RNA–Protein interactions for RNA: ENST00000395260.3

RTKN2-203, Transcript of rhotekin 2, humanhuman

TSL 1 (best) BASIC

Gene RTKN2, Length 2,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN2-203ENST00000395260 NISCHQ9Y2I1 1504 aa38.86■■■■□ 3.81
RTKN2-203ENST00000395260 CCDC180Q9P1Z9 1646 aa33.69■■■□□ 2.98
RTKN2-203ENST00000395260 ZCCHC6Q5VYS8 1495 aaKnown RBP32.72■■■□□ 2.83
RTKN2-203ENST00000395260 DCAF8L2P0C7V8 631 aa32.12■■■□□ 2.73
RTKN2-203ENST00000395260 SHROOM4Q9ULL8 1493 aa32.09■■■□□ 2.73
RTKN2-203ENST00000395260 DCAF1Q9Y4B6 1507 aa32.08■■■□□ 2.73
RTKN2-203ENST00000395260 ABCC9O60706 1549 aa31.64■■■□□ 2.65
RTKN2-203ENST00000395260 MYO15BQ96JP2 1530 aa31.55■■■□□ 2.64
RTKN2-203ENST00000395260 NACADO15069 1562 aa31.3■■■□□ 2.6
RTKN2-203ENST00000395260 SCRIBQ14160 1630 aa31.12■■■□□ 2.57
RTKN2-203ENST00000395260 SUPT5HO00267 1087 aaKnown RBP31.05■■■□□ 2.56
RTKN2-203ENST00000395260 RB1CC1Q8TDY2 1594 aa30.97■■■□□ 2.55
RTKN2-203ENST00000395260 UNC13AQ9UPW8 1703 aa30.38■■■□□ 2.45
RTKN2-203ENST00000395260 RSF1Q96T23 1441 aaPredicted RBP30.3■■■□□ 2.44
RTKN2-203ENST00000395260 CECR2Q9BXF3 1484 aa30.21■■■□□ 2.43
RTKN2-203ENST00000395260 MROH2BQ7Z745 1585 aa30.07■■■□□ 2.4
RTKN2-203ENST00000395260 BICRAQ9NZM4 1560 aa30.03■■■□□ 2.4
RTKN2-203ENST00000395260 BAZ1AQ9NRL2 1556 aaPredicted RBP29.98■■■□□ 2.39
RTKN2-203ENST00000395260 PABPN1Q86U42 306 aaKnown RBP eCLIP29.93■■■□□ 2.38
RTKN2-203ENST00000395260 WIZO95785 1651 aa29.86■■■□□ 2.37
RTKN2-203ENST00000395260 CHIC1Q5VXU3 224 aa29.85■■■□□ 2.37
RTKN2-203ENST00000395260 SMARCA4P51532 1647 aa29.81■■■□□ 2.36
RTKN2-203ENST00000395260 TOP2AP11388 1531 aaKnown RBP29.52■■■□□ 2.32
RTKN2-203ENST00000395260 PEG3Q9GZU2 1588 aa29.38■■■□□ 2.29
RTKN2-203ENST00000395260 SMARCA2P51531 1590 aa29.27■■■□□ 2.28
RTKN2-203ENST00000395260 CCDC88BA6NC98 1476 aa29.25■■■□□ 2.27
RTKN2-203ENST00000395260 ATAD2BQ9ULI0 1458 aa29.23■■■□□ 2.27
RTKN2-203ENST00000395260 EIF4G1Q04637 1599 aaKnown RBP29.15■■■□□ 2.26
RTKN2-203ENST00000395260 TRIM41Q8WV44 630 aa29.13■■■□□ 2.25
RTKN2-203ENST00000395260 BAZ1BQ9UIG0 1483 aaKnown RBP29.11■■■□□ 2.25
RTKN2-203ENST00000395260 NCAPD3P42695 1498 aa28.89■■■□□ 2.22
RTKN2-203ENST00000395260 HMGXB3Q12766 1538 aa28.88■■■□□ 2.21
RTKN2-203ENST00000395260 ABCC8Q09428 1581 aa28.79■■■□□ 2.2
RTKN2-203ENST00000395260 LOC105371045A0A1W2PR82 267 aa28.77■■■□□ 2.2
RTKN2-203ENST00000395260 FAM9AQ8IZU1 332 aaPredicted RBP28.66■■■□□ 2.18
RTKN2-203ENST00000395260 CC2D2AQ9P2K1 1620 aa28.6■■■□□ 2.17
RTKN2-203ENST00000395260 WRNQ14191 1432 aaPredicted RBP eCLIP28.53■■■□□ 2.16
RTKN2-203ENST00000395260 SYNJ1O43426 1573 aa28.4■■■□□ 2.14
RTKN2-203ENST00000395260 CFTRP13569 1480 aa28.37■■■□□ 2.13
RTKN2-203ENST00000395260 SOGA1O94964 1423 aa28.31■■■□□ 2.12
RTKN2-203ENST00000395260 EHMT2Q96KQ7 1210 aa28.3■■■□□ 2.12
RTKN2-203ENST00000395260 EEA1Q15075 1411 aa28.28■■■□□ 2.12
RTKN2-203ENST00000395260 TOP2BQ02880 1626 aa28.23■■■□□ 2.11
RTKN2-203ENST00000395260 PRDM2Q13029 1718 aa28.23■■■□□ 2.11
RTKN2-203ENST00000395260 CADPSQ9ULU8 1353 aa28.2■■■□□ 2.11
RTKN2-203ENST00000395260 BIVM-ERCC5R4GMW8 1640 aa28.19■■■□□ 2.1
RTKN2-203ENST00000395260 RUSC2Q8N2Y8 1516 aa28.19■■■□□ 2.1
RTKN2-203ENST00000395260 CSRNP3Q8WYN3 585 aa28.13■■■□□ 2.09
RTKN2-203ENST00000395260 CUX1P39880 1505 aa28.09■■■□□ 2.09
RTKN2-203ENST00000395260 GOLGA3Q08378 1498 aa27.94■■■□□ 2.06
RTKN2-203ENST00000395260 FANCD2Q9BXW9 1451 aa27.91■■■□□ 2.06
RTKN2-203ENST00000395260 TNIKQ9UKE5 1360 aa27.91■■■□□ 2.06
RTKN2-203ENST00000395260 CEP164Q9UPV0 1460 aa27.9■■■□□ 2.06
RTKN2-203ENST00000395260 KIF21BO75037 1637 aa27.9■■■□□ 2.06
RTKN2-203ENST00000395260 NESP48681 1621 aa27.88■■■□□ 2.05
RTKN2-203ENST00000395260 LAMC3Q9Y6N6 1575 aa27.86■■■□□ 2.05
RTKN2-203ENST00000395260 UBTFP17480 764 aaKnown RBP27.85■■■□□ 2.05
RTKN2-203ENST00000395260 PCGF6Q9BYE7 350 aa27.85■■■□□ 2.05
RTKN2-203ENST00000395260 CEP162Q5TB80 1403 aa27.82■■■□□ 2.04
RTKN2-203ENST00000395260 DNAJC5BQ9UF47 199 aa27.8■■■□□ 2.04
RTKN2-203ENST00000395260 KIF27Q86VH2 1401 aa27.77■■■□□ 2.04
RTKN2-203ENST00000395260 FGD5Q6ZNL6 1462 aa27.73■■■□□ 2.03
RTKN2-203ENST00000395260 RAPGEF2Q9Y4G8 1499 aa27.72■■■□□ 2.03
RTKN2-203ENST00000395260 TRIM26Q12899 539 aaPredicted RBP27.71■■■□□ 2.03
RTKN2-203ENST00000395260 DNMBPQ6XZF7 1577 aa27.71■■■□□ 2.03
RTKN2-203ENST00000395260 PRXQ9BXM0 1461 aa27.65■■■□□ 2.02
RTKN2-203ENST00000395260 PDS5BQ9NTI5 1447 aa27.65■■■□□ 2.02
RTKN2-203ENST00000395260 ERICH3Q5RHP9 1530 aa27.64■■■□□ 2.02
RTKN2-203ENST00000395260 TOPBP1Q92547 1522 aa27.64■■■□□ 2.02
RTKN2-203ENST00000395260 CUX2O14529 1486 aa27.64■■■□□ 2.01
RTKN2-203ENST00000395260 POLA1P09884 1462 aaPredicted RBP27.55■■■□□ 2
RTKN2-203ENST00000395260 URB2Q14146 1524 aaKnown RBP27.54■■■□□ 2
RTKN2-203ENST00000395260 KIF21AQ7Z4S6 1674 aa27.53■■■□□ 2
RTKN2-203ENST00000395260 CLIP1P30622 1438 aa27.52■■■□□ 2
RTKN2-203ENST00000395260 RAD54L2Q9Y4B4 1467 aa27.48■■□□□ 1.99
RTKN2-203ENST00000395260 IGF1RP08069 1367 aa27.48■■□□□ 1.99
RTKN2-203ENST00000395260 ABCA10Q8WWZ4 1543 aa27.47■■□□□ 1.99
RTKN2-203ENST00000395260 PPARGC1BQ86YN6 1023 aaKnown RBP27.44■■□□□ 1.98
RTKN2-203ENST00000395260 CARMIL1Q5VZK9 1371 aa27.37■■□□□ 1.97
RTKN2-203ENST00000395260 RANGAP1P46060 587 aaPredicted RBP27.36■■□□□ 1.97
RTKN2-203ENST00000395260 WDR97A6NE52 1622 aa27.35■■□□□ 1.97
RTKN2-203ENST00000395260 VPS8Q8N3P4 1428 aa27.31■■□□□ 1.96
RTKN2-203ENST00000395260 HRCP23327 699 aa27.3■■□□□ 1.96
RTKN2-203ENST00000395260 MRC2Q9UBG0 1479 aa27.27■■□□□ 1.96
RTKN2-203ENST00000395260 CUL7Q14999 1698 aa27.23■■□□□ 1.95
RTKN2-203ENST00000395260 ABCA5Q8WWZ7 1642 aa27.22■■□□□ 1.95
RTKN2-203ENST00000395260 TDRD9Q8NDG6 1382 aaKnown RBP27.19■■□□□ 1.94
RTKN2-203ENST00000395260 TARBP1Q13395 1621 aaKnown RBP27.19■■□□□ 1.94
RTKN2-203ENST00000395260 ARAP1Q96P48 1450 aa27.18■■□□□ 1.94
RTKN2-203ENST00000395260 TTBK1Q5TCY1 1321 aaPredicted RBP27.17■■□□□ 1.94
RTKN2-203ENST00000395260 GAPVD1Q14C86 1478 aa27.16■■□□□ 1.94
RTKN2-203ENST00000395260 ARHGAP35Q9NRY4 1499 aa27.11■■□□□ 1.93
RTKN2-203ENST00000395260 WDR62O43379 1518 aa27.1■■□□□ 1.93
RTKN2-203ENST00000395260 APLP2Q06481 763 aa27.1■■□□□ 1.93
RTKN2-203ENST00000395260 ERCC6Q03468 1493 aa27.09■■□□□ 1.93
RTKN2-203ENST00000395260 IFT140Q96RY7 1462 aa26.99■■□□□ 1.91
RTKN2-203ENST00000395260 CTTNBP2Q8WZ74 1663 aa26.99■■□□□ 1.91
RTKN2-203ENST00000395260 PBRM1Q86U86 1689 aa26.98■■□□□ 1.91
RTKN2-203ENST00000395260 AQRO60306 1485 aaKnown RBP eCLIP26.95■■□□□ 1.9
RTKN2-203ENST00000395260 THOC2Q8NI27 1593 aaKnown RBP26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms