RNA–Protein interactions for RNA: ENST00000546129.1

CAPRIN2-215, Transcript of caprin family member 2, humanhuman

TSL 4

Gene CAPRIN2, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2-215ENST00000546129 NISCHQ9Y2I1 1504 aa52.76■■■■■ 6.04
CAPRIN2-215ENST00000546129 CCDC180Q9P1Z9 1646 aa47.54■■■■■ 5.2
CAPRIN2-215ENST00000546129 ABCC9O60706 1549 aa47.53■■■■■ 5.2
CAPRIN2-215ENST00000546129 RB1CC1Q8TDY2 1594 aa45.24■■■■■ 4.83
CAPRIN2-215ENST00000546129 NACADO15069 1562 aa44.88■■■■■ 4.78
CAPRIN2-215ENST00000546129 DNAJC5BQ9UF47 199 aa44.62■■■■■ 4.73
CAPRIN2-215ENST00000546129 DCAF8L2P0C7V8 631 aa44.49■■■■■ 4.71
CAPRIN2-215ENST00000546129 UNC13AQ9UPW8 1703 aa44.41■■■■■ 4.7
CAPRIN2-215ENST00000546129 MYO15BQ96JP2 1530 aa44.17■■■■■ 4.66
CAPRIN2-215ENST00000546129 PABPN1Q86U42 306 aaKnown RBP eCLIP44.15■■■■■ 4.66
CAPRIN2-215ENST00000546129 BICRAQ9NZM4 1560 aa43.93■■■■■ 4.62
CAPRIN2-215ENST00000546129 ZCCHC6Q5VYS8 1495 aaKnown RBP43.7■■■■■ 4.59
CAPRIN2-215ENST00000546129 DCAF1Q9Y4B6 1507 aa43.58■■■■■ 4.57
CAPRIN2-215ENST00000546129 SHROOM4Q9ULL8 1493 aa43.29■■■■■ 4.52
CAPRIN2-215ENST00000546129 SCRIBQ14160 1630 aa43.26■■■■■ 4.52
CAPRIN2-215ENST00000546129 CC2D2AQ9P2K1 1620 aa43■■■■■ 4.47
CAPRIN2-215ENST00000546129 EIF4G1Q04637 1599 aaKnown RBP42.86■■■■■ 4.45
CAPRIN2-215ENST00000546129 CECR2Q9BXF3 1484 aa42.82■■■■■ 4.45
CAPRIN2-215ENST00000546129 NCAPD3P42695 1498 aa41.36■■■■■ 4.21
CAPRIN2-215ENST00000546129 SMARCA4P51532 1647 aa41.25■■■■■ 4.19
CAPRIN2-215ENST00000546129 ATAD2BQ9ULI0 1458 aa41.22■■■■■ 4.19
CAPRIN2-215ENST00000546129 SMARCA2P51531 1590 aa41.16■■■■■ 4.18
CAPRIN2-215ENST00000546129 HMGXB3Q12766 1538 aa41.12■■■■■ 4.17
CAPRIN2-215ENST00000546129 DNAJC5Q9H3Z4 198 aa41.09■■■■■ 4.17
CAPRIN2-215ENST00000546129 ERCC6Q03468 1493 aa41.06■■■■■ 4.16
CAPRIN2-215ENST00000546129 CUX2O14529 1486 aa41.03■■■■■ 4.16
CAPRIN2-215ENST00000546129 BAZ1AQ9NRL2 1556 aaPredicted RBP40.99■■■■■ 4.15
CAPRIN2-215ENST00000546129 BAZ1BQ9UIG0 1483 aaKnown RBP40.85■■■■■ 4.13
CAPRIN2-215ENST00000546129 PEG3Q9GZU2 1588 aa40.82■■■■■ 4.13
CAPRIN2-215ENST00000546129 NESP48681 1621 aa40.8■■■■■ 4.12
CAPRIN2-215ENST00000546129 MROH2BQ7Z745 1585 aa40.65■■■■■ 4.1
CAPRIN2-215ENST00000546129 LAMC3Q9Y6N6 1575 aa40.55■■■■■ 4.08
CAPRIN2-215ENST00000546129 THOC2Q8NI27 1593 aaKnown RBP40.5■■■■■ 4.07
CAPRIN2-215ENST00000546129 KIF21AQ7Z4S6 1674 aa40.43■■■■■ 4.06
CAPRIN2-215ENST00000546129 WIZO95785 1651 aa40.24■■■■■ 4.03
CAPRIN2-215ENST00000546129 PDS5BQ9NTI5 1447 aa40.23■■■■■ 4.03
CAPRIN2-215ENST00000546129 CADPSQ9ULU8 1353 aa40.08■■■■■ 4.01
CAPRIN2-215ENST00000546129 MRC2Q9UBG0 1479 aa39.93■■■■□ 3.98
CAPRIN2-215ENST00000546129 WDR62O43379 1518 aa39.87■■■■□ 3.97
CAPRIN2-215ENST00000546129 CEP164Q9UPV0 1460 aa39.75■■■■□ 3.95
CAPRIN2-215ENST00000546129 RSF1Q96T23 1441 aaPredicted RBP39.7■■■■□ 3.95
CAPRIN2-215ENST00000546129 TOP2AP11388 1531 aaKnown RBP39.67■■■■□ 3.94
CAPRIN2-215ENST00000546129 FANCD2Q9BXW9 1451 aa39.67■■■■□ 3.94
CAPRIN2-215ENST00000546129 CFTRP13569 1480 aa39.62■■■■□ 3.93
CAPRIN2-215ENST00000546129 PRDM2Q13029 1718 aa39.5■■■■□ 3.91
CAPRIN2-215ENST00000546129 URB2Q14146 1524 aaKnown RBP39.37■■■■□ 3.89
CAPRIN2-215ENST00000546129 TRIM41Q8WV44 630 aa39.25■■■■□ 3.87
CAPRIN2-215ENST00000546129 CCDC88BA6NC98 1476 aa39.17■■■■□ 3.86
CAPRIN2-215ENST00000546129 OSCARQ8IYS5 282 aa39.05■■■■□ 3.84
CAPRIN2-215ENST00000546129 IFT140Q96RY7 1462 aa38.93■■■■□ 3.82
CAPRIN2-215ENST00000546129 TOPBP1Q92547 1522 aa38.92■■■■□ 3.82
CAPRIN2-215ENST00000546129 ZNF608Q9ULD9 1512 aaPredicted RBP38.89■■■■□ 3.82
CAPRIN2-215ENST00000546129 ABCC8Q09428 1581 aa38.82■■■■□ 3.8
CAPRIN2-215ENST00000546129 DNMBPQ6XZF7 1577 aa38.81■■■■□ 3.8
CAPRIN2-215ENST00000546129 EIF4G3O43432 1585 aaKnown RBP38.78■■■■□ 3.8
CAPRIN2-215ENST00000546129 RIMBP3CA6NJZ7 1639 aa38.73■■■■□ 3.79
CAPRIN2-215ENST00000546129 RIMBP3BA6NNM3 1639 aa38.73■■■■□ 3.79
CAPRIN2-215ENST00000546129 RIMBP3Q9UFD9 1639 aa38.73■■■■□ 3.79
CAPRIN2-215ENST00000546129 TARBP1Q13395 1621 aaKnown RBP38.65■■■■□ 3.78
CAPRIN2-215ENST00000546129 CHD1O14646 1710 aa38.6■■■■□ 3.77
CAPRIN2-215ENST00000546129 ARHGEF11O15085 1522 aa38.53■■■■□ 3.76
CAPRIN2-215ENST00000546129 POLA1P09884 1462 aaPredicted RBP38.51■■■■□ 3.76
CAPRIN2-215ENST00000546129 AQRO60306 1485 aaKnown RBP eCLIP38.49■■■■□ 3.751e-6■□□□□ 9.3
CAPRIN2-215ENST00000546129 RAD54L2Q9Y4B4 1467 aa38.35■■■■□ 3.73
CAPRIN2-215ENST00000546129 SOGA1O94964 1423 aa38.29■■■■□ 3.72
CAPRIN2-215ENST00000546129 FGD5Q6ZNL6 1462 aa38.26■■■■□ 3.72
CAPRIN2-215ENST00000546129 WDR97A6NE52 1622 aa38.25■■■■□ 3.71
CAPRIN2-215ENST00000546129 FBLN2P98095 1184 aa38.24■■■■□ 3.71
CAPRIN2-215ENST00000546129 TDRD9Q8NDG6 1382 aaKnown RBP38.21■■■■□ 3.71
CAPRIN2-215ENST00000546129 CUX1P39880 1505 aa38.21■■■■□ 3.71
CAPRIN2-215ENST00000546129 CYB5RLQ6IPT4 315 aa38.16■■■■□ 3.7
CAPRIN2-215ENST00000546129 SNAPC4Q5SXM2 1469 aa38.14■■■■□ 3.7
CAPRIN2-215ENST00000546129 ARAP1Q96P48 1450 aa38.12■■■■□ 3.69
CAPRIN2-215ENST00000546129 MAGI1Q96QZ7 1491 aaPredicted RBP38.03■■■■□ 3.68
CAPRIN2-215ENST00000546129 PBRM1Q86U86 1689 aa38.03■■■■□ 3.68
CAPRIN2-215ENST00000546129 CLASP1Q7Z460 1538 aa38.02■■■■□ 3.68
CAPRIN2-215ENST00000546129 GRIN2BQ13224 1484 aa38■■■■□ 3.67
CAPRIN2-215ENST00000546129 SYNJ1O43426 1573 aa38■■■■□ 3.67
CAPRIN2-215ENST00000546129 CHMP7Q8WUX9 453 aaPredicted RBP37.93■■■■□ 3.66
CAPRIN2-215ENST00000546129 SYNJ2O15056 1496 aa37.9■■■■□ 3.66
CAPRIN2-215ENST00000546129 GAPVD1Q14C86 1478 aa37.85■■■■□ 3.65
CAPRIN2-215ENST00000546129 ABCA5Q8WWZ7 1642 aa37.84■■■■□ 3.65
CAPRIN2-215ENST00000546129 ABCA10Q8WWZ4 1543 aa37.8■■■■□ 3.64
CAPRIN2-215ENST00000546129 SUPT5HO00267 1087 aaKnown RBP37.79■■■■□ 3.64
CAPRIN2-215ENST00000546129 TRHP20396 242 aaPredicted RBP37.79■■■■□ 3.64
CAPRIN2-215ENST00000546129 BIVM-ERCC5R4GMW8 1640 aa37.65■■■■□ 3.62
CAPRIN2-215ENST00000546129 TOP2BQ02880 1626 aa37.6■■■■□ 3.61
CAPRIN2-215ENST00000546129 WRNQ14191 1432 aaPredicted RBP eCLIP37.59■■■■□ 3.61
CAPRIN2-215ENST00000546129 ADAMTS12P58397 1594 aa37.55■■■■□ 3.6
CAPRIN2-215ENST00000546129 GRIN2AQ12879 1464 aa37.52■■■■□ 3.6
CAPRIN2-215ENST00000546129 CEP170Q5SW79 1584 aa37.45■■■■□ 3.59
CAPRIN2-215ENST00000546129 ERCC6L2Q5T890 1561 aa37.42■■■■□ 3.58
CAPRIN2-215ENST00000546129 NUP160Q12769 1436 aa37.38■■■■□ 3.57
CAPRIN2-215ENST00000546129 ERICH3Q5RHP9 1530 aa37.35■■■■□ 3.57
CAPRIN2-215ENST00000546129 FHAD1B1AJZ9 1412 aa37.35■■■■□ 3.57
CAPRIN2-215ENST00000546129 SHROOM2Q13796 1616 aa37.34■■■■□ 3.57
CAPRIN2-215ENST00000546129 RUSC2Q8N2Y8 1516 aa37.05■■■■□ 3.52
CAPRIN2-215ENST00000546129 PRG4Q92954 1404 aaPredicted RBP37.02■■■■□ 3.52
CAPRIN2-215ENST00000546129 KIF13AQ9H1H9 1805 aa37.01■■■■□ 3.51
CAPRIN2-215ENST00000546129 JPH4Q96JJ6 628 aa36.94■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms