RNA–Protein interactions for RNA: ENST00000303927.3

CAVIN3-201, Transcript of caveolae associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAVIN3, Length 1,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-201ENST00000303927 NISCHQ9Y2I1 1504 aa49.11■■■■■ 5.45
CAVIN3-201ENST00000303927 CCDC180Q9P1Z9 1646 aa44.11■■■■■ 4.65
CAVIN3-201ENST00000303927 ABCC9O60706 1549 aa44.02■■■■■ 4.64
CAVIN3-201ENST00000303927 RB1CC1Q8TDY2 1594 aa41.95■■■■■ 4.31
CAVIN3-201ENST00000303927 NACADO15069 1562 aa41.66■■■■■ 4.26
CAVIN3-201ENST00000303927 DCAF8L2P0C7V8 631 aa41.36■■■■■ 4.21
CAVIN3-201ENST00000303927 DNAJC5BQ9UF47 199 aa41.19■■■■■ 4.18
CAVIN3-201ENST00000303927 MYO15BQ96JP2 1530 aa41.08■■■■■ 4.17
CAVIN3-201ENST00000303927 UNC13AQ9UPW8 1703 aa41.03■■■■■ 4.16
CAVIN3-201ENST00000303927 PABPN1Q86U42 306 aaKnown RBP eCLIP40.94■■■■■ 4.14
CAVIN3-201ENST00000303927 ZCCHC6Q5VYS8 1495 aaKnown RBP40.73■■■■■ 4.11
CAVIN3-201ENST00000303927 BICRAQ9NZM4 1560 aa40.72■■■■■ 4.11
CAVIN3-201ENST00000303927 DCAF1Q9Y4B6 1507 aa40.58■■■■■ 4.09
CAVIN3-201ENST00000303927 SCRIBQ14160 1630 aa40.19■■■■■ 4.02
CAVIN3-201ENST00000303927 SHROOM4Q9ULL8 1493 aa40.19■■■■■ 4.02
CAVIN3-201ENST00000303927 CC2D2AQ9P2K1 1620 aa39.79■■■■□ 3.96
CAVIN3-201ENST00000303927 EIF4G1Q04637 1599 aaKnown RBP39.72■■■■□ 3.95
CAVIN3-201ENST00000303927 CECR2Q9BXF3 1484 aa39.65■■■■□ 3.94
CAVIN3-201ENST00000303927 NCAPD3P42695 1498 aa38.42■■■■□ 3.74
CAVIN3-201ENST00000303927 SMARCA4P51532 1647 aa38.34■■■■□ 3.73
CAVIN3-201ENST00000303927 ATAD2BQ9ULI0 1458 aa38.32■■■■□ 3.72
CAVIN3-201ENST00000303927 SMARCA2P51531 1590 aa38.24■■■■□ 3.71
CAVIN3-201ENST00000303927 HMGXB3Q12766 1538 aa38.19■■■■□ 3.7
CAVIN3-201ENST00000303927 BAZ1AQ9NRL2 1556 aaPredicted RBP38.14■■■■□ 3.7
CAVIN3-201ENST00000303927 ERCC6Q03468 1493 aa38.03■■■■□ 3.68
CAVIN3-201ENST00000303927 BAZ1BQ9UIG0 1483 aaKnown RBP37.97■■■■□ 3.67
CAVIN3-201ENST00000303927 PEG3Q9GZU2 1588 aa37.96■■■■□ 3.67
CAVIN3-201ENST00000303927 CUX2O14529 1486 aa37.94■■■■□ 3.66
CAVIN3-201ENST00000303927 MROH2BQ7Z745 1585 aa37.85■■■■□ 3.65
CAVIN3-201ENST00000303927 NESP48681 1621 aa37.83■■■■□ 3.65
CAVIN3-201ENST00000303927 DNAJC5Q9H3Z4 198 aa37.8■■■■□ 3.64
CAVIN3-201ENST00000303927 LAMC3Q9Y6N6 1575 aa37.59■■■■□ 3.61
CAVIN3-201ENST00000303927 THOC2Q8NI27 1593 aaKnown RBP37.49■■■■□ 3.59
CAVIN3-201ENST00000303927 WIZO95785 1651 aa37.41■■■■□ 3.58
CAVIN3-201ENST00000303927 KIF21AQ7Z4S6 1674 aa37.4■■■■□ 3.58
CAVIN3-201ENST00000303927 PDS5BQ9NTI5 1447 aa37.34■■■■□ 3.57
CAVIN3-201ENST00000303927 CADPSQ9ULU8 1353 aa37.25■■■■□ 3.55
CAVIN3-201ENST00000303927 RSF1Q96T23 1441 aaPredicted RBP37.05■■■■□ 3.52
CAVIN3-201ENST00000303927 MRC2Q9UBG0 1479 aa37.04■■■■□ 3.52
CAVIN3-201ENST00000303927 WDR62O43379 1518 aa36.97■■■■□ 3.51
CAVIN3-201ENST00000303927 TOP2AP11388 1531 aaKnown RBP36.95■■■■□ 3.51
CAVIN3-201ENST00000303927 CEP164Q9UPV0 1460 aa36.91■■■■□ 3.5
CAVIN3-201ENST00000303927 CFTRP13569 1480 aa36.86■■■■□ 3.49
CAVIN3-201ENST00000303927 FANCD2Q9BXW9 1451 aa36.86■■■■□ 3.49
CAVIN3-201ENST00000303927 PRDM2Q13029 1718 aa36.56■■■■□ 3.44
CAVIN3-201ENST00000303927 URB2Q14146 1524 aaKnown RBP36.56■■■■□ 3.44
CAVIN3-201ENST00000303927 CCDC88BA6NC98 1476 aa36.5■■■■□ 3.43
CAVIN3-201ENST00000303927 TRIM41Q8WV44 630 aa36.18■■■■□ 3.38
CAVIN3-201ENST00000303927 TOPBP1Q92547 1522 aa36.17■■■■□ 3.38
CAVIN3-201ENST00000303927 IFT140Q96RY7 1462 aa36.16■■■■□ 3.38
CAVIN3-201ENST00000303927 OSCARQ8IYS5 282 aa36.14■■■■□ 3.38
CAVIN3-201ENST00000303927 ZNF608Q9ULD9 1512 aaPredicted RBP36.09■■■■□ 3.37
CAVIN3-201ENST00000303927 ABCC8Q09428 1581 aa36.08■■■■□ 3.37
CAVIN3-201ENST00000303927 DNMBPQ6XZF7 1577 aa36.06■■■■□ 3.36
CAVIN3-201ENST00000303927 SUPT5HO00267 1087 aaKnown RBP36■■■■□ 3.35
CAVIN3-201ENST00000303927 EIF4G3O43432 1585 aaKnown RBP35.95■■■■□ 3.35
CAVIN3-201ENST00000303927 TARBP1Q13395 1621 aaKnown RBP35.86■■■■□ 3.33
CAVIN3-201ENST00000303927 POLA1P09884 1462 aaPredicted RBP35.8■■■■□ 3.32
CAVIN3-201ENST00000303927 RIMBP3CA6NJZ7 1639 aa35.75■■■■□ 3.31
CAVIN3-201ENST00000303927 RIMBP3BA6NNM3 1639 aa35.75■■■■□ 3.31
CAVIN3-201ENST00000303927 RIMBP3Q9UFD9 1639 aa35.75■■■■□ 3.31
CAVIN3-201ENST00000303927 AQRO60306 1485 aaKnown RBP eCLIP35.75■■■■□ 3.31
CAVIN3-201ENST00000303927 CHD1O14646 1710 aa35.67■■■■□ 3.3
CAVIN3-201ENST00000303927 RAD54L2Q9Y4B4 1467 aa35.66■■■■□ 3.3
CAVIN3-201ENST00000303927 ARHGEF11O15085 1522 aa35.63■■■■□ 3.29
CAVIN3-201ENST00000303927 SOGA1O94964 1423 aa35.61■■■■□ 3.29
CAVIN3-201ENST00000303927 FGD5Q6ZNL6 1462 aa35.59■■■■□ 3.29
CAVIN3-201ENST00000303927 CUX1P39880 1505 aa35.57■■■■□ 3.28
CAVIN3-201ENST00000303927 TDRD9Q8NDG6 1382 aaKnown RBP35.53■■■■□ 3.28
CAVIN3-201ENST00000303927 WDR97A6NE52 1622 aa35.52■■■■□ 3.28
CAVIN3-201ENST00000303927 FBLN2P98095 1184 aa35.49■■■■□ 3.27
CAVIN3-201ENST00000303927 SNAPC4Q5SXM2 1469 aa35.42■■■■□ 3.26
CAVIN3-201ENST00000303927 MAGI1Q96QZ7 1491 aaPredicted RBP35.33■■■■□ 3.25
CAVIN3-201ENST00000303927 GRIN2BQ13224 1484 aa35.32■■■■□ 3.24
CAVIN3-201ENST00000303927 CYB5RLQ6IPT4 315 aa35.3■■■■□ 3.24
CAVIN3-201ENST00000303927 ARAP1Q96P48 1450 aa35.29■■■■□ 3.24
CAVIN3-201ENST00000303927 PBRM1Q86U86 1689 aa35.25■■■■□ 3.23
CAVIN3-201ENST00000303927 CLASP1Q7Z460 1538 aa35.25■■■■□ 3.23
CAVIN3-201ENST00000303927 SYNJ1O43426 1573 aa35.23■■■■□ 3.23
CAVIN3-201ENST00000303927 CHMP7Q8WUX9 453 aaPredicted RBP35.23■■■■□ 3.23
CAVIN3-201ENST00000303927 SYNJ2O15056 1496 aa35.21■■■■□ 3.23
CAVIN3-201ENST00000303927 GAPVD1Q14C86 1478 aa35.19■■■■□ 3.22
CAVIN3-201ENST00000303927 ABCA10Q8WWZ4 1543 aa35.18■■■■□ 3.22
CAVIN3-201ENST00000303927 ABCA5Q8WWZ7 1642 aa35.17■■■■□ 3.22
CAVIN3-201ENST00000303927 BIVM-ERCC5R4GMW8 1640 aa35.04■■■■□ 3.2
CAVIN3-201ENST00000303927 WRNQ14191 1432 aaPredicted RBP eCLIP35.03■■■■□ 3.2
CAVIN3-201ENST00000303927 TOP2BQ02880 1626 aa35.02■■■■□ 3.2
CAVIN3-201ENST00000303927 TRHP20396 242 aaPredicted RBP34.91■■■■□ 3.18
CAVIN3-201ENST00000303927 ADAMTS12P58397 1594 aa34.9■■■■□ 3.18
CAVIN3-201ENST00000303927 GRIN2AQ12879 1464 aa34.88■■■■□ 3.17
CAVIN3-201ENST00000303927 CEP170Q5SW79 1584 aa34.78■■■■□ 3.16
CAVIN3-201ENST00000303927 FHAD1B1AJZ9 1412 aa34.75■■■■□ 3.15
CAVIN3-201ENST00000303927 ERICH3Q5RHP9 1530 aa34.75■■■■□ 3.15
CAVIN3-201ENST00000303927 NUP160Q12769 1436 aa34.74■■■■□ 3.15
CAVIN3-201ENST00000303927 ERCC6L2Q5T890 1561 aa34.69■■■■□ 3.14
CAVIN3-201ENST00000303927 SHROOM2Q13796 1616 aa34.63■■■■□ 3.13
CAVIN3-201ENST00000303927 RUSC2Q8N2Y8 1516 aa34.42■■■■□ 3.1
CAVIN3-201ENST00000303927 PRG4Q92954 1404 aaPredicted RBP34.4■■■■□ 3.1
CAVIN3-201ENST00000303927 JPH4Q96JJ6 628 aa34.33■■■■□ 3.09
CAVIN3-201ENST00000303927 KIF27Q86VH2 1401 aa34.3■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms