Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.18□□□□□ -0.3
TCRAP04437 AC098590.1-201ENST00000468126 897 ntBASIC13.18□□□□□ -0.3
TCRAP04437 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC13.18□□□□□ -0.3
TCRAP04437 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.18□□□□□ -0.3
TCRAP04437 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.18□□□□□ -0.3
TCRAP04437 Z99916.2-201ENST00000604037 246 ntBASIC13.18□□□□□ -0.3
TCRAP04437 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.18□□□□□ -0.3
TCRAP04437 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.18□□□□□ -0.3
TCRAP04437 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.18□□□□□ -0.3
TCRAP04437 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.18□□□□□ -0.3
TCRAP04437 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.18□□□□□ -0.3
TCRAP04437 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.18□□□□□ -0.3
TCRAP04437 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TCRAP04437 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.18□□□□□ -0.3
TCRAP04437 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.18□□□□□ -0.3
TCRAP04437 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.18□□□□□ -0.3
TCRAP04437 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
TCRAP04437 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRAP04437 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRAP04437 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.17□□□□□ -0.3
TCRAP04437 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRAP04437 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TCRAP04437 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRAP04437 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.17□□□□□ -0.3
TCRAP04437 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.17□□□□□ -0.3
TCRAP04437 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRAP04437 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.17□□□□□ -0.3
TCRAP04437 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.17□□□□□ -0.3
TCRAP04437 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.17□□□□□ -0.3
TCRAP04437 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.17□□□□□ -0.3
TCRAP04437 AL513523.2-202ENST00000427283 2040 ntBASIC13.17□□□□□ -0.3
TCRAP04437 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TCRAP04437 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRAP04437 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRAP04437 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRAP04437 KRT18P48-201ENST00000434763 852 ntBASIC13.17□□□□□ -0.3
TCRAP04437 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.17□□□□□ -0.3
TCRAP04437 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.17□□□□□ -0.3
TCRAP04437 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TCRAP04437 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.17□□□□□ -0.3
TCRAP04437 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC13.17□□□□□ -0.3
TCRAP04437 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.17□□□□□ -0.3
TCRAP04437 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.17□□□□□ -0.3
TCRAP04437 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TCRAP04437 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRAP04437 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.17□□□□□ -0.3
TCRAP04437 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
TCRAP04437 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TCRAP04437 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRAP04437 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRAP04437 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRAP04437 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRAP04437 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRAP04437 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TCRAP04437 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TCRAP04437 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TCRAP04437 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.17□□□□□ -0.3
TCRAP04437 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TCRAP04437 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TCRAP04437 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TCRAP04437 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.16□□□□□ -0.3
TCRAP04437 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TCRAP04437 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.16□□□□□ -0.3
TCRAP04437 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
TCRAP04437 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TCRAP04437 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TCRAP04437 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.16□□□□□ -0.3
TCRAP04437 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TCRAP04437 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.16□□□□□ -0.3
TCRAP04437 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TCRAP04437 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.16□□□□□ -0.3
TCRAP04437 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.16□□□□□ -0.3
TCRAP04437 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.16□□□□□ -0.3
TCRAP04437 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TCRAP04437 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TCRAP04437 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.16□□□□□ -0.3
TCRAP04437 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TCRAP04437 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.16□□□□□ -0.3
TCRAP04437 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.16□□□□□ -0.3
TCRAP04437 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TCRAP04437 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
TCRAP04437 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.16□□□□□ -0.3
TCRAP04437 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms