Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CCNL1Q9UK58 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CCNL1Q9UK58 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
CCNL1Q9UK58 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
CCNL1Q9UK58 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CCNL1Q9UK58 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CCNL1Q9UK58 KRT125P-201ENST00000546827 989 ntBASIC31.65■■■□□ 2.66
CCNL1Q9UK58 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CCNL1Q9UK58 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CCNL1Q9UK58 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CCNL1Q9UK58 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC31.65■■■□□ 2.66
CCNL1Q9UK58 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC31.64■■■□□ 2.66
CCNL1Q9UK58 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC31.64■■■□□ 2.66
CCNL1Q9UK58 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
CCNL1Q9UK58 MIR4787-201ENST00000607364 84 ntBASIC31.64■■■□□ 2.66
CCNL1Q9UK58 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
CCNL1Q9UK58 AL139393.2-201ENST00000608721 2025 ntBASIC31.64■■■□□ 2.66
CCNL1Q9UK58 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.64■■■□□ 2.66
CCNL1Q9UK58 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CCNL1Q9UK58 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CCNL1Q9UK58 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
CCNL1Q9UK58 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC31.63■■■□□ 2.65
CCNL1Q9UK58 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CCNL1Q9UK58 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.63■■■□□ 2.65
CCNL1Q9UK58 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.63■■■□□ 2.65
CCNL1Q9UK58 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.63■■■□□ 2.65
CCNL1Q9UK58 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CCNL1Q9UK58 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CCNL1Q9UK58 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
CCNL1Q9UK58 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CCNL1Q9UK58 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC31.62■■■□□ 2.65
CCNL1Q9UK58 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC31.62■■■□□ 2.65
CCNL1Q9UK58 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CCNL1Q9UK58 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCNL1Q9UK58 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCNL1Q9UK58 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCNL1Q9UK58 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CCNL1Q9UK58 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC31.61■■■□□ 2.65
CCNL1Q9UK58 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CCNL1Q9UK58 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
CCNL1Q9UK58 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC31.6■■■□□ 2.65
CCNL1Q9UK58 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC31.6■■■□□ 2.65
CCNL1Q9UK58 UNC93B8-201ENST00000511903 705 ntBASIC31.6■■■□□ 2.65
CCNL1Q9UK58 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
CCNL1Q9UK58 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
CCNL1Q9UK58 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CCNL1Q9UK58 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC31.59■■■□□ 2.65
CCNL1Q9UK58 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CCNL1Q9UK58 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CCNL1Q9UK58 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CCNL1Q9UK58 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
CCNL1Q9UK58 BX664725.1-201ENST00000438252 379 ntBASIC31.58■■■□□ 2.65
CCNL1Q9UK58 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CCNL1Q9UK58 MIR638-201ENST00000385237 100 ntBASIC31.57■■■□□ 2.64
CCNL1Q9UK58 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC31.57■■■□□ 2.64
CCNL1Q9UK58 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CCNL1Q9UK58 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
CCNL1Q9UK58 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CCNL1Q9UK58 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.56■■■□□ 2.64
CCNL1Q9UK58 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.56■■■□□ 2.64
CCNL1Q9UK58 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CCNL1Q9UK58 WHAMMP3-201ENST00000611636 1609 ntBASIC31.56■■■□□ 2.64
CCNL1Q9UK58 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CCNL1Q9UK58 KRT16P3-201ENST00000439127 1283 ntBASIC31.55■■■□□ 2.64
CCNL1Q9UK58 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC31.55■■■□□ 2.64
CCNL1Q9UK58 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC31.55■■■□□ 2.64
CCNL1Q9UK58 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CCNL1Q9UK58 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
CCNL1Q9UK58 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCNL1Q9UK58 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC31.54■■■□□ 2.64
CCNL1Q9UK58 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCNL1Q9UK58 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.53■■■□□ 2.64
CCNL1Q9UK58 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCNL1Q9UK58 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CCNL1Q9UK58 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CCNL1Q9UK58 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.51■■■□□ 2.64
CCNL1Q9UK58 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CCNL1Q9UK58 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CCNL1Q9UK58 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC31.51■■■□□ 2.63
CCNL1Q9UK58 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC31.51■■■□□ 2.63
CCNL1Q9UK58 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
CCNL1Q9UK58 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
CCNL1Q9UK58 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC31.5■■■□□ 2.63
CCNL1Q9UK58 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.5■■■□□ 2.63
CCNL1Q9UK58 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.48■■■□□ 2.63
CCNL1Q9UK58 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.48■■■□□ 2.63
CCNL1Q9UK58 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.48■■■□□ 2.63
CCNL1Q9UK58 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CCNL1Q9UK58 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CCNL1Q9UK58 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
CCNL1Q9UK58 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC31.47■■■□□ 2.63
CCNL1Q9UK58 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
CCNL1Q9UK58 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCNL1Q9UK58 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC31.46■■■□□ 2.63
CCNL1Q9UK58 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCNL1Q9UK58 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CCNL1Q9UK58 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.46■■■□□ 2.63
CCNL1Q9UK58 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CCNL1Q9UK58 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CCNL1Q9UK58 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC31.44■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms