RNA–Protein interactions for RNA: ENST00000548986.1

KRT18P20-201, Transcript of keratin 18 pseudogene 20, humanhuman

BASIC

Gene KRT18P20, Length 1,279 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P20-201ENST00000548986 NISCHQ9Y2I1 1504 aa50.84■■■■■ 5.73
KRT18P20-201ENST00000548986 CCDC180Q9P1Z9 1646 aa45.23■■■■■ 4.83
KRT18P20-201ENST00000548986 ABCC9O60706 1549 aa43.88■■■■■ 4.61
KRT18P20-201ENST00000548986 NACADO15069 1562 aa42.48■■■■■ 4.39
KRT18P20-201ENST00000548986 RB1CC1Q8TDY2 1594 aa42.45■■■■■ 4.39
KRT18P20-201ENST00000548986 ZCCHC6Q5VYS8 1495 aaKnown RBP42.37■■■■■ 4.37
KRT18P20-201ENST00000548986 MYO15BQ96JP2 1530 aa42.35■■■■■ 4.37
KRT18P20-201ENST00000548986 DCAF8L2P0C7V8 631 aa42.27■■■■■ 4.36
KRT18P20-201ENST00000548986 DCAF1Q9Y4B6 1507 aa42.19■■■■■ 4.34
KRT18P20-201ENST00000548986 UNC13AQ9UPW8 1703 aa41.47■■■■■ 4.23
KRT18P20-201ENST00000548986 SCRIBQ14160 1630 aa41.09■■■■■ 4.17
KRT18P20-201ENST00000548986 BICRAQ9NZM4 1560 aa41.08■■■■■ 4.17
KRT18P20-201ENST00000548986 PABPN1Q86U42 306 aaKnown RBP eCLIP40.98■■■■■ 4.15
KRT18P20-201ENST00000548986 SHROOM4Q9ULL8 1493 aa40.83■■■■■ 4.13
KRT18P20-201ENST00000548986 DNAJC5BQ9UF47 199 aa40.08■■■■■ 4.01
KRT18P20-201ENST00000548986 EIF4G1Q04637 1599 aaKnown RBP40■■■■□ 3.99
KRT18P20-201ENST00000548986 CC2D2AQ9P2K1 1620 aa39.79■■■■□ 3.96
KRT18P20-201ENST00000548986 CECR2Q9BXF3 1484 aa39.49■■■■□ 3.91
KRT18P20-201ENST00000548986 BAZ1AQ9NRL2 1556 aaPredicted RBP39.43■■■■□ 3.9
KRT18P20-201ENST00000548986 SMARCA4P51532 1647 aa39.41■■■■□ 3.9
KRT18P20-201ENST00000548986 SMARCA2P51531 1590 aa39.17■■■■□ 3.86
KRT18P20-201ENST00000548986 NCAPD3P42695 1498 aa39.16■■■■□ 3.86
KRT18P20-201ENST00000548986 ATAD2BQ9ULI0 1458 aa39.14■■■■□ 3.86
KRT18P20-201ENST00000548986 MROH2BQ7Z745 1585 aa39.12■■■■□ 3.85
KRT18P20-201ENST00000548986 PEG3Q9GZU2 1588 aa39.1■■■■□ 3.85
KRT18P20-201ENST00000548986 HMGXB3Q12766 1538 aa38.99■■■■□ 3.83
KRT18P20-201ENST00000548986 BAZ1BQ9UIG0 1483 aaKnown RBP38.83■■■■□ 3.81
KRT18P20-201ENST00000548986 RSF1Q96T23 1441 aaPredicted RBP38.75■■■■□ 3.79
KRT18P20-201ENST00000548986 WIZO95785 1651 aa38.71■■■■□ 3.79
KRT18P20-201ENST00000548986 TOP2AP11388 1531 aaKnown RBP38.36■■■■□ 3.73
KRT18P20-201ENST00000548986 LAMC3Q9Y6N6 1575 aa38.12■■■■□ 3.69
KRT18P20-201ENST00000548986 NESP48681 1621 aa38■■■■□ 3.67
KRT18P20-201ENST00000548986 CADPSQ9ULU8 1353 aa37.99■■■■□ 3.67
KRT18P20-201ENST00000548986 CCDC88BA6NC98 1476 aa37.88■■■■□ 3.65
KRT18P20-201ENST00000548986 ERCC6Q03468 1493 aa37.86■■■■□ 3.65
KRT18P20-201ENST00000548986 PDS5BQ9NTI5 1447 aa37.84■■■■□ 3.65
KRT18P20-201ENST00000548986 CFTRP13569 1480 aa37.81■■■■□ 3.64
KRT18P20-201ENST00000548986 SUPT5HO00267 1087 aaKnown RBP37.79■■■■□ 3.64
KRT18P20-201ENST00000548986 KIF21AQ7Z4S6 1674 aa37.66■■■■□ 3.62
KRT18P20-201ENST00000548986 PRDM2Q13029 1718 aa37.64■■■■□ 3.62
KRT18P20-201ENST00000548986 FANCD2Q9BXW9 1451 aa37.52■■■■□ 3.6
KRT18P20-201ENST00000548986 CUX2O14529 1486 aa37.5■■■■□ 3.59
KRT18P20-201ENST00000548986 THOC2Q8NI27 1593 aaKnown RBP37.49■■■■□ 3.59
KRT18P20-201ENST00000548986 CEP164Q9UPV0 1460 aa37.47■■■■□ 3.59
KRT18P20-201ENST00000548986 MRC2Q9UBG0 1479 aa37.39■■■■□ 3.58
KRT18P20-201ENST00000548986 WDR62O43379 1518 aa37.27■■■■□ 3.56
KRT18P20-201ENST00000548986 URB2Q14146 1524 aaKnown RBP37.1■■■■□ 3.53
KRT18P20-201ENST00000548986 ABCC8Q09428 1581 aa37.09■■■■□ 3.53
KRT18P20-201ENST00000548986 DNMBPQ6XZF7 1577 aa36.95■■■■□ 3.51
KRT18P20-201ENST00000548986 TOPBP1Q92547 1522 aa36.94■■■■□ 3.5
KRT18P20-201ENST00000548986 IFT140Q96RY7 1462 aa36.71■■■■□ 3.47
KRT18P20-201ENST00000548986 CUX1P39880 1505 aa36.69■■■■□ 3.46
KRT18P20-201ENST00000548986 POLA1P09884 1462 aaPredicted RBP36.62■■■■□ 3.45
KRT18P20-201ENST00000548986 WRNQ14191 1432 aaPredicted RBP eCLIP36.55■■■■□ 3.44
KRT18P20-201ENST00000548986 TARBP1Q13395 1621 aaKnown RBP36.55■■■■□ 3.44
KRT18P20-201ENST00000548986 FGD5Q6ZNL6 1462 aa36.55■■■■□ 3.44
KRT18P20-201ENST00000548986 BIVM-ERCC5R4GMW8 1640 aa36.51■■■■□ 3.43
KRT18P20-201ENST00000548986 SOGA1O94964 1423 aa36.51■■■■□ 3.43
KRT18P20-201ENST00000548986 TOP2BQ02880 1626 aa36.5■■■■□ 3.43
KRT18P20-201ENST00000548986 WDR97A6NE52 1622 aa36.41■■■■□ 3.42
KRT18P20-201ENST00000548986 ZNF608Q9ULD9 1512 aaPredicted RBP36.41■■■■□ 3.42
KRT18P20-201ENST00000548986 SYNJ1O43426 1573 aa36.4■■■■□ 3.42
KRT18P20-201ENST00000548986 RAD54L2Q9Y4B4 1467 aa36.4■■■■□ 3.42
KRT18P20-201ENST00000548986 EIF4G3O43432 1585 aaKnown RBP36.34■■■■□ 3.41
KRT18P20-201ENST00000548986 ABCA10Q8WWZ4 1543 aa36.27■■■■□ 3.4
KRT18P20-201ENST00000548986 AQRO60306 1485 aaKnown RBP eCLIP36.24■■■■□ 3.39
KRT18P20-201ENST00000548986 TDRD9Q8NDG6 1382 aaKnown RBP36.2■■■■□ 3.39
KRT18P20-201ENST00000548986 DNAJC5Q9H3Z4 198 aa36.11■■■■□ 3.37
KRT18P20-201ENST00000548986 ABCA5Q8WWZ7 1642 aa36.09■■■■□ 3.37
KRT18P20-201ENST00000548986 GAPVD1Q14C86 1478 aa36.09■■■■□ 3.37
KRT18P20-201ENST00000548986 GRIN2BQ13224 1484 aa36.08■■■■□ 3.37
KRT18P20-201ENST00000548986 PBRM1Q86U86 1689 aa36.03■■■■□ 3.36
KRT18P20-201ENST00000548986 MAGI1Q96QZ7 1491 aaPredicted RBP35.99■■■■□ 3.35
KRT18P20-201ENST00000548986 OSCARQ8IYS5 282 aa35.96■■■■□ 3.35
KRT18P20-201ENST00000548986 SNAPC4Q5SXM2 1469 aa35.92■■■■□ 3.34
KRT18P20-201ENST00000548986 CHD1O14646 1710 aa35.88■■■■□ 3.33
KRT18P20-201ENST00000548986 ERICH3Q5RHP9 1530 aa35.88■■■■□ 3.33
KRT18P20-201ENST00000548986 SYNJ2O15056 1496 aa35.82■■■■□ 3.32
KRT18P20-201ENST00000548986 KIF27Q86VH2 1401 aa35.81■■■■□ 3.32
KRT18P20-201ENST00000548986 TRIM41Q8WV44 630 aa35.79■■■■□ 3.32
KRT18P20-201ENST00000548986 CHMP7Q8WUX9 453 aaPredicted RBP35.78■■■■□ 3.32
KRT18P20-201ENST00000548986 FBLN2P98095 1184 aa35.76■■■■□ 3.32
KRT18P20-201ENST00000548986 ADAMTS12P58397 1594 aa35.71■■■■□ 3.31
KRT18P20-201ENST00000548986 FHAD1B1AJZ9 1412 aa35.7■■■■□ 3.31
KRT18P20-201ENST00000548986 IGF1RP08069 1367 aa35.62■■■■□ 3.29
KRT18P20-201ENST00000548986 CUL7Q14999 1698 aa35.59■■■■□ 3.29
KRT18P20-201ENST00000548986 GRIN2AQ12879 1464 aa35.59■■■■□ 3.29
KRT18P20-201ENST00000548986 CLASP1Q7Z460 1538 aa35.49■■■■□ 3.27
KRT18P20-201ENST00000548986 NUP160Q12769 1436 aa35.45■■■■□ 3.27
KRT18P20-201ENST00000548986 CHIC1Q5VXU3 224 aa35.43■■■■□ 3.26
KRT18P20-201ENST00000548986 CARMIL1Q5VZK9 1371 aa35.41■■■■□ 3.26
KRT18P20-201ENST00000548986 RUSC2Q8N2Y8 1516 aa35.4■■■■□ 3.26
KRT18P20-201ENST00000548986 CEP170Q5SW79 1584 aa35.37■■■■□ 3.25
KRT18P20-201ENST00000548986 RIMBP3CA6NJZ7 1639 aa35.31■■■■□ 3.24
KRT18P20-201ENST00000548986 RIMBP3BA6NNM3 1639 aa35.31■■■■□ 3.24
KRT18P20-201ENST00000548986 RIMBP3Q9UFD9 1639 aa35.31■■■■□ 3.24
KRT18P20-201ENST00000548986 ARHGEF11O15085 1522 aa35.31■■■■□ 3.24
KRT18P20-201ENST00000548986 EEA1Q15075 1411 aa35.31■■■■□ 3.24
KRT18P20-201ENST00000548986 RAPGEF2Q9Y4G8 1499 aa35.24■■■■□ 3.23
KRT18P20-201ENST00000548986 SHROOM2Q13796 1616 aa35.19■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms