Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 AL109659.2-201ENST00000606809 1674 ntBASIC13.63□□□□□ -0.23
ERVFC1-1P60608 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 AC092368.3-202ENST00000574180 1591 ntBASIC13.63□□□□□ -0.23
ERVFC1-1P60608 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 AC093827.2-201ENST00000512654 315 ntBASIC13.63□□□□□ -0.23
ERVFC1-1P60608 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 AP003097.1-201ENST00000530657 1135 ntBASIC13.63□□□□□ -0.23
ERVFC1-1P60608 REXO2-208ENST00000539754 791 ntTSL 2 BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 AC060766.5-201ENST00000590539 871 ntBASIC13.63□□□□□ -0.23
ERVFC1-1P60608 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 AC120498.8-201ENST00000614275 531 ntBASIC13.63□□□□□ -0.23
ERVFC1-1P60608 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 AC026691.1-201ENST00000602502 2017 ntBASIC13.63□□□□□ -0.23
ERVFC1-1P60608 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ERVFC1-1P60608 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 AC026366.1-201ENST00000488803 879 ntBASIC13.62□□□□□ -0.23
ERVFC1-1P60608 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 AC008687.6-201ENST00000596318 630 ntBASIC13.62□□□□□ -0.23
ERVFC1-1P60608 HLA-B-256ENST00000639848 1089 ntBASIC13.62□□□□□ -0.23
ERVFC1-1P60608 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.62□□□□□ -0.23
ERVFC1-1P60608 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms