RNA–Protein interactions for RNA: ENST00000295454.7

GABRB1-201, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB1, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-201ENST00000295454 NISCHQ9Y2I1 1504 aa40.16■■■■■ 4.02
GABRB1-201ENST00000295454 CCDC180Q9P1Z9 1646 aa34.75■■■■□ 3.15
GABRB1-201ENST00000295454 ZCCHC6Q5VYS8 1495 aaKnown RBP33.84■■■■□ 3.01
GABRB1-201ENST00000295454 SHROOM4Q9ULL8 1493 aa33.34■■■□□ 2.93
GABRB1-201ENST00000295454 DCAF8L2P0C7V8 631 aa33.17■■■□□ 2.9
GABRB1-201ENST00000295454 DCAF1Q9Y4B6 1507 aa33.05■■■□□ 2.88
GABRB1-201ENST00000295454 ABCC9O60706 1549 aa32.67■■■□□ 2.82
GABRB1-201ENST00000295454 MYO15BQ96JP2 1530 aa32.44■■■□□ 2.78
GABRB1-201ENST00000295454 SCRIBQ14160 1630 aa32.25■■■□□ 2.75
GABRB1-201ENST00000295454 NACADO15069 1562 aa32.22■■■□□ 2.75
GABRB1-201ENST00000295454 SUPT5HO00267 1087 aaKnown RBP32.21■■■□□ 2.75
GABRB1-201ENST00000295454 RB1CC1Q8TDY2 1594 aa31.88■■■□□ 2.69
GABRB1-201ENST00000295454 UNC13AQ9UPW8 1703 aa31.51■■■□□ 2.64
GABRB1-201ENST00000295454 RSF1Q96T23 1441 aaPredicted RBP31.37■■■□□ 2.61
GABRB1-201ENST00000295454 CECR2Q9BXF3 1484 aa31.32■■■□□ 2.6
GABRB1-201ENST00000295454 MROH2BQ7Z745 1585 aa31.16■■■□□ 2.58
GABRB1-201ENST00000295454 BICRAQ9NZM4 1560 aa31.07■■■□□ 2.56
GABRB1-201ENST00000295454 CHIC1Q5VXU3 224 aa30.99■■■□□ 2.55
GABRB1-201ENST00000295454 WIZO95785 1651 aa30.99■■■□□ 2.55
GABRB1-201ENST00000295454 PABPN1Q86U42 306 aaKnown RBP eCLIP30.94■■■□□ 2.54
GABRB1-201ENST00000295454 BAZ1AQ9NRL2 1556 aaPredicted RBP30.93■■■□□ 2.54
GABRB1-201ENST00000295454 SMARCA4P51532 1647 aa30.83■■■□□ 2.53
GABRB1-201ENST00000295454 TOP2AP11388 1531 aaKnown RBP30.51■■■□□ 2.48
GABRB1-201ENST00000295454 PEG3Q9GZU2 1588 aa30.32■■■□□ 2.44
GABRB1-201ENST00000295454 SMARCA2P51531 1590 aa30.32■■■□□ 2.44
GABRB1-201ENST00000295454 EIF4G1Q04637 1599 aaKnown RBP30.29■■■□□ 2.44
GABRB1-201ENST00000295454 CCDC88BA6NC98 1476 aa30.26■■■□□ 2.44
GABRB1-201ENST00000295454 ATAD2BQ9ULI0 1458 aa30.17■■■□□ 2.42
GABRB1-201ENST00000295454 TRIM41Q8WV44 630 aa30.1■■■□□ 2.41
GABRB1-201ENST00000295454 BAZ1BQ9UIG0 1483 aaKnown RBP30.02■■■□□ 2.4
GABRB1-201ENST00000295454 LOC105371045A0A1W2PR82 267 aa29.95■■■□□ 2.39
GABRB1-201ENST00000295454 ABCC8Q09428 1581 aa29.91■■■□□ 2.38
GABRB1-201ENST00000295454 FAM9AQ8IZU1 332 aaPredicted RBP29.78■■■□□ 2.36
GABRB1-201ENST00000295454 HMGXB3Q12766 1538 aa29.76■■■□□ 2.35
GABRB1-201ENST00000295454 NCAPD3P42695 1498 aa29.75■■■□□ 2.35
GABRB1-201ENST00000295454 CC2D2AQ9P2K1 1620 aa29.53■■■□□ 2.32
GABRB1-201ENST00000295454 EHMT2Q96KQ7 1210 aa29.48■■■□□ 2.31
GABRB1-201ENST00000295454 WRNQ14191 1432 aaPredicted RBP eCLIP29.48■■■□□ 2.31
GABRB1-201ENST00000295454 SYNJ1O43426 1573 aa29.47■■■□□ 2.31
GABRB1-201ENST00000295454 SOGA1O94964 1423 aa29.38■■■□□ 2.29
GABRB1-201ENST00000295454 RUSC2Q8N2Y8 1516 aa29.32■■■□□ 2.28
GABRB1-201ENST00000295454 CFTRP13569 1480 aa29.26■■■□□ 2.27
GABRB1-201ENST00000295454 PRDM2Q13029 1718 aa29.21■■■□□ 2.27
GABRB1-201ENST00000295454 TOP2BQ02880 1626 aa29.2■■■□□ 2.27
GABRB1-201ENST00000295454 BIVM-ERCC5R4GMW8 1640 aa29.18■■■□□ 2.26
GABRB1-201ENST00000295454 EEA1Q15075 1411 aa29.13■■■□□ 2.25
GABRB1-201ENST00000295454 CUX1P39880 1505 aa29.09■■■□□ 2.25
GABRB1-201ENST00000295454 CSRNP3Q8WYN3 585 aa29.06■■■□□ 2.24
GABRB1-201ENST00000295454 CADPSQ9ULU8 1353 aa29.05■■■□□ 2.24
GABRB1-201ENST00000295454 PCGF6Q9BYE7 350 aa28.99■■■□□ 2.23
GABRB1-201ENST00000295454 GOLGA3Q08378 1498 aa28.89■■■□□ 2.22
GABRB1-201ENST00000295454 KIF21BO75037 1637 aa28.88■■■□□ 2.21
GABRB1-201ENST00000295454 NESP48681 1621 aa28.88■■■□□ 2.21
GABRB1-201ENST00000295454 DNAJC5BQ9UF47 199 aa28.86■■■□□ 2.21
GABRB1-201ENST00000295454 TNIKQ9UKE5 1360 aa28.85■■■□□ 2.21
GABRB1-201ENST00000295454 CEP162Q5TB80 1403 aa28.83■■■□□ 2.21
GABRB1-201ENST00000295454 CEP164Q9UPV0 1460 aa28.82■■■□□ 2.2
GABRB1-201ENST00000295454 FANCD2Q9BXW9 1451 aa28.8■■■□□ 2.2
GABRB1-201ENST00000295454 UBTFP17480 764 aaKnown RBP28.78■■■□□ 2.2
GABRB1-201ENST00000295454 RAPGEF2Q9Y4G8 1499 aa28.74■■■□□ 2.19
GABRB1-201ENST00000295454 TRIM26Q12899 539 aaPredicted RBP28.71■■■□□ 2.19
GABRB1-201ENST00000295454 LAMC3Q9Y6N6 1575 aa28.68■■■□□ 2.18
GABRB1-201ENST00000295454 FGD5Q6ZNL6 1462 aa28.68■■■□□ 2.18
GABRB1-201ENST00000295454 KIF27Q86VH2 1401 aa28.64■■■□□ 2.17
GABRB1-201ENST00000295454 PPARGC1BQ86YN6 1023 aaKnown RBP28.61■■■□□ 2.17
GABRB1-201ENST00000295454 DNMBPQ6XZF7 1577 aa28.6■■■□□ 2.17
GABRB1-201ENST00000295454 PRXQ9BXM0 1461 aa28.6■■■□□ 2.17
GABRB1-201ENST00000295454 CUX2O14529 1486 aa28.56■■■□□ 2.16
GABRB1-201ENST00000295454 ERICH3Q5RHP9 1530 aa28.55■■■□□ 2.16
GABRB1-201ENST00000295454 TOPBP1Q92547 1522 aa28.55■■■□□ 2.16
GABRB1-201ENST00000295454 KIF21AQ7Z4S6 1674 aa28.52■■■□□ 2.16
GABRB1-201ENST00000295454 URB2Q14146 1524 aaKnown RBP28.48■■■□□ 2.15
GABRB1-201ENST00000295454 CLIP1P30622 1438 aa28.47■■■□□ 2.15
GABRB1-201ENST00000295454 POLA1P09884 1462 aaPredicted RBP28.46■■■□□ 2.15
GABRB1-201ENST00000295454 RAD54L2Q9Y4B4 1467 aa28.46■■■□□ 2.15
GABRB1-201ENST00000295454 HRCP23327 699 aa28.44■■■□□ 2.14
GABRB1-201ENST00000295454 PDS5BQ9NTI5 1447 aa28.4■■■□□ 2.14
GABRB1-201ENST00000295454 RANGAP1P46060 587 aaPredicted RBP28.39■■■□□ 2.14
GABRB1-201ENST00000295454 IGF1RP08069 1367 aa28.39■■■□□ 2.13
GABRB1-201ENST00000295454 ABCA10Q8WWZ4 1543 aa28.35■■■□□ 2.13
GABRB1-201ENST00000295454 WDR97A6NE52 1622 aa28.33■■■□□ 2.13
GABRB1-201ENST00000295454 TTBK1Q5TCY1 1321 aaPredicted RBP28.31■■■□□ 2.12
GABRB1-201ENST00000295454 VPS8Q8N3P4 1428 aa28.26■■■□□ 2.12
GABRB1-201ENST00000295454 CARMIL1Q5VZK9 1371 aa28.24■■■□□ 2.11
GABRB1-201ENST00000295454 ARAP1Q96P48 1450 aa28.22■■■□□ 2.11
GABRB1-201ENST00000295454 ABCA5Q8WWZ7 1642 aa28.16■■■□□ 2.1
GABRB1-201ENST00000295454 TARBP1Q13395 1621 aaKnown RBP28.11■■■□□ 2.09
GABRB1-201ENST00000295454 TDRD9Q8NDG6 1382 aaKnown RBP28.1■■■□□ 2.09
GABRB1-201ENST00000295454 CUL7Q14999 1698 aa28.1■■■□□ 2.09
GABRB1-201ENST00000295454 ARHGAP35Q9NRY4 1499 aa28.1■■■□□ 2.09
GABRB1-201ENST00000295454 MRC2Q9UBG0 1479 aa28.09■■■□□ 2.09
GABRB1-201ENST00000295454 GAPVD1Q14C86 1478 aa28.02■■■□□ 2.08
GABRB1-201ENST00000295454 CTTNBP2Q8WZ74 1663 aa27.96■■■□□ 2.07
GABRB1-201ENST00000295454 WDR62O43379 1518 aa27.95■■■□□ 2.07
GABRB1-201ENST00000295454 PBRM1Q86U86 1689 aa27.94■■■□□ 2.06
GABRB1-201ENST00000295454 APLP2Q06481 763 aa27.9■■■□□ 2.06
GABRB1-201ENST00000295454 ERCC6Q03468 1493 aa27.86■■■□□ 2.05
GABRB1-201ENST00000295454 AQRO60306 1485 aaKnown RBP eCLIP27.86■■■□□ 2.05
GABRB1-201ENST00000295454 THOC2Q8NI27 1593 aaKnown RBP27.85■■■□□ 2.05
GABRB1-201ENST00000295454 ZNF608Q9ULD9 1512 aaPredicted RBP27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms