RNA–Protein interactions for RNA: ENST00000349718.8

CMTM7-202, Transcript of CKLF like MARVEL transmembrane domain containing 7, humanhuman

TSL 1 (best) BASIC

Gene CMTM7, Length 1,214 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM7-202ENST00000349718 NISCHQ9Y2I1 1504 aa48.78■■■■■ 5.4
CMTM7-202ENST00000349718 CCDC180Q9P1Z9 1646 aa43.65■■■■■ 4.58
CMTM7-202ENST00000349718 ABCC9O60706 1549 aa43.07■■■■■ 4.49
CMTM7-202ENST00000349718 RB1CC1Q8TDY2 1594 aa41.29■■■■■ 4.2
CMTM7-202ENST00000349718 NACADO15069 1562 aa41.11■■■■■ 4.17
CMTM7-202ENST00000349718 DCAF8L2P0C7V8 631 aa40.97■■■■■ 4.15
CMTM7-202ENST00000349718 MYO15BQ96JP2 1530 aa40.68■■■■■ 4.1
CMTM7-202ENST00000349718 ZCCHC6Q5VYS8 1495 aaKnown RBP40.53■■■■■ 4.08
CMTM7-202ENST00000349718 UNC13AQ9UPW8 1703 aa40.4■■■■■ 4.06
CMTM7-202ENST00000349718 DCAF1Q9Y4B6 1507 aa40.35■■■■■ 4.05
CMTM7-202ENST00000349718 PABPN1Q86U42 306 aaKnown RBP eCLIP40.15■■■■■ 4.02
CMTM7-202ENST00000349718 BICRAQ9NZM4 1560 aa40■■■■□ 3.99
CMTM7-202ENST00000349718 DNAJC5BQ9UF47 199 aa39.88■■■■□ 3.97
CMTM7-202ENST00000349718 SCRIBQ14160 1630 aa39.76■■■■□ 3.95
CMTM7-202ENST00000349718 SHROOM4Q9ULL8 1493 aa39.56■■■■□ 3.92
CMTM7-202ENST00000349718 EIF4G1Q04637 1599 aaKnown RBP39■■■■□ 3.83
CMTM7-202ENST00000349718 CC2D2AQ9P2K1 1620 aa38.98■■■■□ 3.83
CMTM7-202ENST00000349718 CECR2Q9BXF3 1484 aa38.76■■■■□ 3.8
CMTM7-202ENST00000349718 SMARCA4P51532 1647 aa37.98■■■■□ 3.67
CMTM7-202ENST00000349718 NCAPD3P42695 1498 aa37.9■■■■□ 3.66
CMTM7-202ENST00000349718 BAZ1AQ9NRL2 1556 aaPredicted RBP37.87■■■■□ 3.65
CMTM7-202ENST00000349718 ATAD2BQ9ULI0 1458 aa37.84■■■■□ 3.65
CMTM7-202ENST00000349718 SMARCA2P51531 1590 aa37.83■■■■□ 3.65
CMTM7-202ENST00000349718 HMGXB3Q12766 1538 aa37.7■■■■□ 3.63
CMTM7-202ENST00000349718 PEG3Q9GZU2 1588 aa37.59■■■■□ 3.61
CMTM7-202ENST00000349718 MROH2BQ7Z745 1585 aa37.58■■■■□ 3.61
CMTM7-202ENST00000349718 BAZ1BQ9UIG0 1483 aaKnown RBP37.54■■■■□ 3.6
CMTM7-202ENST00000349718 WIZO95785 1651 aa37.2■■■■□ 3.55
CMTM7-202ENST00000349718 ERCC6Q03468 1493 aa37.2■■■■□ 3.54
CMTM7-202ENST00000349718 NESP48681 1621 aa37.13■■■■□ 3.53
CMTM7-202ENST00000349718 LAMC3Q9Y6N6 1575 aa37.03■■■■□ 3.52
CMTM7-202ENST00000349718 RSF1Q96T23 1441 aaPredicted RBP36.96■■■■□ 3.51
CMTM7-202ENST00000349718 CUX2O14529 1486 aa36.95■■■■□ 3.51
CMTM7-202ENST00000349718 PDS5BQ9NTI5 1447 aa36.77■■■■□ 3.48
CMTM7-202ENST00000349718 CADPSQ9ULU8 1353 aa36.77■■■■□ 3.48
CMTM7-202ENST00000349718 KIF21AQ7Z4S6 1674 aa36.76■■■■□ 3.47
CMTM7-202ENST00000349718 TOP2AP11388 1531 aaKnown RBP36.75■■■■□ 3.47
CMTM7-202ENST00000349718 THOC2Q8NI27 1593 aaKnown RBP36.7■■■■□ 3.47
CMTM7-202ENST00000349718 CFTRP13569 1480 aa36.45■■■■□ 3.43
CMTM7-202ENST00000349718 MRC2Q9UBG0 1479 aa36.41■■■■□ 3.42
CMTM7-202ENST00000349718 CEP164Q9UPV0 1460 aa36.38■■■■□ 3.41
CMTM7-202ENST00000349718 FANCD2Q9BXW9 1451 aa36.37■■■■□ 3.41
CMTM7-202ENST00000349718 DNAJC5Q9H3Z4 198 aa36.32■■■■□ 3.4
CMTM7-202ENST00000349718 WDR62O43379 1518 aa36.31■■■■□ 3.4
CMTM7-202ENST00000349718 CCDC88BA6NC98 1476 aa36.3■■■■□ 3.4
CMTM7-202ENST00000349718 PRDM2Q13029 1718 aa36.29■■■■□ 3.4
CMTM7-202ENST00000349718 URB2Q14146 1524 aaKnown RBP36.02■■■■□ 3.36
CMTM7-202ENST00000349718 ABCC8Q09428 1581 aa35.74■■■■□ 3.31
CMTM7-202ENST00000349718 TOPBP1Q92547 1522 aa35.73■■■■□ 3.31
CMTM7-202ENST00000349718 SUPT5HO00267 1087 aaKnown RBP35.72■■■■□ 3.31
CMTM7-202ENST00000349718 DNMBPQ6XZF7 1577 aa35.68■■■■□ 3.3
CMTM7-202ENST00000349718 IFT140Q96RY7 1462 aa35.63■■■■□ 3.29
CMTM7-202ENST00000349718 ZNF608Q9ULD9 1512 aaPredicted RBP35.47■■■■□ 3.27
CMTM7-202ENST00000349718 TARBP1Q13395 1621 aaKnown RBP35.39■■■■□ 3.26
CMTM7-202ENST00000349718 POLA1P09884 1462 aaPredicted RBP35.39■■■■□ 3.26
CMTM7-202ENST00000349718 EIF4G3O43432 1585 aaKnown RBP35.37■■■■□ 3.25
CMTM7-202ENST00000349718 OSCARQ8IYS5 282 aa35.33■■■■□ 3.25
CMTM7-202ENST00000349718 CUX1P39880 1505 aa35.29■■■■□ 3.24
CMTM7-202ENST00000349718 FGD5Q6ZNL6 1462 aa35.25■■■■□ 3.23
CMTM7-202ENST00000349718 SOGA1O94964 1423 aa35.24■■■■□ 3.23
CMTM7-202ENST00000349718 RAD54L2Q9Y4B4 1467 aa35.23■■■■□ 3.23
CMTM7-202ENST00000349718 AQRO60306 1485 aaKnown RBP eCLIP35.22■■■■□ 3.23
CMTM7-202ENST00000349718 WDR97A6NE52 1622 aa35.13■■■■□ 3.21
CMTM7-202ENST00000349718 TDRD9Q8NDG6 1382 aaKnown RBP35.08■■■■□ 3.21
CMTM7-202ENST00000349718 CHD1O14646 1710 aa35.06■■■■□ 3.2
CMTM7-202ENST00000349718 TRIM41Q8WV44 630 aa34.96■■■■□ 3.19
CMTM7-202ENST00000349718 FBLN2P98095 1184 aa34.93■■■■□ 3.18
CMTM7-202ENST00000349718 BIVM-ERCC5R4GMW8 1640 aa34.92■■■■□ 3.18
CMTM7-202ENST00000349718 SNAPC4Q5SXM2 1469 aa34.9■■■■□ 3.18
CMTM7-202ENST00000349718 TOP2BQ02880 1626 aa34.9■■■■□ 3.18
CMTM7-202ENST00000349718 GRIN2BQ13224 1484 aa34.9■■■■□ 3.18
CMTM7-202ENST00000349718 WRNQ14191 1432 aaPredicted RBP eCLIP34.89■■■■□ 3.18
CMTM7-202ENST00000349718 ABCA10Q8WWZ4 1543 aa34.88■■■■□ 3.17
CMTM7-202ENST00000349718 PBRM1Q86U86 1689 aa34.88■■■■□ 3.17
CMTM7-202ENST00000349718 MAGI1Q96QZ7 1491 aaPredicted RBP34.85■■■■□ 3.17
CMTM7-202ENST00000349718 RIMBP3CA6NJZ7 1639 aa34.85■■■■□ 3.17
CMTM7-202ENST00000349718 RIMBP3BA6NNM3 1639 aa34.85■■■■□ 3.17
CMTM7-202ENST00000349718 RIMBP3Q9UFD9 1639 aa34.85■■■■□ 3.17
CMTM7-202ENST00000349718 SYNJ1O43426 1573 aa34.85■■■■□ 3.17
CMTM7-202ENST00000349718 GAPVD1Q14C86 1478 aa34.84■■■■□ 3.17
CMTM7-202ENST00000349718 ABCA5Q8WWZ7 1642 aa34.81■■■■□ 3.16
CMTM7-202ENST00000349718 ARHGEF11O15085 1522 aa34.76■■■■□ 3.16
CMTM7-202ENST00000349718 CHMP7Q8WUX9 453 aaPredicted RBP34.76■■■■□ 3.16
CMTM7-202ENST00000349718 SYNJ2O15056 1496 aa34.72■■■■□ 3.15
CMTM7-202ENST00000349718 CLASP1Q7Z460 1538 aa34.6■■■■□ 3.13
CMTM7-202ENST00000349718 ADAMTS12P58397 1594 aa34.52■■■■□ 3.12
CMTM7-202ENST00000349718 ERICH3Q5RHP9 1530 aa34.48■■■■□ 3.11
CMTM7-202ENST00000349718 CYB5RLQ6IPT4 315 aa34.46■■■■□ 3.11
CMTM7-202ENST00000349718 GRIN2AQ12879 1464 aa34.44■■■■□ 3.1
CMTM7-202ENST00000349718 ARAP1Q96P48 1450 aa34.44■■■■□ 3.1
CMTM7-202ENST00000349718 FHAD1B1AJZ9 1412 aa34.41■■■■□ 3.1
CMTM7-202ENST00000349718 CEP170Q5SW79 1584 aa34.3■■■■□ 3.08
CMTM7-202ENST00000349718 NUP160Q12769 1436 aa34.29■■■■□ 3.08
CMTM7-202ENST00000349718 KIF27Q86VH2 1401 aa34.21■■■■□ 3.07
CMTM7-202ENST00000349718 CUL7Q14999 1698 aa34.12■■■■□ 3.05
CMTM7-202ENST00000349718 SHROOM2Q13796 1616 aa34.12■■■■□ 3.05
CMTM7-202ENST00000349718 IGF1RP08069 1367 aa34.09■■■■□ 3.05
CMTM7-202ENST00000349718 ERCC6L2Q5T890 1561 aa34.07■■■■□ 3.05
CMTM7-202ENST00000349718 RUSC2Q8N2Y8 1516 aa34.01■■■■□ 3.04
CMTM7-202ENST00000349718 TRHP20396 242 aaPredicted RBP33.95■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms