Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
TRGV5A0A0B4J1U4 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC30.3■■■□□ 2.44
TRGV5A0A0B4J1U4 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TRGV5A0A0B4J1U4 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
TRGV5A0A0B4J1U4 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
TRGV5A0A0B4J1U4 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
TRGV5A0A0B4J1U4 AL356512.1-201ENST00000607453 1739 ntBASIC29.99■■■□□ 2.39
TRGV5A0A0B4J1U4 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC29.77■■■□□ 2.36
TRGV5A0A0B4J1U4 HES6-203ENST00000409160 1600 ntTSL 2 BASIC29.25■■■□□ 2.27
TRGV5A0A0B4J1U4 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC29.24■■■□□ 2.27
TRGV5A0A0B4J1U4 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
TRGV5A0A0B4J1U4 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC29.07■■■□□ 2.24
TRGV5A0A0B4J1U4 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.01■■■□□ 2.23
TRGV5A0A0B4J1U4 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC28.98■■■□□ 2.23
TRGV5A0A0B4J1U4 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.93■■■□□ 2.22
TRGV5A0A0B4J1U4 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC28.92■■■□□ 2.22
TRGV5A0A0B4J1U4 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC28.83■■■□□ 2.21
TRGV5A0A0B4J1U4 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
TRGV5A0A0B4J1U4 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
TRGV5A0A0B4J1U4 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
TRGV5A0A0B4J1U4 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
TRGV5A0A0B4J1U4 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
TRGV5A0A0B4J1U4 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC28.36■■■□□ 2.13
TRGV5A0A0B4J1U4 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TRGV5A0A0B4J1U4 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRGV5A0A0B4J1U4 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TRGV5A0A0B4J1U4 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TRGV5A0A0B4J1U4 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.08■■■□□ 2.09
TRGV5A0A0B4J1U4 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TRGV5A0A0B4J1U4 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
TRGV5A0A0B4J1U4 INO80B-203ENST00000409917 796 ntTSL 2 BASIC27.92■■■□□ 2.06
TRGV5A0A0B4J1U4 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
TRGV5A0A0B4J1U4 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
TRGV5A0A0B4J1U4 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
TRGV5A0A0B4J1U4 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
TRGV5A0A0B4J1U4 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC27.74■■■□□ 2.03
TRGV5A0A0B4J1U4 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TRGV5A0A0B4J1U4 AC015813.7-201ENST00000623294 581 ntBASIC27.57■■■□□ 2
TRGV5A0A0B4J1U4 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TRGV5A0A0B4J1U4 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TRGV5A0A0B4J1U4 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC27.48■■□□□ 1.99
TRGV5A0A0B4J1U4 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
TRGV5A0A0B4J1U4 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC27.47■■□□□ 1.99
TRGV5A0A0B4J1U4 AC006077.2-201ENST00000623591 457 ntBASIC27.41■■□□□ 1.98
TRGV5A0A0B4J1U4 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TRGV5A0A0B4J1U4 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC27.34■■□□□ 1.97
TRGV5A0A0B4J1U4 ZNRF2P1-201ENST00000441407 443 ntBASIC27.33■■□□□ 1.97
TRGV5A0A0B4J1U4 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC27.33■■□□□ 1.97
TRGV5A0A0B4J1U4 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
TRGV5A0A0B4J1U4 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC27.23■■□□□ 1.95
TRGV5A0A0B4J1U4 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.18■■□□□ 1.94
TRGV5A0A0B4J1U4 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
TRGV5A0A0B4J1U4 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC27.15■■□□□ 1.94
TRGV5A0A0B4J1U4 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TRGV5A0A0B4J1U4 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
TRGV5A0A0B4J1U4 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
TRGV5A0A0B4J1U4 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
TRGV5A0A0B4J1U4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
TRGV5A0A0B4J1U4 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
TRGV5A0A0B4J1U4 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
TRGV5A0A0B4J1U4 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
TRGV5A0A0B4J1U4 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TRGV5A0A0B4J1U4 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC26.89■■□□□ 1.9
TRGV5A0A0B4J1U4 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TRGV5A0A0B4J1U4 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
TRGV5A0A0B4J1U4 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TRGV5A0A0B4J1U4 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
TRGV5A0A0B4J1U4 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TRGV5A0A0B4J1U4 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.7■■□□□ 1.86
TRGV5A0A0B4J1U4 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
TRGV5A0A0B4J1U4 AP002365.1-201ENST00000603448 772 ntBASIC26.68■■□□□ 1.86
TRGV5A0A0B4J1U4 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
TRGV5A0A0B4J1U4 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TRGV5A0A0B4J1U4 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TRGV5A0A0B4J1U4 ILK-212ENST00000532063 1617 ntTSL 2 BASIC26.55■■□□□ 1.84
TRGV5A0A0B4J1U4 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.55■■□□□ 1.84
TRGV5A0A0B4J1U4 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC26.55■■□□□ 1.84
TRGV5A0A0B4J1U4 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.54■■□□□ 1.84
TRGV5A0A0B4J1U4 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRGV5A0A0B4J1U4 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.51■■□□□ 1.83
TRGV5A0A0B4J1U4 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TRGV5A0A0B4J1U4 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.48■■□□□ 1.83
TRGV5A0A0B4J1U4 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TRGV5A0A0B4J1U4 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.83
TRGV5A0A0B4J1U4 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.44■■□□□ 1.82
TRGV5A0A0B4J1U4 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
TRGV5A0A0B4J1U4 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TRGV5A0A0B4J1U4 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRGV5A0A0B4J1U4 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.81
TRGV5A0A0B4J1U4 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRGV5A0A0B4J1U4 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TRGV5A0A0B4J1U4 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRGV5A0A0B4J1U4 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.35■■□□□ 1.81
TRGV5A0A0B4J1U4 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.33■■□□□ 1.81
TRGV5A0A0B4J1U4 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRGV5A0A0B4J1U4 DYNLL1-208ENST00000550178 581 ntBASIC26.33■■□□□ 1.81
TRGV5A0A0B4J1U4 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
TRGV5A0A0B4J1U4 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRGV5A0A0B4J1U4 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.3■■□□□ 1.8
TRGV5A0A0B4J1U4 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms