Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 MTCL1P1-201ENST00000446207 792 ntBASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV5A0A0B4J249 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 AL162727.3-201ENST00000635661 2787 ntBASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 PPOX-214ENST00000535223 664 ntTSL 3 BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV5A0A0B4J249 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
TRAV5A0A0B4J249 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.46□□□□□ -0.26
TRAV5A0A0B4J249 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV5A0A0B4J249 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.46□□□□□ -0.26
TRAV5A0A0B4J249 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV5A0A0B4J249 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV5A0A0B4J249 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
TRAV5A0A0B4J249 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
TRAV5A0A0B4J249 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV5A0A0B4J249 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV5A0A0B4J249 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.46□□□□□ -0.26
TRAV5A0A0B4J249 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV5A0A0B4J249 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
TRAV5A0A0B4J249 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV5A0A0B4J249 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.46□□□□□ -0.26
TRAV5A0A0B4J249 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV5A0A0B4J249 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.46□□□□□ -0.26
TRAV5A0A0B4J249 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV5A0A0B4J249 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms