Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.45■□□□□ 0.86
SHOXO15266 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SHOXO15266 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.44■□□□□ 0.86
SHOXO15266 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.44■□□□□ 0.86
SHOXO15266 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHOXO15266 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.44■□□□□ 0.86
SHOXO15266 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.44■□□□□ 0.86
SHOXO15266 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.44■□□□□ 0.86
SHOXO15266 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.44■□□□□ 0.86
SHOXO15266 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHOXO15266 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SHOXO15266 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHOXO15266 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.43■□□□□ 0.86
SHOXO15266 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHOXO15266 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHOXO15266 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHOXO15266 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHOXO15266 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHOXO15266 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHOXO15266 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHOXO15266 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHOXO15266 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.42■□□□□ 0.86
SHOXO15266 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.42■□□□□ 0.86
SHOXO15266 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHOXO15266 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHOXO15266 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SHOXO15266 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHOXO15266 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.41■□□□□ 0.86
SHOXO15266 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SHOXO15266 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.41■□□□□ 0.86
SHOXO15266 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHOXO15266 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHOXO15266 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SHOXO15266 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SHOXO15266 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SHOXO15266 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.39■□□□□ 0.86
SHOXO15266 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.39■□□□□ 0.86
SHOXO15266 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
SHOXO15266 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
SHOXO15266 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SHOXO15266 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.39■□□□□ 0.85
SHOXO15266 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHOXO15266 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SHOXO15266 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SHOXO15266 DUSP8P4-201ENST00000399538 1761 ntBASIC20.38■□□□□ 0.85
SHOXO15266 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SHOXO15266 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHOXO15266 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHOXO15266 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHOXO15266 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHOXO15266 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHOXO15266 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.37■□□□□ 0.85
SHOXO15266 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHOXO15266 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHOXO15266 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHOXO15266 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.36■□□□□ 0.85
SHOXO15266 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHOXO15266 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHOXO15266 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHOXO15266 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHOXO15266 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHOXO15266 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHOXO15266 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SHOXO15266 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.35■□□□□ 0.85
SHOXO15266 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.35■□□□□ 0.85
SHOXO15266 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHOXO15266 DUX4L29-201ENST00000425409 679 ntBASIC20.35■□□□□ 0.85
SHOXO15266 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SHOXO15266 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SHOXO15266 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.35■□□□□ 0.85
SHOXO15266 AC018358.1-201ENST00000631079 1402 ntBASIC20.35■□□□□ 0.85
SHOXO15266 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHOXO15266 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHOXO15266 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SHOXO15266 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHOXO15266 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SHOXO15266 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SHOXO15266 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SHOXO15266 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHOXO15266 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHOXO15266 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.33■□□□□ 0.84
SHOXO15266 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHOXO15266 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHOXO15266 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SHOXO15266 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.32■□□□□ 0.84
SHOXO15266 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.32■□□□□ 0.84
SHOXO15266 AC021231.2-201ENST00000594613 730 ntBASIC20.32■□□□□ 0.84
SHOXO15266 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SHOXO15266 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHOXO15266 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHOXO15266 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHOXO15266 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHOXO15266 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHOXO15266 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.31■□□□□ 0.84
SHOXO15266 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHOXO15266 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SHOXO15266 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHOXO15266 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHOXO15266 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SHOXO15266 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms