Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.41■□□□□ 0.38
CBX6O95503 CKBP1-201ENST00000565489 1086 ntBASIC17.41■□□□□ 0.38
CBX6O95503 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CBX6O95503 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CBX6O95503 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.41■□□□□ 0.38
CBX6O95503 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.41■□□□□ 0.38
CBX6O95503 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX6O95503 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX6O95503 AC132872.4-202ENST00000622924 2756 ntBASIC17.41■□□□□ 0.38
CBX6O95503 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX6O95503 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
CBX6O95503 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX6O95503 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CBX6O95503 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX6O95503 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.41■□□□□ 0.38
CBX6O95503 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CBX6O95503 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CBX6O95503 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CBX6O95503 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CBX6O95503 AC005915.1-201ENST00000624912 2018 ntBASIC17.4■□□□□ 0.38
CBX6O95503 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 OR6D1P-203ENST00000641209 4860 ntBASIC17.4■□□□□ 0.38
CBX6O95503 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CBX6O95503 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.4■□□□□ 0.38
CBX6O95503 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CBX6O95503 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CBX6O95503 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.4■□□□□ 0.38
CBX6O95503 KRT18P38-201ENST00000449496 1282 ntBASIC17.4■□□□□ 0.38
CBX6O95503 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.4■□□□□ 0.38
CBX6O95503 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.4■□□□□ 0.38
CBX6O95503 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.4■□□□□ 0.38
CBX6O95503 AL136038.3-201ENST00000561909 1096 ntBASIC17.4■□□□□ 0.38
CBX6O95503 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CBX6O95503 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.4■□□□□ 0.38
CBX6O95503 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CBX6O95503 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CBX6O95503 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.4■□□□□ 0.38
CBX6O95503 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CBX6O95503 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CBX6O95503 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.4■□□□□ 0.38
CBX6O95503 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CBX6O95503 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CBX6O95503 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CBX6O95503 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.39■□□□□ 0.38
CBX6O95503 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CBX6O95503 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CBX6O95503 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CBX6O95503 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.39■□□□□ 0.37
CBX6O95503 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX6O95503 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX6O95503 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX6O95503 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.39■□□□□ 0.37
CBX6O95503 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CBX6O95503 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX6O95503 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.39■□□□□ 0.37
CBX6O95503 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CBX6O95503 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX6O95503 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX6O95503 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CBX6O95503 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX6O95503 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX6O95503 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.39■□□□□ 0.37
CBX6O95503 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.39■□□□□ 0.37
CBX6O95503 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.39■□□□□ 0.37
CBX6O95503 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CBX6O95503 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX6O95503 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX6O95503 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.39■□□□□ 0.37
CBX6O95503 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.39■□□□□ 0.37
CBX6O95503 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CBX6O95503 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CBX6O95503 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX6O95503 GPAT2P1-201ENST00000444924 1672 ntBASIC17.39■□□□□ 0.37
CBX6O95503 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBX6O95503 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBX6O95503 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CBX6O95503 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms