Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.54■□□□□ 0.88
CTR9Q6PD62 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTR9Q6PD62 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTR9Q6PD62 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTR9Q6PD62 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTR9Q6PD62 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CTR9Q6PD62 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.54■□□□□ 0.88
CTR9Q6PD62 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.54■□□□□ 0.88
CTR9Q6PD62 AC108073.2-201ENST00000464002 357 ntBASIC20.54■□□□□ 0.88
CTR9Q6PD62 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.54■□□□□ 0.88
CTR9Q6PD62 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CTR9Q6PD62 AC027601.4-201ENST00000611259 610 ntBASIC20.54■□□□□ 0.88
CTR9Q6PD62 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTR9Q6PD62 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.54■□□□□ 0.88
CTR9Q6PD62 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTR9Q6PD62 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.54■□□□□ 0.88
CTR9Q6PD62 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTR9Q6PD62 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTR9Q6PD62 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CTR9Q6PD62 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CTR9Q6PD62 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.54■□□□□ 0.88
CTR9Q6PD62 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
CTR9Q6PD62 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CTR9Q6PD62 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTR9Q6PD62 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTR9Q6PD62 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTR9Q6PD62 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.53■□□□□ 0.88
CTR9Q6PD62 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.53■□□□□ 0.88
CTR9Q6PD62 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTR9Q6PD62 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTR9Q6PD62 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.53■□□□□ 0.88
CTR9Q6PD62 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTR9Q6PD62 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTR9Q6PD62 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTR9Q6PD62 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTR9Q6PD62 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.53■□□□□ 0.88
CTR9Q6PD62 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.53■□□□□ 0.88
CTR9Q6PD62 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.53■□□□□ 0.88
CTR9Q6PD62 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.53■□□□□ 0.88
CTR9Q6PD62 FAM197Y3-203ENST00000618346 717 ntBASIC20.53■□□□□ 0.88
CTR9Q6PD62 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.53■□□□□ 0.88
CTR9Q6PD62 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTR9Q6PD62 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTR9Q6PD62 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTR9Q6PD62 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTR9Q6PD62 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTR9Q6PD62 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTR9Q6PD62 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTR9Q6PD62 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.53■□□□□ 0.88
CTR9Q6PD62 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTR9Q6PD62 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTR9Q6PD62 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTR9Q6PD62 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
CTR9Q6PD62 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTR9Q6PD62 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.52■□□□□ 0.88
CTR9Q6PD62 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTR9Q6PD62 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTR9Q6PD62 AP002414.1-201ENST00000391405 1147 ntBASIC20.52■□□□□ 0.88
CTR9Q6PD62 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.52■□□□□ 0.88
CTR9Q6PD62 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CTR9Q6PD62 AC007967.2-201ENST00000432613 625 ntBASIC20.52■□□□□ 0.88
CTR9Q6PD62 PGAM5P1-201ENST00000518923 814 ntBASIC20.52■□□□□ 0.88
CTR9Q6PD62 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.52■□□□□ 0.88
CTR9Q6PD62 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.52■□□□□ 0.88
CTR9Q6PD62 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.52■□□□□ 0.88
CTR9Q6PD62 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.52■□□□□ 0.88
CTR9Q6PD62 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.52■□□□□ 0.88
CTR9Q6PD62 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTR9Q6PD62 AC004790.2-201ENST00000623588 572 ntBASIC20.52■□□□□ 0.88
CTR9Q6PD62 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTR9Q6PD62 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CTR9Q6PD62 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
CTR9Q6PD62 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTR9Q6PD62 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.52■□□□□ 0.88
CTR9Q6PD62 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
CTR9Q6PD62 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.52■□□□□ 0.87
CTR9Q6PD62 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CTR9Q6PD62 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CTR9Q6PD62 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CTR9Q6PD62 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.51■□□□□ 0.87
CTR9Q6PD62 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.51■□□□□ 0.87
CTR9Q6PD62 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTR9Q6PD62 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTR9Q6PD62 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTR9Q6PD62 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTR9Q6PD62 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTR9Q6PD62 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.51■□□□□ 0.87
CTR9Q6PD62 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTR9Q6PD62 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CTR9Q6PD62 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CTR9Q6PD62 MED15P5-201ENST00000423150 992 ntBASIC20.51■□□□□ 0.87
CTR9Q6PD62 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.51■□□□□ 0.87
CTR9Q6PD62 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTR9Q6PD62 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.51■□□□□ 0.87
CTR9Q6PD62 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.51■□□□□ 0.87
CTR9Q6PD62 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.51■□□□□ 0.87
CTR9Q6PD62 TERC-201ENST00000602385 541 ntBASIC20.51■□□□□ 0.87
CTR9Q6PD62 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CTR9Q6PD62 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.51■□□□□ 0.87
CTR9Q6PD62 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms