RNA–Protein interactions for RNA: ENST00000434763.1

KRT18P48-201, Transcript of keratin 18 pseudogene 48, humanhuman

BASIC

Gene KRT18P48, Length 852 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P48-201ENST00000434763 NISCHQ9Y2I1 1504 aa45.81■■■■■ 4.92
KRT18P48-201ENST00000434763 ABCC9O60706 1549 aa41.66■■■■■ 4.26
KRT18P48-201ENST00000434763 CCDC180Q9P1Z9 1646 aa41.33■■■■■ 4.21
KRT18P48-201ENST00000434763 RB1CC1Q8TDY2 1594 aa39.52■■■■□ 3.92
KRT18P48-201ENST00000434763 DNAJC5BQ9UF47 199 aa39.39■■■■□ 3.9
KRT18P48-201ENST00000434763 NACADO15069 1562 aa39.14■■■■□ 3.86
KRT18P48-201ENST00000434763 DCAF8L2P0C7V8 631 aa38.81■■■■□ 3.8
KRT18P48-201ENST00000434763 PABPN1Q86U42 306 aaKnown RBP eCLIP38.69■■■■□ 3.78
KRT18P48-201ENST00000434763 UNC13AQ9UPW8 1703 aa38.64■■■■□ 3.78
KRT18P48-201ENST00000434763 MYO15BQ96JP2 1530 aa38.48■■■■□ 3.75
KRT18P48-201ENST00000434763 BICRAQ9NZM4 1560 aa38.36■■■■□ 3.73
KRT18P48-201ENST00000434763 ZCCHC6Q5VYS8 1495 aaKnown RBP37.88■■■■□ 3.65
KRT18P48-201ENST00000434763 SHROOM4Q9ULL8 1493 aa37.84■■■■□ 3.65
KRT18P48-201ENST00000434763 DCAF1Q9Y4B6 1507 aa37.83■■■■□ 3.65
KRT18P48-201ENST00000434763 CC2D2AQ9P2K1 1620 aa37.64■■■■□ 3.62
KRT18P48-201ENST00000434763 SCRIBQ14160 1630 aa37.59■■■■□ 3.61
KRT18P48-201ENST00000434763 CECR2Q9BXF3 1484 aa37.58■■■■□ 3.61
KRT18P48-201ENST00000434763 EIF4G1Q04637 1599 aaKnown RBP37.46■■■■□ 3.59
KRT18P48-201ENST00000434763 DNAJC5Q9H3Z4 198 aa36.51■■■■□ 3.44
KRT18P48-201ENST00000434763 NCAPD3P42695 1498 aa36.11■■■■□ 3.37
KRT18P48-201ENST00000434763 CUX2O14529 1486 aa36.11■■■■□ 3.37
KRT18P48-201ENST00000434763 ERCC6Q03468 1493 aa36.02■■■■□ 3.36
KRT18P48-201ENST00000434763 ATAD2BQ9ULI0 1458 aa35.95■■■■□ 3.35
KRT18P48-201ENST00000434763 SMARCA2P51531 1590 aa35.86■■■■□ 3.33
KRT18P48-201ENST00000434763 HMGXB3Q12766 1538 aa35.84■■■■□ 3.33
KRT18P48-201ENST00000434763 SMARCA4P51532 1647 aa35.83■■■■□ 3.33
KRT18P48-201ENST00000434763 NESP48681 1621 aa35.66■■■■□ 3.3
KRT18P48-201ENST00000434763 BAZ1AQ9NRL2 1556 aaPredicted RBP35.6■■■■□ 3.29
KRT18P48-201ENST00000434763 BAZ1BQ9UIG0 1483 aaKnown RBP35.6■■■■□ 3.29
KRT18P48-201ENST00000434763 PEG3Q9GZU2 1588 aa35.5■■■■□ 3.27
KRT18P48-201ENST00000434763 THOC2Q8NI27 1593 aaKnown RBP35.42■■■■□ 3.26
KRT18P48-201ENST00000434763 LAMC3Q9Y6N6 1575 aa35.41■■■■□ 3.26
KRT18P48-201ENST00000434763 MROH2BQ7Z745 1585 aa35.28■■■■□ 3.24
KRT18P48-201ENST00000434763 KIF21AQ7Z4S6 1674 aa35.25■■■■□ 3.23
KRT18P48-201ENST00000434763 PDS5BQ9NTI5 1447 aa35.2■■■■□ 3.23
KRT18P48-201ENST00000434763 CADPSQ9ULU8 1353 aa35■■■■□ 3.19
KRT18P48-201ENST00000434763 MRC2Q9UBG0 1479 aa34.91■■■■□ 3.18
KRT18P48-201ENST00000434763 WIZO95785 1651 aa34.86■■■■□ 3.17
KRT18P48-201ENST00000434763 WDR62O43379 1518 aa34.85■■■■□ 3.17
KRT18P48-201ENST00000434763 TRIM41Q8WV44 630 aa34.74■■■■□ 3.15
KRT18P48-201ENST00000434763 CEP164Q9UPV0 1460 aa34.7■■■■□ 3.15
KRT18P48-201ENST00000434763 FANCD2Q9BXW9 1451 aa34.61■■■■□ 3.13
KRT18P48-201ENST00000434763 CFTRP13569 1480 aa34.52■■■■□ 3.12
KRT18P48-201ENST00000434763 TOP2AP11388 1531 aaKnown RBP34.4■■■■□ 3.1
KRT18P48-201ENST00000434763 RSF1Q96T23 1441 aaPredicted RBP34.38■■■■□ 3.09
KRT18P48-201ENST00000434763 OSCARQ8IYS5 282 aa34.36■■■■□ 3.09
KRT18P48-201ENST00000434763 URB2Q14146 1524 aaKnown RBP34.35■■■■□ 3.09
KRT18P48-201ENST00000434763 PRDM2Q13029 1718 aa34.21■■■■□ 3.07
KRT18P48-201ENST00000434763 IFT140Q96RY7 1462 aa34.02■■■■□ 3.04
KRT18P48-201ENST00000434763 RIMBP3CA6NJZ7 1639 aa33.99■■■■□ 3.03
KRT18P48-201ENST00000434763 RIMBP3BA6NNM3 1639 aa33.99■■■■□ 3.03
KRT18P48-201ENST00000434763 RIMBP3Q9UFD9 1639 aa33.99■■■■□ 3.03
KRT18P48-201ENST00000434763 CCDC88BA6NC98 1476 aa33.98■■■■□ 3.03
KRT18P48-201ENST00000434763 ZNF608Q9ULD9 1512 aaPredicted RBP33.98■■■■□ 3.03
KRT18P48-201ENST00000434763 TOPBP1Q92547 1522 aa33.91■■■■□ 3.02
KRT18P48-201ENST00000434763 ABCC8Q09428 1581 aa33.85■■■■□ 3.01
KRT18P48-201ENST00000434763 ARHGEF11O15085 1522 aa33.83■■■■□ 3.01
KRT18P48-201ENST00000434763 EIF4G3O43432 1585 aaKnown RBP33.81■■■■□ 3
KRT18P48-201ENST00000434763 DNMBPQ6XZF7 1577 aa33.77■■■■□ 3
KRT18P48-201ENST00000434763 CHD1O14646 1710 aa33.65■■■□□ 2.98
KRT18P48-201ENST00000434763 TARBP1Q13395 1621 aaKnown RBP33.65■■■□□ 2.98
KRT18P48-201ENST00000434763 AQRO60306 1485 aaKnown RBP eCLIP33.62■■■□□ 2.97
KRT18P48-201ENST00000434763 CYB5RLQ6IPT4 315 aa33.57■■■□□ 2.96
KRT18P48-201ENST00000434763 POLA1P09884 1462 aaPredicted RBP33.54■■■□□ 2.96
KRT18P48-201ENST00000434763 FBLN2P98095 1184 aa33.49■■■□□ 2.95
KRT18P48-201ENST00000434763 ARAP1Q96P48 1450 aa33.45■■■□□ 2.95
KRT18P48-201ENST00000434763 RAD54L2Q9Y4B4 1467 aa33.41■■■□□ 2.94
KRT18P48-201ENST00000434763 SOGA1O94964 1423 aa33.37■■■□□ 2.93
KRT18P48-201ENST00000434763 TRHP20396 242 aaPredicted RBP33.35■■■□□ 2.93
KRT18P48-201ENST00000434763 TDRD9Q8NDG6 1382 aaKnown RBP33.34■■■□□ 2.93
KRT18P48-201ENST00000434763 WDR97A6NE52 1622 aa33.32■■■□□ 2.92
KRT18P48-201ENST00000434763 SNAPC4Q5SXM2 1469 aa33.28■■■□□ 2.92
KRT18P48-201ENST00000434763 FGD5Q6ZNL6 1462 aa33.27■■■□□ 2.92
KRT18P48-201ENST00000434763 CLASP1Q7Z460 1538 aa33.23■■■□□ 2.91
KRT18P48-201ENST00000434763 SYNJ1O43426 1573 aa33.2■■■□□ 2.91
KRT18P48-201ENST00000434763 MAGI1Q96QZ7 1491 aaPredicted RBP33.19■■■□□ 2.9
KRT18P48-201ENST00000434763 CHMP7Q8WUX9 453 aaPredicted RBP33.19■■■□□ 2.9
KRT18P48-201ENST00000434763 CUX1P39880 1505 aa33.17■■■□□ 2.9
KRT18P48-201ENST00000434763 GRIN2BQ13224 1484 aa33.14■■■□□ 2.9
KRT18P48-201ENST00000434763 SYNJ2O15056 1496 aa33.08■■■□□ 2.89
KRT18P48-201ENST00000434763 PBRM1Q86U86 1689 aa33.03■■■□□ 2.88
KRT18P48-201ENST00000434763 GAPVD1Q14C86 1478 aa32.97■■■□□ 2.87
KRT18P48-201ENST00000434763 ABCA5Q8WWZ7 1642 aa32.88■■■□□ 2.85
KRT18P48-201ENST00000434763 ABCA10Q8WWZ4 1543 aa32.87■■■□□ 2.85
KRT18P48-201ENST00000434763 SUPT5HO00267 1087 aaKnown RBP32.81■■■□□ 2.84
KRT18P48-201ENST00000434763 GRIN2AQ12879 1464 aa32.72■■■□□ 2.83
KRT18P48-201ENST00000434763 AEBP2Q6ZN18 517 aaPredicted RBP32.7■■■□□ 2.83
KRT18P48-201ENST00000434763 WRNQ14191 1432 aaPredicted RBP eCLIP32.66■■■□□ 2.82
KRT18P48-201ENST00000434763 ADAMTS12P58397 1594 aa32.66■■■□□ 2.82
KRT18P48-201ENST00000434763 ERCC6L2Q5T890 1561 aa32.66■■■□□ 2.82
KRT18P48-201ENST00000434763 CEP170Q5SW79 1584 aa32.62■■■□□ 2.81
KRT18P48-201ENST00000434763 NUP160Q12769 1436 aa32.61■■■□□ 2.81
KRT18P48-201ENST00000434763 BIVM-ERCC5R4GMW8 1640 aa32.58■■■□□ 2.81
KRT18P48-201ENST00000434763 TOP2BQ02880 1626 aa32.55■■■□□ 2.8
KRT18P48-201ENST00000434763 SHROOM2Q13796 1616 aa32.55■■■□□ 2.8
KRT18P48-201ENST00000434763 FHAD1B1AJZ9 1412 aa32.54■■■□□ 2.8
KRT18P48-201ENST00000434763 ERICH3Q5RHP9 1530 aa32.47■■■□□ 2.79
KRT18P48-201ENST00000434763 KIF13AQ9H1H9 1805 aa32.35■■■□□ 2.77
KRT18P48-201ENST00000434763 PRG4Q92954 1404 aaPredicted RBP32.34■■■□□ 2.77
KRT18P48-201ENST00000434763 JPH4Q96JJ6 628 aa32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms