RNA–Protein interactions for RNA: ENST00000563180.1

IRF8-203, Transcript of interferon regulatory factor 8, humanhuman

TSL 1 (best) BASIC

Gene IRF8, Length 1,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-203ENST00000563180 NISCHQ9Y2I1 1504 aa41.29■■■■■ 4.2
IRF8-203ENST00000563180 CCDC180Q9P1Z9 1646 aa36.62■■■■□ 3.45
IRF8-203ENST00000563180 ABCC9O60706 1549 aa35.71■■■■□ 3.31
IRF8-203ENST00000563180 DCAF8L2P0C7V8 631 aa34.51■■■■□ 3.12
IRF8-203ENST00000563180 ZCCHC6Q5VYS8 1495 aaKnown RBP34.41■■■■□ 3.1
IRF8-203ENST00000563180 RB1CC1Q8TDY2 1594 aa34.39■■■■□ 3.1
IRF8-203ENST00000563180 NACADO15069 1562 aa34.38■■■■□ 3.09
IRF8-203ENST00000563180 MYO15BQ96JP2 1530 aa34.2■■■■□ 3.06
IRF8-203ENST00000563180 DCAF1Q9Y4B6 1507 aa34.13■■■■□ 3.05
IRF8-203ENST00000563180 UNC13AQ9UPW8 1703 aa33.66■■■□□ 2.98
IRF8-203ENST00000563180 SCRIBQ14160 1630 aa33.47■■■□□ 2.95
IRF8-203ENST00000563180 PABPN1Q86U42 306 aaKnown RBP eCLIP33.42■■■□□ 2.94
IRF8-203ENST00000563180 BICRAQ9NZM4 1560 aa33.35■■■□□ 2.93
IRF8-203ENST00000563180 SHROOM4Q9ULL8 1493 aa32.94■■■□□ 2.86
IRF8-203ENST00000563180 DNAJC5BQ9UF47 199 aa32.62■■■□□ 2.81
IRF8-203ENST00000563180 EIF4G1Q04637 1599 aaKnown RBP32.44■■■□□ 2.78
IRF8-203ENST00000563180 CC2D2AQ9P2K1 1620 aa32.29■■■□□ 2.76
IRF8-203ENST00000563180 CECR2Q9BXF3 1484 aa32.17■■■□□ 2.74
IRF8-203ENST00000563180 SMARCA4P51532 1647 aa32.01■■■□□ 2.71
IRF8-203ENST00000563180 BAZ1AQ9NRL2 1556 aaPredicted RBP31.98■■■□□ 2.71
IRF8-203ENST00000563180 MROH2BQ7Z745 1585 aa31.84■■■□□ 2.69
IRF8-203ENST00000563180 ATAD2BQ9ULI0 1458 aa31.78■■■□□ 2.68
IRF8-203ENST00000563180 SMARCA2P51531 1590 aa31.75■■■□□ 2.67
IRF8-203ENST00000563180 NCAPD3P42695 1498 aa31.72■■■□□ 2.67
IRF8-203ENST00000563180 PEG3Q9GZU2 1588 aa31.65■■■□□ 2.66
IRF8-203ENST00000563180 HMGXB3Q12766 1538 aa31.57■■■□□ 2.64
IRF8-203ENST00000563180 BAZ1BQ9UIG0 1483 aaKnown RBP31.53■■■□□ 2.64
IRF8-203ENST00000563180 WIZO95785 1651 aa31.53■■■□□ 2.64
IRF8-203ENST00000563180 RSF1Q96T23 1441 aaPredicted RBP31.53■■■□□ 2.64
IRF8-203ENST00000563180 TOP2AP11388 1531 aaKnown RBP31.17■■■□□ 2.58
IRF8-203ENST00000563180 NESP48681 1621 aa30.95■■■□□ 2.55
IRF8-203ENST00000563180 SUPT5HO00267 1087 aaKnown RBP30.94■■■□□ 2.54
IRF8-203ENST00000563180 LAMC3Q9Y6N6 1575 aa30.86■■■□□ 2.53
IRF8-203ENST00000563180 CCDC88BA6NC98 1476 aa30.83■■■□□ 2.53
IRF8-203ENST00000563180 CADPSQ9ULU8 1353 aa30.82■■■□□ 2.52
IRF8-203ENST00000563180 ERCC6Q03468 1493 aa30.75■■■□□ 2.51
IRF8-203ENST00000563180 CFTRP13569 1480 aa30.66■■■□□ 2.5
IRF8-203ENST00000563180 PDS5BQ9NTI5 1447 aa30.66■■■□□ 2.5
IRF8-203ENST00000563180 KIF21AQ7Z4S6 1674 aa30.6■■■□□ 2.49
IRF8-203ENST00000563180 PRDM2Q13029 1718 aa30.49■■■□□ 2.47
IRF8-203ENST00000563180 FANCD2Q9BXW9 1451 aa30.47■■■□□ 2.47
IRF8-203ENST00000563180 CEP164Q9UPV0 1460 aa30.42■■■□□ 2.46
IRF8-203ENST00000563180 THOC2Q8NI27 1593 aaKnown RBP30.41■■■□□ 2.46
IRF8-203ENST00000563180 MRC2Q9UBG0 1479 aa30.33■■■□□ 2.45
IRF8-203ENST00000563180 CUX2O14529 1486 aa30.32■■■□□ 2.44
IRF8-203ENST00000563180 WDR62O43379 1518 aa30.21■■■□□ 2.43
IRF8-203ENST00000563180 URB2Q14146 1524 aaKnown RBP30.17■■■□□ 2.42
IRF8-203ENST00000563180 TOPBP1Q92547 1522 aa30.01■■■□□ 2.39
IRF8-203ENST00000563180 ABCC8Q09428 1581 aa30■■■□□ 2.39
IRF8-203ENST00000563180 DNMBPQ6XZF7 1577 aa29.99■■■□□ 2.39
IRF8-203ENST00000563180 CUX1P39880 1505 aa29.86■■■□□ 2.37
IRF8-203ENST00000563180 IFT140Q96RY7 1462 aa29.76■■■□□ 2.35
IRF8-203ENST00000563180 POLA1P09884 1462 aaPredicted RBP29.75■■■□□ 2.35
IRF8-203ENST00000563180 FGD5Q6ZNL6 1462 aa29.73■■■□□ 2.35
IRF8-203ENST00000563180 WRNQ14191 1432 aaPredicted RBP eCLIP29.73■■■□□ 2.35
IRF8-203ENST00000563180 TARBP1Q13395 1621 aaKnown RBP29.67■■■□□ 2.34
IRF8-203ENST00000563180 SOGA1O94964 1423 aa29.67■■■□□ 2.34
IRF8-203ENST00000563180 SYNJ1O43426 1573 aa29.66■■■□□ 2.34
IRF8-203ENST00000563180 RAD54L2Q9Y4B4 1467 aa29.66■■■□□ 2.34
IRF8-203ENST00000563180 TOP2BQ02880 1626 aa29.64■■■□□ 2.34
IRF8-203ENST00000563180 BIVM-ERCC5R4GMW8 1640 aa29.64■■■□□ 2.34
IRF8-203ENST00000563180 ZNF608Q9ULD9 1512 aaPredicted RBP29.64■■■□□ 2.34
IRF8-203ENST00000563180 EIF4G3O43432 1585 aaKnown RBP29.52■■■□□ 2.32
IRF8-203ENST00000563180 DNAJC5Q9H3Z4 198 aa29.51■■■□□ 2.31
IRF8-203ENST00000563180 AQRO60306 1485 aaKnown RBP eCLIP29.5■■■□□ 2.31
IRF8-203ENST00000563180 TDRD9Q8NDG6 1382 aaKnown RBP29.48■■■□□ 2.31
IRF8-203ENST00000563180 WDR97A6NE52 1622 aa29.47■■■□□ 2.31
IRF8-203ENST00000563180 ABCA10Q8WWZ4 1543 aa29.43■■■□□ 2.3
IRF8-203ENST00000563180 GAPVD1Q14C86 1478 aa29.31■■■□□ 2.28
IRF8-203ENST00000563180 ABCA5Q8WWZ7 1642 aa29.31■■■□□ 2.28
IRF8-203ENST00000563180 GRIN2BQ13224 1484 aa29.27■■■□□ 2.28
IRF8-203ENST00000563180 PBRM1Q86U86 1689 aa29.26■■■□□ 2.28
IRF8-203ENST00000563180 SNAPC4Q5SXM2 1469 aa29.22■■■□□ 2.27
IRF8-203ENST00000563180 TRIM41Q8WV44 630 aa29.19■■■□□ 2.26
IRF8-203ENST00000563180 MAGI1Q96QZ7 1491 aaPredicted RBP29.17■■■□□ 2.26
IRF8-203ENST00000563180 FBLN2P98095 1184 aa29.15■■■□□ 2.26
IRF8-203ENST00000563180 CHD1O14646 1710 aa29.15■■■□□ 2.26
IRF8-203ENST00000563180 OSCARQ8IYS5 282 aa29.14■■■□□ 2.26
IRF8-203ENST00000563180 KIF27Q86VH2 1401 aa29.09■■■□□ 2.25
IRF8-203ENST00000563180 ERICH3Q5RHP9 1530 aa29.08■■■□□ 2.25
IRF8-203ENST00000563180 CHMP7Q8WUX9 453 aaPredicted RBP29.07■■■□□ 2.24
IRF8-203ENST00000563180 SYNJ2O15056 1496 aa29.06■■■□□ 2.24
IRF8-203ENST00000563180 ADAMTS12P58397 1594 aa29.01■■■□□ 2.23
IRF8-203ENST00000563180 FHAD1B1AJZ9 1412 aa28.97■■■□□ 2.23
IRF8-203ENST00000563180 IGF1RP08069 1367 aa28.96■■■□□ 2.23
IRF8-203ENST00000563180 CHIC1Q5VXU3 224 aa28.96■■■□□ 2.23
IRF8-203ENST00000563180 RUSC2Q8N2Y8 1516 aa28.93■■■□□ 2.22
IRF8-203ENST00000563180 GRIN2AQ12879 1464 aa28.9■■■□□ 2.22
IRF8-203ENST00000563180 CUL7Q14999 1698 aa28.86■■■□□ 2.21
IRF8-203ENST00000563180 CARMIL1Q5VZK9 1371 aa28.8■■■□□ 2.2
IRF8-203ENST00000563180 CLASP1Q7Z460 1538 aa28.79■■■□□ 2.2
IRF8-203ENST00000563180 CEP170Q5SW79 1584 aa28.76■■■□□ 2.19
IRF8-203ENST00000563180 NUP160Q12769 1436 aa28.75■■■□□ 2.19
IRF8-203ENST00000563180 RIMBP3CA6NJZ7 1639 aa28.66■■■□□ 2.18
IRF8-203ENST00000563180 RIMBP3BA6NNM3 1639 aa28.66■■■□□ 2.18
IRF8-203ENST00000563180 RIMBP3Q9UFD9 1639 aa28.66■■■□□ 2.18
IRF8-203ENST00000563180 ARHGEF11O15085 1522 aa28.65■■■□□ 2.18
IRF8-203ENST00000563180 RAPGEF2Q9Y4G8 1499 aa28.64■■■□□ 2.18
IRF8-203ENST00000563180 EEA1Q15075 1411 aa28.63■■■□□ 2.17
IRF8-203ENST00000563180 FAM9AQ8IZU1 332 aaPredicted RBP28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms