Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SOX6P35712 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SOX6P35712 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SOX6P35712 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
SOX6P35712 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SOX6P35712 AL023284.2-201ENST00000405850 579 ntBASIC15.62■□□□□ 0.09
SOX6P35712 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SOX6P35712 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.62■□□□□ 0.09
SOX6P35712 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SOX6P35712 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.62■□□□□ 0.09
SOX6P35712 RN7SL471P-201ENST00000580476 299 ntBASIC15.62■□□□□ 0.09
SOX6P35712 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.62■□□□□ 0.09
SOX6P35712 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.62■□□□□ 0.09
SOX6P35712 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SOX6P35712 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SOX6P35712 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SOX6P35712 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SOX6P35712 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SOX6P35712 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SOX6P35712 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SOX6P35712 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SOX6P35712 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SOX6P35712 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SOX6P35712 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
SOX6P35712 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SOX6P35712 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.61■□□□□ 0.09
SOX6P35712 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX6P35712 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX6P35712 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.61■□□□□ 0.09
SOX6P35712 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX6P35712 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SOX6P35712 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX6P35712 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX6P35712 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.61■□□□□ 0.09
SOX6P35712 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX6P35712 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SOX6P35712 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX6P35712 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.61■□□□□ 0.09
SOX6P35712 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX6P35712 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.61■□□□□ 0.09
SOX6P35712 C1QBPP2-201ENST00000528754 825 ntBASIC15.61■□□□□ 0.09
SOX6P35712 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.61■□□□□ 0.09
SOX6P35712 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.61■□□□□ 0.09
SOX6P35712 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.61■□□□□ 0.09
SOX6P35712 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.61■□□□□ 0.09
SOX6P35712 AL023875.1-201ENST00000640777 796 ntBASIC15.61■□□□□ 0.09
SOX6P35712 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SOX6P35712 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.61■□□□□ 0.09
SOX6P35712 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SOX6P35712 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX6P35712 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.61■□□□□ 0.09
SOX6P35712 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
SOX6P35712 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
SOX6P35712 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
SOX6P35712 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SOX6P35712 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX6P35712 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX6P35712 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX6P35712 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SOX6P35712 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
SOX6P35712 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX6P35712 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX6P35712 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX6P35712 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX6P35712 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX6P35712 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX6P35712 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SOX6P35712 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX6P35712 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.6■□□□□ 0.09
SOX6P35712 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX6P35712 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.6■□□□□ 0.09
SOX6P35712 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SOX6P35712 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX6P35712 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.6■□□□□ 0.09
SOX6P35712 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.6■□□□□ 0.09
SOX6P35712 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.6■□□□□ 0.09
SOX6P35712 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX6P35712 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX6P35712 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX6P35712 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX6P35712 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX6P35712 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SOX6P35712 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.6■□□□□ 0.09
SOX6P35712 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.6■□□□□ 0.09
SOX6P35712 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.6■□□□□ 0.09
SOX6P35712 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.6■□□□□ 0.09
SOX6P35712 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.6■□□□□ 0.09
SOX6P35712 AC091390.4-202ENST00000476426 537 ntBASIC15.6■□□□□ 0.09
SOX6P35712 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX6P35712 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.6■□□□□ 0.09
SOX6P35712 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SOX6P35712 AL445675.2-201ENST00000620291 557 ntBASIC15.6■□□□□ 0.09
SOX6P35712 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.6■□□□□ 0.09
SOX6P35712 TMEM191A-211ENST00000637163 1067 ntBASIC15.6■□□□□ 0.09
SOX6P35712 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX6P35712 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX6P35712 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SOX6P35712 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SOX6P35712 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.6■□□□□ 0.09
SOX6P35712 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms