Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.61■□□□□ 0.41
RETP07949 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RETP07949 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.61■□□□□ 0.41
RETP07949 SIGLEC16-201ENST00000599858 1437 ntBASIC17.61■□□□□ 0.41
RETP07949 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RETP07949 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RETP07949 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RETP07949 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RETP07949 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.6■□□□□ 0.41
RETP07949 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RETP07949 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RETP07949 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RETP07949 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RETP07949 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.6■□□□□ 0.41
RETP07949 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.6■□□□□ 0.41
RETP07949 ACTG1P14-201ENST00000446382 1122 ntBASIC17.6■□□□□ 0.41
RETP07949 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RETP07949 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.6■□□□□ 0.41
RETP07949 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.6■□□□□ 0.41
RETP07949 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
RETP07949 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RETP07949 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.6■□□□□ 0.41
RETP07949 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RETP07949 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.6■□□□□ 0.41
RETP07949 AC004449.1-201ENST00000564240 433 ntBASIC17.6■□□□□ 0.41
RETP07949 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.6■□□□□ 0.41
RETP07949 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.6■□□□□ 0.41
RETP07949 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RETP07949 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RETP07949 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RETP07949 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RETP07949 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RETP07949 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RETP07949 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RETP07949 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RETP07949 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RETP07949 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RETP07949 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RETP07949 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RETP07949 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RETP07949 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RETP07949 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RETP07949 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.59■□□□□ 0.41
RETP07949 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RETP07949 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RETP07949 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RETP07949 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RETP07949 ESPNP-201ENST00000270691 2015 ntBASIC17.59■□□□□ 0.41
RETP07949 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.59■□□□□ 0.41
RETP07949 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.59■□□□□ 0.41
RETP07949 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.59■□□□□ 0.41
RETP07949 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.59■□□□□ 0.41
RETP07949 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.59■□□□□ 0.41
RETP07949 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RETP07949 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.59■□□□□ 0.41
RETP07949 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RETP07949 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.59■□□□□ 0.41
RETP07949 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
RETP07949 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.59■□□□□ 0.41
RETP07949 AC007967.3-201ENST00000434308 558 ntBASIC17.59■□□□□ 0.41
RETP07949 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.59■□□□□ 0.41
RETP07949 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.59■□□□□ 0.41
RETP07949 AC108073.2-201ENST00000464002 357 ntBASIC17.59■□□□□ 0.41
RETP07949 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RETP07949 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.59■□□□□ 0.41
RETP07949 AL031432.2-201ENST00000566714 459 ntBASIC17.59■□□□□ 0.41
RETP07949 AL928711.1-201ENST00000570165 459 ntBASIC17.59■□□□□ 0.41
RETP07949 AC138761.1-201ENST00000584393 385 ntBASIC17.59■□□□□ 0.41
RETP07949 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RETP07949 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RETP07949 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RETP07949 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
RETP07949 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RETP07949 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RETP07949 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RETP07949 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RETP07949 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RETP07949 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RETP07949 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.58■□□□□ 0.41
RETP07949 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RETP07949 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RETP07949 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.58■□□□□ 0.41
RETP07949 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RETP07949 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RETP07949 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.58■□□□□ 0.41
RETP07949 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RETP07949 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RETP07949 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RETP07949 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RETP07949 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
RETP07949 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RETP07949 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.58■□□□□ 0.4
RETP07949 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RETP07949 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RETP07949 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RETP07949 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.58■□□□□ 0.4
RETP07949 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.58■□□□□ 0.4
RETP07949 AC190387.1-201ENST00000551683 408 ntBASIC17.58■□□□□ 0.4
RETP07949 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.58■□□□□ 0.4
RETP07949 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms