Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.54■□□□□ 0.88
TNNI2P48788 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.54■□□□□ 0.88
TNNI2P48788 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNNI2P48788 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNNI2P48788 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TNNI2P48788 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNNI2P48788 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TNNI2P48788 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.54■□□□□ 0.88
TNNI2P48788 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.54■□□□□ 0.88
TNNI2P48788 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNNI2P48788 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNNI2P48788 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.54■□□□□ 0.88
TNNI2P48788 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.54■□□□□ 0.88
TNNI2P48788 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNNI2P48788 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
TNNI2P48788 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.54■□□□□ 0.88
TNNI2P48788 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNNI2P48788 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.54■□□□□ 0.88
TNNI2P48788 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.54■□□□□ 0.88
TNNI2P48788 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.54■□□□□ 0.88
TNNI2P48788 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.54■□□□□ 0.88
TNNI2P48788 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
TNNI2P48788 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.54■□□□□ 0.88
TNNI2P48788 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.54■□□□□ 0.88
TNNI2P48788 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNNI2P48788 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNNI2P48788 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.54■□□□□ 0.88
TNNI2P48788 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNNI2P48788 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNNI2P48788 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.54■□□□□ 0.88
TNNI2P48788 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TNNI2P48788 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.53■□□□□ 0.88
TNNI2P48788 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TNNI2P48788 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.53■□□□□ 0.88
TNNI2P48788 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI2P48788 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI2P48788 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI2P48788 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI2P48788 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
TNNI2P48788 AC046185.3-201ENST00000623228 1824 ntBASIC20.53■□□□□ 0.88
TNNI2P48788 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.53■□□□□ 0.88
TNNI2P48788 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI2P48788 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI2P48788 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI2P48788 AL139400.1-201ENST00000366220 510 ntBASIC20.53■□□□□ 0.88
TNNI2P48788 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.53■□□□□ 0.88
TNNI2P48788 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TNNI2P48788 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.53■□□□□ 0.88
TNNI2P48788 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TNNI2P48788 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.53■□□□□ 0.88
TNNI2P48788 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.53■□□□□ 0.88
TNNI2P48788 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.53■□□□□ 0.88
TNNI2P48788 AL354751.1-201ENST00000412768 1863 ntBASIC20.53■□□□□ 0.88
TNNI2P48788 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI2P48788 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.53■□□□□ 0.88
TNNI2P48788 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI2P48788 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI2P48788 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.53■□□□□ 0.88
TNNI2P48788 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TNNI2P48788 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.53■□□□□ 0.88
TNNI2P48788 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI2P48788 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI2P48788 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI2P48788 AL121761.2-201ENST00000598007 1648 ntBASIC20.53■□□□□ 0.88
TNNI2P48788 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.53■□□□□ 0.88
TNNI2P48788 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI2P48788 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
TNNI2P48788 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI2P48788 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TNNI2P48788 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI2P48788 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI2P48788 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.52■□□□□ 0.88
TNNI2P48788 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TNNI2P48788 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI2P48788 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.52■□□□□ 0.88
TNNI2P48788 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TNNI2P48788 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.52■□□□□ 0.88
TNNI2P48788 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI2P48788 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI2P48788 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI2P48788 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI2P48788 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI2P48788 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TNNI2P48788 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI2P48788 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TNNI2P48788 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.52■□□□□ 0.88
TNNI2P48788 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.52■□□□□ 0.88
TNNI2P48788 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.52■□□□□ 0.88
TNNI2P48788 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TNNI2P48788 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.52■□□□□ 0.88
TNNI2P48788 AC025678.2-201ENST00000562061 970 ntBASIC20.52■□□□□ 0.88
TNNI2P48788 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI2P48788 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.52■□□□□ 0.88
TNNI2P48788 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI2P48788 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.52■□□□□ 0.88
TNNI2P48788 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI2P48788 FLJ13224-201ENST00000313737 1514 ntBASIC20.52■□□□□ 0.87
TNNI2P48788 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TNNI2P48788 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TNNI2P48788 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms