RNA–Protein interactions for RNA: ENST00000379051.5

SEC61A2-206, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 3 BASIC

Gene SEC61A2, Length 707 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-206ENST00000379051 NISCHQ9Y2I1 1504 aa49.69■■■■■ 5.54
SEC61A2-206ENST00000379051 ABCC9O60706 1549 aa44.76■■■■■ 4.76
SEC61A2-206ENST00000379051 CCDC180Q9P1Z9 1646 aa44.67■■■■■ 4.74
SEC61A2-206ENST00000379051 RB1CC1Q8TDY2 1594 aa42.56■■■■■ 4.4
SEC61A2-206ENST00000379051 NACADO15069 1562 aa42.21■■■■■ 4.35
SEC61A2-206ENST00000379051 DCAF8L2P0C7V8 631 aa42.14■■■■■ 4.34
SEC61A2-206ENST00000379051 DNAJC5BQ9UF47 199 aa41.93■■■■■ 4.3
SEC61A2-206ENST00000379051 PABPN1Q86U42 306 aaKnown RBP eCLIP41.65■■■■■ 4.26
SEC61A2-206ENST00000379051 UNC13AQ9UPW8 1703 aa41.64■■■■■ 4.26
SEC61A2-206ENST00000379051 MYO15BQ96JP2 1530 aa41.52■■■■■ 4.24
SEC61A2-206ENST00000379051 BICRAQ9NZM4 1560 aa41.25■■■■■ 4.19
SEC61A2-206ENST00000379051 ZCCHC6Q5VYS8 1495 aaKnown RBP41.16■■■■■ 4.18
SEC61A2-206ENST00000379051 DCAF1Q9Y4B6 1507 aa40.98■■■■■ 4.15
SEC61A2-206ENST00000379051 SCRIBQ14160 1630 aa40.76■■■■■ 4.12
SEC61A2-206ENST00000379051 SHROOM4Q9ULL8 1493 aa40.67■■■■■ 4.1
SEC61A2-206ENST00000379051 CC2D2AQ9P2K1 1620 aa40.42■■■■■ 4.06
SEC61A2-206ENST00000379051 CECR2Q9BXF3 1484 aa40.3■■■■■ 4.04
SEC61A2-206ENST00000379051 EIF4G1Q04637 1599 aaKnown RBP40.3■■■■■ 4.04
SEC61A2-206ENST00000379051 NCAPD3P42695 1498 aa38.92■■■■□ 3.82
SEC61A2-206ENST00000379051 SMARCA4P51532 1647 aa38.82■■■■□ 3.81
SEC61A2-206ENST00000379051 ATAD2BQ9ULI0 1458 aa38.82■■■■□ 3.81
SEC61A2-206ENST00000379051 SMARCA2P51531 1590 aa38.76■■■■□ 3.8
SEC61A2-206ENST00000379051 ERCC6Q03468 1493 aa38.7■■■■□ 3.79
SEC61A2-206ENST00000379051 HMGXB3Q12766 1538 aa38.67■■■■□ 3.78
SEC61A2-206ENST00000379051 BAZ1AQ9NRL2 1556 aaPredicted RBP38.61■■■■□ 3.77
SEC61A2-206ENST00000379051 DNAJC5Q9H3Z4 198 aa38.57■■■■□ 3.76
SEC61A2-206ENST00000379051 CUX2O14529 1486 aa38.56■■■■□ 3.76
SEC61A2-206ENST00000379051 BAZ1BQ9UIG0 1483 aaKnown RBP38.52■■■■□ 3.76
SEC61A2-206ENST00000379051 NESP48681 1621 aa38.41■■■■□ 3.74
SEC61A2-206ENST00000379051 PEG3Q9GZU2 1588 aa38.36■■■■□ 3.73
SEC61A2-206ENST00000379051 MROH2BQ7Z745 1585 aa38.3■■■■□ 3.72
SEC61A2-206ENST00000379051 LAMC3Q9Y6N6 1575 aa38.13■■■■□ 3.69
SEC61A2-206ENST00000379051 THOC2Q8NI27 1593 aaKnown RBP38.03■■■■□ 3.68
SEC61A2-206ENST00000379051 KIF21AQ7Z4S6 1674 aa37.98■■■■□ 3.67
SEC61A2-206ENST00000379051 PDS5BQ9NTI5 1447 aa37.91■■■■□ 3.66
SEC61A2-206ENST00000379051 WIZO95785 1651 aa37.9■■■■□ 3.66
SEC61A2-206ENST00000379051 CADPSQ9ULU8 1353 aa37.77■■■■□ 3.64
SEC61A2-206ENST00000379051 MRC2Q9UBG0 1479 aa37.59■■■■□ 3.61
SEC61A2-206ENST00000379051 WDR62O43379 1518 aa37.47■■■■□ 3.59
SEC61A2-206ENST00000379051 CEP164Q9UPV0 1460 aa37.45■■■■□ 3.59
SEC61A2-206ENST00000379051 RSF1Q96T23 1441 aaPredicted RBP37.45■■■■□ 3.59
SEC61A2-206ENST00000379051 FANCD2Q9BXW9 1451 aa37.39■■■■□ 3.58
SEC61A2-206ENST00000379051 TOP2AP11388 1531 aaKnown RBP37.38■■■■□ 3.57
SEC61A2-206ENST00000379051 CFTRP13569 1480 aa37.31■■■■□ 3.56
SEC61A2-206ENST00000379051 PRDM2Q13029 1718 aa37.07■■■■□ 3.52
SEC61A2-206ENST00000379051 URB2Q14146 1524 aaKnown RBP37.05■■■■□ 3.52
SEC61A2-206ENST00000379051 TRIM41Q8WV44 630 aa37.01■■■■□ 3.52
SEC61A2-206ENST00000379051 CCDC88BA6NC98 1476 aa36.94■■■■□ 3.5
SEC61A2-206ENST00000379051 OSCARQ8IYS5 282 aa36.81■■■■□ 3.48
SEC61A2-206ENST00000379051 IFT140Q96RY7 1462 aa36.68■■■■□ 3.46
SEC61A2-206ENST00000379051 TOPBP1Q92547 1522 aa36.65■■■■□ 3.46
SEC61A2-206ENST00000379051 ZNF608Q9ULD9 1512 aaPredicted RBP36.62■■■■□ 3.45
SEC61A2-206ENST00000379051 ABCC8Q09428 1581 aa36.57■■■■□ 3.44
SEC61A2-206ENST00000379051 DNMBPQ6XZF7 1577 aa36.53■■■■□ 3.44
SEC61A2-206ENST00000379051 EIF4G3O43432 1585 aaKnown RBP36.47■■■■□ 3.43
SEC61A2-206ENST00000379051 RIMBP3CA6NJZ7 1639 aa36.37■■■■□ 3.41
SEC61A2-206ENST00000379051 RIMBP3BA6NNM3 1639 aa36.37■■■■□ 3.41
SEC61A2-206ENST00000379051 RIMBP3Q9UFD9 1639 aa36.37■■■■□ 3.41
SEC61A2-206ENST00000379051 TARBP1Q13395 1621 aaKnown RBP36.33■■■■□ 3.41
SEC61A2-206ENST00000379051 AQRO60306 1485 aaKnown RBP eCLIP36.29■■■■□ 3.4
SEC61A2-206ENST00000379051 POLA1P09884 1462 aaPredicted RBP36.27■■■■□ 3.4
SEC61A2-206ENST00000379051 CHD1O14646 1710 aa36.25■■■■□ 3.39
SEC61A2-206ENST00000379051 ARHGEF11O15085 1522 aa36.22■■■■□ 3.39
SEC61A2-206ENST00000379051 FBLN2P98095 1184 aa36.17■■■■□ 3.38
SEC61A2-206ENST00000379051 RAD54L2Q9Y4B4 1467 aa36.17■■■■□ 3.38
SEC61A2-206ENST00000379051 SOGA1O94964 1423 aa36.12■■■■□ 3.37
SEC61A2-206ENST00000379051 FGD5Q6ZNL6 1462 aa36.06■■■■□ 3.36
SEC61A2-206ENST00000379051 TDRD9Q8NDG6 1382 aaKnown RBP36.06■■■■□ 3.36
SEC61A2-206ENST00000379051 CUX1P39880 1505 aa36■■■■□ 3.35
SEC61A2-206ENST00000379051 CYB5RLQ6IPT4 315 aa35.99■■■■□ 3.35
SEC61A2-206ENST00000379051 WDR97A6NE52 1622 aa35.96■■■■□ 3.35
SEC61A2-206ENST00000379051 SNAPC4Q5SXM2 1469 aa35.94■■■■□ 3.34
SEC61A2-206ENST00000379051 SUPT5HO00267 1087 aaKnown RBP35.89■■■■□ 3.34
SEC61A2-206ENST00000379051 CHMP7Q8WUX9 453 aaPredicted RBP35.84■■■■□ 3.33
SEC61A2-206ENST00000379051 ARAP1Q96P48 1450 aa35.84■■■■□ 3.33
SEC61A2-206ENST00000379051 GRIN2BQ13224 1484 aa35.81■■■■□ 3.32
SEC61A2-206ENST00000379051 MAGI1Q96QZ7 1491 aaPredicted RBP35.81■■■■□ 3.32
SEC61A2-206ENST00000379051 SYNJ1O43426 1573 aa35.77■■■■□ 3.32
SEC61A2-206ENST00000379051 PBRM1Q86U86 1689 aa35.76■■■■□ 3.32
SEC61A2-206ENST00000379051 CLASP1Q7Z460 1538 aa35.73■■■■□ 3.31
SEC61A2-206ENST00000379051 SYNJ2O15056 1496 aa35.7■■■■□ 3.31
SEC61A2-206ENST00000379051 GAPVD1Q14C86 1478 aa35.69■■■■□ 3.3
SEC61A2-206ENST00000379051 TRHP20396 242 aaPredicted RBP35.69■■■■□ 3.3
SEC61A2-206ENST00000379051 ABCA10Q8WWZ4 1543 aa35.61■■■■□ 3.29
SEC61A2-206ENST00000379051 ABCA5Q8WWZ7 1642 aa35.59■■■■□ 3.29
SEC61A2-206ENST00000379051 WRNQ14191 1432 aaPredicted RBP eCLIP35.49■■■■□ 3.27
SEC61A2-206ENST00000379051 BIVM-ERCC5R4GMW8 1640 aa35.43■■■■□ 3.26
SEC61A2-206ENST00000379051 TOP2BQ02880 1626 aa35.42■■■■□ 3.26
SEC61A2-206ENST00000379051 GRIN2AQ12879 1464 aa35.35■■■■□ 3.25
SEC61A2-206ENST00000379051 ADAMTS12P58397 1594 aa35.35■■■■□ 3.25
SEC61A2-206ENST00000379051 CEP170Q5SW79 1584 aa35.24■■■■□ 3.23
SEC61A2-206ENST00000379051 FHAD1B1AJZ9 1412 aa35.22■■■■□ 3.23
SEC61A2-206ENST00000379051 ERCC6L2Q5T890 1561 aa35.2■■■■□ 3.23
SEC61A2-206ENST00000379051 NUP160Q12769 1436 aa35.19■■■■□ 3.22
SEC61A2-206ENST00000379051 ERICH3Q5RHP9 1530 aa35.18■■■■□ 3.22
SEC61A2-206ENST00000379051 SHROOM2Q13796 1616 aa35.07■■■■□ 3.21
SEC61A2-206ENST00000379051 PRG4Q92954 1404 aaPredicted RBP34.92■■■■□ 3.18
SEC61A2-206ENST00000379051 JPH4Q96JJ6 628 aa34.87■■■■□ 3.17
SEC61A2-206ENST00000379051 RUSC2Q8N2Y8 1516 aa34.85■■■■□ 3.17
SEC61A2-206ENST00000379051 KIF27Q86VH2 1401 aa34.73■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms