Protein–RNA interactions for Protein: O95551

TDP2, Tyrosyl-DNA phosphodiesterase 2, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2O95551 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
TDP2O95551 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC27.52■■■□□ 2
TDP2O95551 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC27.52■■■□□ 2
TDP2O95551 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TDP2O95551 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.52■■■□□ 2
TDP2O95551 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC27.52■■■□□ 2
TDP2O95551 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC27.51■■■□□ 2
TDP2O95551 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■■□□ 2
TDP2O95551 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
TDP2O95551 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
TDP2O95551 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TDP2O95551 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.51■■□□□ 1.99
TDP2O95551 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
TDP2O95551 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.5■■□□□ 1.99
TDP2O95551 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
TDP2O95551 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
TDP2O95551 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
TDP2O95551 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
TDP2O95551 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
TDP2O95551 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
TDP2O95551 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
TDP2O95551 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
TDP2O95551 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
TDP2O95551 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TDP2O95551 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TDP2O95551 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
TDP2O95551 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC27.48■■□□□ 1.99
TDP2O95551 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC27.48■■□□□ 1.99
TDP2O95551 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC27.48■■□□□ 1.99
TDP2O95551 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
TDP2O95551 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
TDP2O95551 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
TDP2O95551 SPCS2P3-201ENST00000500401 656 ntBASIC27.47■■□□□ 1.99
TDP2O95551 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TDP2O95551 ERN1-208ENST00000606895 2068 ntBASIC27.47■■□□□ 1.99
TDP2O95551 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TDP2O95551 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TDP2O95551 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
TDP2O95551 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC27.46■■□□□ 1.99
TDP2O95551 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC27.46■■□□□ 1.99
TDP2O95551 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
TDP2O95551 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
TDP2O95551 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC27.45■■□□□ 1.99
TDP2O95551 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.98
TDP2O95551 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.98
TDP2O95551 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
TDP2O95551 AC092803.2-201ENST00000564287 1899 ntBASIC27.44■■□□□ 1.98
TDP2O95551 AC129492.7-201ENST00000622992 756 ntBASIC27.44■■□□□ 1.98
TDP2O95551 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
TDP2O95551 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC27.43■■□□□ 1.98
TDP2O95551 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC27.43■■□□□ 1.98
TDP2O95551 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
TDP2O95551 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
TDP2O95551 AC091060.1-201ENST00000623524 1766 ntBASIC27.43■■□□□ 1.98
TDP2O95551 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
TDP2O95551 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
TDP2O95551 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
TDP2O95551 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
TDP2O95551 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
TDP2O95551 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TDP2O95551 DUX4L9-201ENST00000449051 1259 ntBASIC27.41■■□□□ 1.98
TDP2O95551 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC27.41■■□□□ 1.98
TDP2O95551 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TDP2O95551 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TDP2O95551 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TDP2O95551 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
TDP2O95551 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC27.4■■□□□ 1.98
TDP2O95551 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TDP2O95551 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TDP2O95551 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC27.4■■□□□ 1.98
TDP2O95551 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.4■■□□□ 1.98
TDP2O95551 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.4■■□□□ 1.98
TDP2O95551 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TDP2O95551 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.4■■□□□ 1.98
TDP2O95551 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TDP2O95551 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
TDP2O95551 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.97
TDP2O95551 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
TDP2O95551 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
TDP2O95551 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
TDP2O95551 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC27.38■■□□□ 1.97
TDP2O95551 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TDP2O95551 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC27.38■■□□□ 1.97
TDP2O95551 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC27.38■■□□□ 1.97
TDP2O95551 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
TDP2O95551 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.37■■□□□ 1.97
TDP2O95551 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TDP2O95551 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TDP2O95551 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
TDP2O95551 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TDP2O95551 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TDP2O95551 AC004987.1-201ENST00000428627 508 ntBASIC27.36■■□□□ 1.97
TDP2O95551 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TDP2O95551 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC27.36■■□□□ 1.97
TDP2O95551 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
TDP2O95551 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
TDP2O95551 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TDP2O95551 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.35■■□□□ 1.97
TDP2O95551 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC27.35■■□□□ 1.97
TDP2O95551 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms