Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
RAB5BP61020 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
RAB5BP61020 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.71□□□□□ -0.22
RAB5BP61020 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB5BP61020 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RAB5BP61020 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB5BP61020 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB5BP61020 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB5BP61020 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB5BP61020 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB5BP61020 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB5BP61020 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB5BP61020 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RAB5BP61020 PTENP1-202ENST00000532280 3996 ntBASIC13.7□□□□□ -0.22
RAB5BP61020 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB5BP61020 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB5BP61020 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB5BP61020 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RAB5BP61020 ST20-AS1-201ENST00000560255 4223 ntBASIC13.7□□□□□ -0.22
RAB5BP61020 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB5BP61020 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.7□□□□□ -0.22
RAB5BP61020 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.7□□□□□ -0.22
RAB5BP61020 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB5BP61020 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB5BP61020 KRT18P20-201ENST00000548986 1279 ntBASIC13.7□□□□□ -0.22
RAB5BP61020 SRR-208ENST00000576848 588 ntTSL 4 BASIC13.7□□□□□ -0.22
RAB5BP61020 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
RAB5BP61020 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB5BP61020 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB5BP61020 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB5BP61020 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB5BP61020 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB5BP61020 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB5BP61020 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RAB5BP61020 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB5BP61020 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB5BP61020 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB5BP61020 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RAB5BP61020 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB5BP61020 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB5BP61020 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB5BP61020 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.7□□□□□ -0.22
RAB5BP61020 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB5BP61020 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.7□□□□□ -0.22
RAB5BP61020 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5BP61020 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RAB5BP61020 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RAB5BP61020 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB5BP61020 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB5BP61020 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5BP61020 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5BP61020 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5BP61020 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5BP61020 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.69□□□□□ -0.22
RAB5BP61020 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RAB5BP61020 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5BP61020 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RAB5BP61020 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5BP61020 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5BP61020 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5BP61020 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5BP61020 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.69□□□□□ -0.22
RAB5BP61020 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB5BP61020 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5BP61020 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RAB5BP61020 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5BP61020 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5BP61020 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB5BP61020 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB5BP61020 AL512631.2-201ENST00000604634 923 ntBASIC13.69□□□□□ -0.22
RAB5BP61020 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RAB5BP61020 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5BP61020 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5BP61020 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RAB5BP61020 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RAB5BP61020 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RAB5BP61020 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5BP61020 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5BP61020 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RAB5BP61020 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5BP61020 AC073347.1-201ENST00000421633 2643 ntBASIC13.69□□□□□ -0.22
RAB5BP61020 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.69□□□□□ -0.22
RAB5BP61020 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5BP61020 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB5BP61020 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RAB5BP61020 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB5BP61020 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB5BP61020 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5BP61020 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5BP61020 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5BP61020 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5BP61020 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB5BP61020 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC13.68□□□□□ -0.22
RAB5BP61020 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5BP61020 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RAB5BP61020 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5BP61020 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5BP61020 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5BP61020 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5BP61020 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms