55■■■■□ 3.44
PPM1H-203ENST00000548414 RAD54L2Q9Y4B4 1467 aa36.52■■■■□ 3.44
PPM1H-203ENST00000548414 EIF4G3O43432 1585 aaKnown RBP36.46■■■■□ 3.43
PPM1H-203ENST00000548414 AQRO60306 1485 aaKnown RBP eCLIP36.43■■■■□ 3.42
PPM1H-203ENST00000548414 WRNQ14191 1432 aaPredicted RBP eCLIP36.42■■■■□ 3.42
PPM1H-203ENST00000548414 TDRD9Q8NDG6 1382 aaKnown RBP36.36■■■■□ 3.41
PPM1H-203ENST00000548414 TOP2BQ02880 1626 aa36.32■■■■□ 3.4
PPM1H-203ENST00000548414 WDR97A6NE52 1622 aa36.3■■■■□ 3.4
PPM1H-203ENST00000548414 BIVM-ERCC5R4GMW8 1640 aa36.3■■■■□ 3.4
PPM1H-203ENST00000548414 SYNJ1O43426 1573 aa36.29■■■■□ 3.4
PPM1H-203ENST00000548414 OSCARQ8IYS5 282 aa36.29■■■■□ 3.4
PPM1H-203ENST00000548414 ABCA10Q8WWZ4 1543 aa36.21■■■■□ 3.39
PPM1H-203ENST00000548414 GRIN2BQ13224 1484 aa36.13■■■■□ 3.37
PPM1H-203ENST00000548414 GAPVD1Q14C86 1478 aa36.11■■■■□ 3.37
PPM1H-203ENST00000548414 SNAPC4Q5SXM2 1469 aa36.08■■■■□ 3.37
PPM1H-203ENST00000548414 FBLN2P98095 1184 aa36.08■■■■□ 3.37
PPM1H-203ENST00000548414 ABCA5Q8WWZ7 1642 aa36.04■■■■□ 3.36
PPM1H-203ENST00000548414 MAGI1Q96QZ7 1491 aaPredicted RBP36.04■■■■□ 3.36
PPM1H-203ENST00000548414 CHD1O14646 1710 aa36.01■■■■□ 3.36
PPM1H-203ENST00000548414 PBRM1Q86U86 1689 aa35.99■■■■□ 3.35
PPM1H-203ENST00000548414 CHMP7Q8WUX9 453 aaPredicted RBP35.96■■■■□ 3.35
PPM1H-203ENST00000548414 SYNJ2O15056 1496 aa35.91■■■■□ 3.34
PPM1H-203ENST00000548414 ERICH3Q5RHP9 1530 aa35.78■■■■□ 3.32
PPM1H-203ENST00000548414 ADAMTS12P58397 1594 aa35.72■■■■□ 3.31
PPM1H-203ENST00000548414 FHAD1B1AJZ9 1412 aa35.71■■■■□ 3.31
PPM1H-203ENST00000548414 KIF27Q86VH2 1401 aa35.69■■■■□ 3.3
PPM1H-203ENST00000548414 GRIN2AQ12879 1464 aa35.65■■■■□ 3.3
PPM1H-203ENST00000548414 ARHGEF11O15085 1522 aa35.64■■■■□ 3.3
PPM1H-203ENST00000548414 RIMBP3CA6NJZ7 1639 aa35.64■■■■□ 3.3
PPM1H-203ENST00000548414 RIMBP3BA6NNM3 1639 aa35.64■■■■□ 3.3
PPM1H-203ENST00000548414 RIMBP3Q9UFD9 1639 aa35.64■■■■□ 3.3
PPM1H-203ENST00000548414 CLASP1Q7Z460 1538 aa35.63■■■■□ 3.29
PPM1H-203ENST00000548414 TRIM41Q8WV44 630 aa35.6■■■■□ 3.29
PPM1H-203ENST00000548414 IGF1RP08069 1367 aa35.54■■■■□ 3.28
PPM1H-203ENST00000548414 NUP160Q12769 1436 aa35.49■■■■□ 3.27
PPM1H-203ENST00000548414 CEP170Q5SW79 1584 aa35.45■■■■□ 3.27
PPM1H-203ENST00000548414 CUL7Q14999 1698 aa35.43■■■■□ 3.26
PPM1H-203ENST00000548414 CYB5RLQ6IPT4 315 aa35.37■■■■□ 3.25
PPM1H-203ENST00000548414 CARMIL1Q5VZK9 1371 aa35.35■■■■□ 3.25
PPM1H-203ENST00000548414 ARAP1Q96P48 1450 aa35.34■■■■□ 3.25
PPM1H-203ENST00000548414 RUSC2Q8N2Y8 1516 aa35.27■■■■□ 3.24
PPM1H-203ENST00000548414 SHROOM2Q13796 1616 aa35.21■■■■□ 3.23
PPM1H-203ENST00000548414 JPH4Q96JJ6 628 aa35.18■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms