Protein–RNA interactions for Protein: O95551

TDP2, Tyrosyl-DNA phosphodiesterase 2, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2O95551 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC38.94■■■■□ 3.82
TDP2O95551 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC38.34■■■■□ 3.73
TDP2O95551 AL356512.1-201ENST00000607453 1739 ntBASIC37.87■■■■□ 3.65
TDP2O95551 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC37.85■■■■□ 3.65
TDP2O95551 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC37.69■■■■□ 3.62
TDP2O95551 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
TDP2O95551 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC37.36■■■■□ 3.57
TDP2O95551 HES6-203ENST00000409160 1600 ntTSL 2 BASIC37.21■■■■□ 3.55
TDP2O95551 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC36.95■■■■□ 3.51
TDP2O95551 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC36.85■■■■□ 3.49
TDP2O95551 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC36.65■■■■□ 3.46
TDP2O95551 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC36.64■■■■□ 3.46
TDP2O95551 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC36.6■■■■□ 3.45
TDP2O95551 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC36.37■■■■□ 3.41
TDP2O95551 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
TDP2O95551 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC36.12■■■■□ 3.37
TDP2O95551 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC35.95■■■■□ 3.35
TDP2O95551 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC35.91■■■■□ 3.34
TDP2O95551 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC35.89■■■■□ 3.34
TDP2O95551 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC35.73■■■■□ 3.31
TDP2O95551 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC35.66■■■■□ 3.3
TDP2O95551 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC35.54■■■■□ 3.28
TDP2O95551 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC35.31■■■■□ 3.24
TDP2O95551 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
TDP2O95551 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC35.25■■■■□ 3.23
TDP2O95551 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
TDP2O95551 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC35.17■■■■□ 3.22
TDP2O95551 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC35.11■■■■□ 3.21
TDP2O95551 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
TDP2O95551 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
TDP2O95551 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC34.92■■■■□ 3.18
TDP2O95551 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC34.87■■■■□ 3.17
TDP2O95551 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
TDP2O95551 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
TDP2O95551 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC34.8■■■■□ 3.16
TDP2O95551 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC34.75■■■■□ 3.15
TDP2O95551 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
TDP2O95551 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
TDP2O95551 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
TDP2O95551 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC34.67■■■■□ 3.14
TDP2O95551 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC34.63■■■■□ 3.13
TDP2O95551 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
TDP2O95551 INO80B-203ENST00000409917 796 ntTSL 2 BASIC34.6■■■■□ 3.13
TDP2O95551 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC34.55■■■■□ 3.12
TDP2O95551 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
TDP2O95551 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC34.38■■■■□ 3.09
TDP2O95551 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
TDP2O95551 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC34.31■■■■□ 3.08
TDP2O95551 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC34.2■■■■□ 3.07
TDP2O95551 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC34.19■■■■□ 3.06
TDP2O95551 AC015813.7-201ENST00000623294 581 ntBASIC34.17■■■■□ 3.06
TDP2O95551 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
TDP2O95551 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
TDP2O95551 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
TDP2O95551 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
TDP2O95551 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC33.84■■■■□ 3.01
TDP2O95551 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33.83■■■■□ 3.01
TDP2O95551 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
TDP2O95551 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.82■■■■□ 3
TDP2O95551 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.81■■■■□ 3
TDP2O95551 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
TDP2O95551 ILK-212ENST00000532063 1617 ntTSL 2 BASIC33.71■■■□□ 2.99
TDP2O95551 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
TDP2O95551 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33.67■■■□□ 2.98
TDP2O95551 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
TDP2O95551 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
TDP2O95551 AC006077.2-201ENST00000623591 457 ntBASIC33.61■■■□□ 2.97
TDP2O95551 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
TDP2O95551 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC33.57■■■□□ 2.96
TDP2O95551 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
TDP2O95551 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
TDP2O95551 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC33.52■■■□□ 2.96
TDP2O95551 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
TDP2O95551 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC33.47■■■□□ 2.95
TDP2O95551 ZNRF2P1-201ENST00000441407 443 ntBASIC33.47■■■□□ 2.95
TDP2O95551 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
TDP2O95551 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
TDP2O95551 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC33.34■■■□□ 2.93
TDP2O95551 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC33.32■■■□□ 2.92
TDP2O95551 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
TDP2O95551 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC33.26■■■□□ 2.92
TDP2O95551 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC33.24■■■□□ 2.91
TDP2O95551 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
TDP2O95551 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC33.2■■■□□ 2.91
TDP2O95551 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
TDP2O95551 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC33.14■■■□□ 2.9
TDP2O95551 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
TDP2O95551 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC33.12■■■□□ 2.89
TDP2O95551 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
TDP2O95551 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC33.06■■■□□ 2.88
TDP2O95551 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC33.03■■■□□ 2.88
TDP2O95551 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
TDP2O95551 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC32.99■■■□□ 2.87
TDP2O95551 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
TDP2O95551 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.96■■■□□ 2.87
TDP2O95551 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.95■■■□□ 2.86
TDP2O95551 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC32.94■■■□□ 2.86
TDP2O95551 AC145285.7-201ENST00000614819 1539 ntBASIC32.92■■■□□ 2.86
TDP2O95551 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
TDP2O95551 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC32.89■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms