Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 FAM220CP-201ENST00000395253 831 ntBASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
KHDC1Q4VXA5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 AC132008.2-207ENST00000454517 770 ntBASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms