RNA–Protein interactions for RNA: ENST00000379031.9

PUSL1-201, Transcript of pseudouridylate synthase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUSL1, Length 1,287 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUSL1-201ENST00000379031 NISCHQ9Y2I1 1504 aa49.51■■■■■ 5.52
PUSL1-201ENST00000379031 CCDC180Q9P1Z9 1646 aa44.21■■■■■ 4.67
PUSL1-201ENST00000379031 ABCC9O60706 1549 aa44.08■■■■■ 4.65
PUSL1-201ENST00000379031 RB1CC1Q8TDY2 1594 aa41.96■■■■■ 4.31
PUSL1-201ENST00000379031 DCAF8L2P0C7V8 631 aa41.77■■■■■ 4.28
PUSL1-201ENST00000379031 NACADO15069 1562 aa41.72■■■■■ 4.27
PUSL1-201ENST00000379031 MYO15BQ96JP2 1530 aa41.19■■■■■ 4.18
PUSL1-201ENST00000379031 PABPN1Q86U42 306 aaKnown RBP eCLIP41.13■■■■■ 4.17
PUSL1-201ENST00000379031 ZCCHC6Q5VYS8 1495 aaKnown RBP41.11■■■■■ 4.17
PUSL1-201ENST00000379031 DNAJC5BQ9UF47 199 aa41.09■■■■■ 4.17
PUSL1-201ENST00000379031 UNC13AQ9UPW8 1703 aa41.05■■■■■ 4.16
PUSL1-201ENST00000379031 DCAF1Q9Y4B6 1507 aa40.83■■■■■ 4.13
PUSL1-201ENST00000379031 BICRAQ9NZM4 1560 aa40.8■■■■■ 4.12
PUSL1-201ENST00000379031 SCRIBQ14160 1630 aa40.47■■■■■ 4.07
PUSL1-201ENST00000379031 SHROOM4Q9ULL8 1493 aa40.12■■■■■ 4.01
PUSL1-201ENST00000379031 CC2D2AQ9P2K1 1620 aa39.76■■■■□ 3.96
PUSL1-201ENST00000379031 EIF4G1Q04637 1599 aaKnown RBP39.76■■■■□ 3.95
PUSL1-201ENST00000379031 CECR2Q9BXF3 1484 aa39.62■■■■□ 3.93
PUSL1-201ENST00000379031 SMARCA4P51532 1647 aa38.56■■■■□ 3.76
PUSL1-201ENST00000379031 NCAPD3P42695 1498 aa38.54■■■■□ 3.76
PUSL1-201ENST00000379031 ATAD2BQ9ULI0 1458 aa38.53■■■■□ 3.76
PUSL1-201ENST00000379031 BAZ1AQ9NRL2 1556 aaPredicted RBP38.38■■■■□ 3.73
PUSL1-201ENST00000379031 SMARCA2P51531 1590 aa38.37■■■■□ 3.73
PUSL1-201ENST00000379031 HMGXB3Q12766 1538 aa38.28■■■■□ 3.72
PUSL1-201ENST00000379031 MROH2BQ7Z745 1585 aa38.23■■■■□ 3.71
PUSL1-201ENST00000379031 BAZ1BQ9UIG0 1483 aaKnown RBP38.17■■■■□ 3.7
PUSL1-201ENST00000379031 PEG3Q9GZU2 1588 aa38.11■■■■□ 3.69
PUSL1-201ENST00000379031 ERCC6Q03468 1493 aa37.98■■■■□ 3.67
PUSL1-201ENST00000379031 NESP48681 1621 aa37.98■■■■□ 3.67
PUSL1-201ENST00000379031 WIZO95785 1651 aa37.78■■■■□ 3.64
PUSL1-201ENST00000379031 CUX2O14529 1486 aa37.71■■■■□ 3.63
PUSL1-201ENST00000379031 LAMC3Q9Y6N6 1575 aa37.6■■■■□ 3.61
PUSL1-201ENST00000379031 RSF1Q96T23 1441 aaPredicted RBP37.53■■■■□ 3.6
PUSL1-201ENST00000379031 THOC2Q8NI27 1593 aaKnown RBP37.44■■■■□ 3.58
PUSL1-201ENST00000379031 KIF21AQ7Z4S6 1674 aa37.44■■■■□ 3.58
PUSL1-201ENST00000379031 CADPSQ9ULU8 1353 aa37.42■■■■□ 3.58
PUSL1-201ENST00000379031 PDS5BQ9NTI5 1447 aa37.39■■■■□ 3.58
PUSL1-201ENST00000379031 DNAJC5Q9H3Z4 198 aa37.37■■■■□ 3.57
PUSL1-201ENST00000379031 TOP2AP11388 1531 aaKnown RBP37.27■■■■□ 3.56
PUSL1-201ENST00000379031 MRC2Q9UBG0 1479 aa37.1■■■■□ 3.53
PUSL1-201ENST00000379031 CFTRP13569 1480 aa37.05■■■■□ 3.52
PUSL1-201ENST00000379031 FANCD2Q9BXW9 1451 aa37.02■■■■□ 3.52
PUSL1-201ENST00000379031 CEP164Q9UPV0 1460 aa37.01■■■■□ 3.52
PUSL1-201ENST00000379031 WDR62O43379 1518 aa36.98■■■■□ 3.51
PUSL1-201ENST00000379031 CCDC88BA6NC98 1476 aa36.88■■■■□ 3.5
PUSL1-201ENST00000379031 URB2Q14146 1524 aaKnown RBP36.74■■■■□ 3.47
PUSL1-201ENST00000379031 PRDM2Q13029 1718 aa36.65■■■■□ 3.46
PUSL1-201ENST00000379031 TOPBP1Q92547 1522 aa36.36■■■■□ 3.41
PUSL1-201ENST00000379031 ZNF608Q9ULD9 1512 aaPredicted RBP36.26■■■■□ 3.4
PUSL1-201ENST00000379031 IFT140Q96RY7 1462 aa36.24■■■■□ 3.39
PUSL1-201ENST00000379031 DNMBPQ6XZF7 1577 aa36.23■■■■□ 3.39
PUSL1-201ENST00000379031 SUPT5HO00267 1087 aaKnown RBP36.2■■■■□ 3.39
PUSL1-201ENST00000379031 ABCC8Q09428 1581 aa36.18■■■■□ 3.38
PUSL1-201ENST00000379031 OSCARQ8IYS5 282 aa36.08■■■■□ 3.37
PUSL1-201ENST00000379031 EIF4G3O43432 1585 aaKnown RBP36.02■■■■□ 3.36
PUSL1-201ENST00000379031 POLA1P09884 1462 aaPredicted RBP36.02■■■■□ 3.36
PUSL1-201ENST00000379031 TRIM41Q8WV44 630 aa36■■■■□ 3.35
PUSL1-201ENST00000379031 TARBP1Q13395 1621 aaKnown RBP36■■■■□ 3.35
PUSL1-201ENST00000379031 AQRO60306 1485 aaKnown RBP eCLIP35.96■■■■□ 3.357e-7■■■■■ 26.9
PUSL1-201ENST00000379031 RAD54L2Q9Y4B4 1467 aa35.94■■■■□ 3.34
PUSL1-201ENST00000379031 CUX1P39880 1505 aa35.89■■■■□ 3.34
PUSL1-201ENST00000379031 FGD5Q6ZNL6 1462 aa35.86■■■■□ 3.33
PUSL1-201ENST00000379031 SOGA1O94964 1423 aa35.84■■■■□ 3.33
PUSL1-201ENST00000379031 TDRD9Q8NDG6 1382 aaKnown RBP35.79■■■■□ 3.32
PUSL1-201ENST00000379031 CHD1O14646 1710 aa35.69■■■■□ 3.3
PUSL1-201ENST00000379031 FBLN2P98095 1184 aa35.67■■■■□ 3.3
PUSL1-201ENST00000379031 RIMBP3CA6NJZ7 1639 aa35.63■■■■□ 3.29
PUSL1-201ENST00000379031 RIMBP3BA6NNM3 1639 aa35.63■■■■□ 3.29
PUSL1-201ENST00000379031 RIMBP3Q9UFD9 1639 aa35.63■■■■□ 3.29
PUSL1-201ENST00000379031 SNAPC4Q5SXM2 1469 aa35.59■■■■□ 3.29
PUSL1-201ENST00000379031 ARHGEF11O15085 1522 aa35.54■■■■□ 3.28
PUSL1-201ENST00000379031 WDR97A6NE52 1622 aa35.54■■■■□ 3.28
PUSL1-201ENST00000379031 GRIN2BQ13224 1484 aa35.48■■■■□ 3.27
PUSL1-201ENST00000379031 GAPVD1Q14C86 1478 aa35.41■■■■□ 3.26
PUSL1-201ENST00000379031 MAGI1Q96QZ7 1491 aaPredicted RBP35.41■■■■□ 3.26
PUSL1-201ENST00000379031 ABCA10Q8WWZ4 1543 aa35.41■■■■□ 3.26
PUSL1-201ENST00000379031 CHMP7Q8WUX9 453 aaPredicted RBP35.4■■■■□ 3.26
PUSL1-201ENST00000379031 SYNJ1O43426 1573 aa35.38■■■■□ 3.25
PUSL1-201ENST00000379031 WRNQ14191 1432 aaPredicted RBP eCLIP35.38■■■■□ 3.25
PUSL1-201ENST00000379031 PBRM1Q86U86 1689 aa35.37■■■■□ 3.25
PUSL1-201ENST00000379031 ABCA5Q8WWZ7 1642 aa35.35■■■■□ 3.25
PUSL1-201ENST00000379031 TOP2BQ02880 1626 aa35.34■■■■□ 3.25
PUSL1-201ENST00000379031 BIVM-ERCC5R4GMW8 1640 aa35.33■■■■□ 3.25
PUSL1-201ENST00000379031 SYNJ2O15056 1496 aa35.32■■■■□ 3.24
PUSL1-201ENST00000379031 CYB5RLQ6IPT4 315 aa35.3■■■■□ 3.24
PUSL1-201ENST00000379031 CLASP1Q7Z460 1538 aa35.27■■■■□ 3.24
PUSL1-201ENST00000379031 ARAP1Q96P48 1450 aa35.24■■■■□ 3.23
PUSL1-201ENST00000379031 ADAMTS12P58397 1594 aa35.08■■■■□ 3.21
PUSL1-201ENST00000379031 GRIN2AQ12879 1464 aa35.03■■■■□ 3.2
PUSL1-201ENST00000379031 FHAD1B1AJZ9 1412 aa34.96■■■■□ 3.19
PUSL1-201ENST00000379031 ERICH3Q5RHP9 1530 aa34.95■■■■□ 3.19
PUSL1-201ENST00000379031 CEP170Q5SW79 1584 aa34.93■■■■□ 3.18
PUSL1-201ENST00000379031 NUP160Q12769 1436 aa34.89■■■■□ 3.18
PUSL1-201ENST00000379031 ERCC6L2Q5T890 1561 aa34.84■■■■□ 3.17
PUSL1-201ENST00000379031 TRHP20396 242 aaPredicted RBP34.8■■■■□ 3.16
PUSL1-201ENST00000379031 SHROOM2Q13796 1616 aa34.68■■■■□ 3.14
PUSL1-201ENST00000379031 KIF27Q86VH2 1401 aa34.65■■■■□ 3.14
PUSL1-201ENST00000379031 IGF1RP08069 1367 aa34.64■■■■□ 3.14
PUSL1-201ENST00000379031 PRG4Q92954 1404 aaPredicted RBP34.57■■■■□ 3.13
PUSL1-201ENST00000379031 RUSC2Q8N2Y8 1516 aa34.57■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms