RNA–Protein interactions for RNA: ENST00000578803.1

LINC00683-201, long intergenic non-protein coding RNA 683, humanhuman

TSL 2 BASIC

Gene LINC00683, Length 2,221 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00683-201ENST00000578803 NISCHQ9Y2I1 1504 aa40.44■■■■■ 4.06
LINC00683-201ENST00000578803 CCDC180Q9P1Z9 1646 aa35.17■■■■□ 3.22
LINC00683-201ENST00000578803 ZCCHC6Q5VYS8 1495 aaKnown RBP33.97■■■■□ 3.03
LINC00683-201ENST00000578803 DCAF8L2P0C7V8 631 aa33.55■■■□□ 2.96
LINC00683-201ENST00000578803 ABCC9O60706 1549 aa33.4■■■□□ 2.94
LINC00683-201ENST00000578803 DCAF1Q9Y4B6 1507 aa33.36■■■□□ 2.93
LINC00683-201ENST00000578803 SHROOM4Q9ULL8 1493 aa33.15■■■□□ 2.9
LINC00683-201ENST00000578803 MYO15BQ96JP2 1530 aa32.94■■■□□ 2.86
LINC00683-201ENST00000578803 NACADO15069 1562 aa32.78■■■□□ 2.84
LINC00683-201ENST00000578803 RB1CC1Q8TDY2 1594 aa32.51■■■□□ 2.8
LINC00683-201ENST00000578803 SCRIBQ14160 1630 aa32.48■■■□□ 2.79
LINC00683-201ENST00000578803 SUPT5HO00267 1087 aaKnown RBP31.9■■■□□ 2.7
LINC00683-201ENST00000578803 UNC13AQ9UPW8 1703 aa31.9■■■□□ 2.7
LINC00683-201ENST00000578803 BICRAQ9NZM4 1560 aa31.58■■■□□ 2.65
LINC00683-201ENST00000578803 PABPN1Q86U42 306 aaKnown RBP eCLIP31.56■■■□□ 2.64
LINC00683-201ENST00000578803 CECR2Q9BXF3 1484 aa31.5■■■□□ 2.63
LINC00683-201ENST00000578803 RSF1Q96T23 1441 aaPredicted RBP31.41■■■□□ 2.62
LINC00683-201ENST00000578803 MROH2BQ7Z745 1585 aa31.29■■■□□ 2.6
LINC00683-201ENST00000578803 BAZ1AQ9NRL2 1556 aaPredicted RBP31.2■■■□□ 2.59
LINC00683-201ENST00000578803 SMARCA4P51532 1647 aa31.08■■■□□ 2.57
LINC00683-201ENST00000578803 WIZO95785 1651 aa31.03■■■□□ 2.56
LINC00683-201ENST00000578803 TOP2AP11388 1531 aaKnown RBP30.66■■■□□ 2.5
LINC00683-201ENST00000578803 PEG3Q9GZU2 1588 aa30.65■■■□□ 2.5
LINC00683-201ENST00000578803 EIF4G1Q04637 1599 aaKnown RBP30.62■■■□□ 2.49
LINC00683-201ENST00000578803 ATAD2BQ9ULI0 1458 aa30.58■■■□□ 2.49
LINC00683-201ENST00000578803 SMARCA2P51531 1590 aa30.52■■■□□ 2.48
LINC00683-201ENST00000578803 CHIC1Q5VXU3 224 aa30.5■■■□□ 2.47
LINC00683-201ENST00000578803 BAZ1BQ9UIG0 1483 aaKnown RBP30.41■■■□□ 2.46
LINC00683-201ENST00000578803 CCDC88BA6NC98 1476 aa30.39■■■□□ 2.46
LINC00683-201ENST00000578803 NCAPD3P42695 1498 aa30.28■■■□□ 2.44
LINC00683-201ENST00000578803 HMGXB3Q12766 1538 aa30.22■■■□□ 2.43
LINC00683-201ENST00000578803 CC2D2AQ9P2K1 1620 aa30.18■■■□□ 2.42
LINC00683-201ENST00000578803 TRIM41Q8WV44 630 aa29.93■■■□□ 2.38
LINC00683-201ENST00000578803 ABCC8Q09428 1581 aa29.8■■■□□ 2.36
LINC00683-201ENST00000578803 CFTRP13569 1480 aa29.64■■■□□ 2.33
LINC00683-201ENST00000578803 WRNQ14191 1432 aaPredicted RBP eCLIP29.56■■■□□ 2.32
LINC00683-201ENST00000578803 DNAJC5BQ9UF47 199 aa29.56■■■□□ 2.32
LINC00683-201ENST00000578803 CADPSQ9ULU8 1353 aa29.54■■■□□ 2.32
LINC00683-201ENST00000578803 FAM9AQ8IZU1 332 aaPredicted RBP29.47■■■□□ 2.31
LINC00683-201ENST00000578803 SYNJ1O43426 1573 aa29.45■■■□□ 2.3
LINC00683-201ENST00000578803 PRDM2Q13029 1718 aa29.42■■■□□ 2.3
LINC00683-201ENST00000578803 LOC105371045A0A1W2PR82 267 aa29.4■■■□□ 2.3
LINC00683-201ENST00000578803 NESP48681 1621 aa29.35■■■□□ 2.29
LINC00683-201ENST00000578803 TOP2BQ02880 1626 aa29.28■■■□□ 2.28
LINC00683-201ENST00000578803 SOGA1O94964 1423 aa29.25■■■□□ 2.27
LINC00683-201ENST00000578803 CUX1P39880 1505 aa29.24■■■□□ 2.27
LINC00683-201ENST00000578803 BIVM-ERCC5R4GMW8 1640 aa29.23■■■□□ 2.27
LINC00683-201ENST00000578803 LAMC3Q9Y6N6 1575 aa29.23■■■□□ 2.27
LINC00683-201ENST00000578803 FANCD2Q9BXW9 1451 aa29.22■■■□□ 2.27
LINC00683-201ENST00000578803 RUSC2Q8N2Y8 1516 aa29.16■■■□□ 2.26
LINC00683-201ENST00000578803 EHMT2Q96KQ7 1210 aa29.12■■■□□ 2.25
LINC00683-201ENST00000578803 EEA1Q15075 1411 aa29.07■■■□□ 2.24
LINC00683-201ENST00000578803 PDS5BQ9NTI5 1447 aa29.03■■■□□ 2.24
LINC00683-201ENST00000578803 CEP164Q9UPV0 1460 aa29.02■■■□□ 2.24
LINC00683-201ENST00000578803 CSRNP3Q8WYN3 585 aa29.01■■■□□ 2.23
LINC00683-201ENST00000578803 KIF21AQ7Z4S6 1674 aa28.93■■■□□ 2.22
LINC00683-201ENST00000578803 DNMBPQ6XZF7 1577 aa28.93■■■□□ 2.22
LINC00683-201ENST00000578803 FGD5Q6ZNL6 1462 aa28.92■■■□□ 2.22
LINC00683-201ENST00000578803 TOPBP1Q92547 1522 aa28.91■■■□□ 2.22
LINC00683-201ENST00000578803 URB2Q14146 1524 aaKnown RBP28.88■■■□□ 2.21
LINC00683-201ENST00000578803 KIF27Q86VH2 1401 aa28.79■■■□□ 2.2
LINC00683-201ENST00000578803 POLA1P09884 1462 aaPredicted RBP28.78■■■□□ 2.2
LINC00683-201ENST00000578803 CUX2O14529 1486 aa28.75■■■□□ 2.19
LINC00683-201ENST00000578803 RAD54L2Q9Y4B4 1467 aa28.73■■■□□ 2.19
LINC00683-201ENST00000578803 GOLGA3Q08378 1498 aa28.72■■■□□ 2.19
LINC00683-201ENST00000578803 KIF21BO75037 1637 aa28.72■■■□□ 2.19
LINC00683-201ENST00000578803 UBTFP17480 764 aaKnown RBP28.67■■■□□ 2.18
LINC00683-201ENST00000578803 MRC2Q9UBG0 1479 aa28.67■■■□□ 2.18
LINC00683-201ENST00000578803 TNIKQ9UKE5 1360 aa28.64■■■□□ 2.18
LINC00683-201ENST00000578803 RAPGEF2Q9Y4G8 1499 aa28.64■■■□□ 2.17
LINC00683-201ENST00000578803 ABCA10Q8WWZ4 1543 aa28.63■■■□□ 2.17
LINC00683-201ENST00000578803 ERCC6Q03468 1493 aa28.61■■■□□ 2.17
LINC00683-201ENST00000578803 PRXQ9BXM0 1461 aa28.61■■■□□ 2.17
LINC00683-201ENST00000578803 IGF1RP08069 1367 aa28.57■■■□□ 2.16
LINC00683-201ENST00000578803 CEP162Q5TB80 1403 aa28.52■■■□□ 2.16
LINC00683-201ENST00000578803 WDR97A6NE52 1622 aa28.52■■■□□ 2.16
LINC00683-201ENST00000578803 ERICH3Q5RHP9 1530 aa28.52■■■□□ 2.16
LINC00683-201ENST00000578803 WDR62O43379 1518 aa28.5■■■□□ 2.15
LINC00683-201ENST00000578803 TDRD9Q8NDG6 1382 aaKnown RBP28.46■■■□□ 2.15
LINC00683-201ENST00000578803 TARBP1Q13395 1621 aaKnown RBP28.46■■■□□ 2.15
LINC00683-201ENST00000578803 CARMIL1Q5VZK9 1371 aa28.42■■■□□ 2.14
LINC00683-201ENST00000578803 THOC2Q8NI27 1593 aaKnown RBP28.42■■■□□ 2.14
LINC00683-201ENST00000578803 ABCA5Q8WWZ7 1642 aa28.39■■■□□ 2.14
LINC00683-201ENST00000578803 GAPVD1Q14C86 1478 aa28.36■■■□□ 2.13
LINC00683-201ENST00000578803 IFT140Q96RY7 1462 aa28.31■■■□□ 2.12
LINC00683-201ENST00000578803 CLIP1P30622 1438 aa28.3■■■□□ 2.12
LINC00683-201ENST00000578803 RANGAP1P46060 587 aaPredicted RBP28.3■■■□□ 2.12
LINC00683-201ENST00000578803 CUL7Q14999 1698 aa28.27■■■□□ 2.12
LINC00683-201ENST00000578803 AQRO60306 1485 aaKnown RBP eCLIP28.27■■■□□ 2.12
LINC00683-201ENST00000578803 ZNF608Q9ULD9 1512 aaPredicted RBP28.23■■■□□ 2.11
LINC00683-201ENST00000578803 PBRM1Q86U86 1689 aa28.17■■■□□ 2.1
LINC00683-201ENST00000578803 GRIN2BQ13224 1484 aa28.12■■■□□ 2.09
LINC00683-201ENST00000578803 EIF4G3O43432 1585 aaKnown RBP28.08■■■□□ 2.09
LINC00683-201ENST00000578803 PPARGC1BQ86YN6 1023 aaKnown RBP28.07■■■□□ 2.08
LINC00683-201ENST00000578803 PCGF6Q9BYE7 350 aa28.04■■■□□ 2.08
LINC00683-201ENST00000578803 FHAD1B1AJZ9 1412 aa28.04■■■□□ 2.08
LINC00683-201ENST00000578803 VPS8Q8N3P4 1428 aa28.03■■■□□ 2.08
LINC00683-201ENST00000578803 ADAMTS12P58397 1594 aa28.02■■■□□ 2.08
LINC00683-201ENST00000578803 ARAP1Q96P48 1450 aa28.02■■■□□ 2.08
LINC00683-201ENST00000578803 ARHGAP35Q9NRY4 1499 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms