Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 DNAJB3-201ENST00000446806 729 ntBASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 AC006116.8-202ENST00000587620 1550 ntBASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRGV5A0A0B4J1U4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 LINC00304-203ENST00000565008 1864 ntBASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 AC023274.1-201ENST00000418278 595 ntBASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 MIR3687-2-201ENST00000577708 61 ntBASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 MIR3687-1-201ENST00000614492 61 ntBASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 PI4KAP1-204ENST00000612579 1703 ntBASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRGV5A0A0B4J1U4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRGV5A0A0B4J1U4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRGV5A0A0B4J1U4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRGV5A0A0B4J1U4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRGV5A0A0B4J1U4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRGV5A0A0B4J1U4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.58■□□□□ 0.09
TRGV5A0A0B4J1U4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
TRGV5A0A0B4J1U4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRGV5A0A0B4J1U4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.09
TRGV5A0A0B4J1U4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.58■□□□□ 0.09
TRGV5A0A0B4J1U4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 YBX2P1-201ENST00000394192 760 ntBASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 KRT18P2-201ENST00000447938 1258 ntBASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 AC010654.1-201ENST00000615722 808 ntBASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms