Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.67■■□□□ 1.7
ATXN3LQ9H3M9 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ATXN3LQ9H3M9 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
ATXN3LQ9H3M9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
ATXN3LQ9H3M9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.66■■□□□ 1.7
ATXN3LQ9H3M9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ATXN3LQ9H3M9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ATXN3LQ9H3M9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ATXN3LQ9H3M9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
ATXN3LQ9H3M9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25.65■■□□□ 1.7
ATXN3LQ9H3M9 AC074183.2-201ENST00000623112 922 ntBASIC25.65■■□□□ 1.7
ATXN3LQ9H3M9 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.65■■□□□ 1.7
ATXN3LQ9H3M9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
ATXN3LQ9H3M9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ATXN3LQ9H3M9 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.64■■□□□ 1.7
ATXN3LQ9H3M9 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
ATXN3LQ9H3M9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
ATXN3LQ9H3M9 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ATXN3LQ9H3M9 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.63■■□□□ 1.69
ATXN3LQ9H3M9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.63■■□□□ 1.69
ATXN3LQ9H3M9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ATXN3LQ9H3M9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.63■■□□□ 1.69
ATXN3LQ9H3M9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.62■■□□□ 1.69
ATXN3LQ9H3M9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
ATXN3LQ9H3M9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
ATXN3LQ9H3M9 KRT8P33-201ENST00000508125 1423 ntBASIC25.62■■□□□ 1.69
ATXN3LQ9H3M9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ATXN3LQ9H3M9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.61■■□□□ 1.69
ATXN3LQ9H3M9 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ATXN3LQ9H3M9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.61■■□□□ 1.69
ATXN3LQ9H3M9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.61■■□□□ 1.69
ATXN3LQ9H3M9 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
ATXN3LQ9H3M9 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
ATXN3LQ9H3M9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ATXN3LQ9H3M9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ATXN3LQ9H3M9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ATXN3LQ9H3M9 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.6■■□□□ 1.69
ATXN3LQ9H3M9 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
ATXN3LQ9H3M9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
ATXN3LQ9H3M9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
ATXN3LQ9H3M9 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.59■■□□□ 1.69
ATXN3LQ9H3M9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC25.59■■□□□ 1.69
ATXN3LQ9H3M9 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
ATXN3LQ9H3M9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
ATXN3LQ9H3M9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.58■■□□□ 1.69
ATXN3LQ9H3M9 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
ATXN3LQ9H3M9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.58■■□□□ 1.69
ATXN3LQ9H3M9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.58■■□□□ 1.69
ATXN3LQ9H3M9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.57■■□□□ 1.68
ATXN3LQ9H3M9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ATXN3LQ9H3M9 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ATXN3LQ9H3M9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
ATXN3LQ9H3M9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ATXN3LQ9H3M9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.57■■□□□ 1.68
ATXN3LQ9H3M9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.56■■□□□ 1.68
ATXN3LQ9H3M9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.56■■□□□ 1.68
ATXN3LQ9H3M9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.56■■□□□ 1.68
ATXN3LQ9H3M9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ATXN3LQ9H3M9 AL449106.1-201ENST00000608517 1980 ntBASIC25.56■■□□□ 1.68
ATXN3LQ9H3M9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ATXN3LQ9H3M9 LINC01003-201ENST00000564834 1764 ntBASIC25.56■■□□□ 1.68
ATXN3LQ9H3M9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
ATXN3LQ9H3M9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ATXN3LQ9H3M9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ATXN3LQ9H3M9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ATXN3LQ9H3M9 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
ATXN3LQ9H3M9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.55■■□□□ 1.68
ATXN3LQ9H3M9 AL451085.2-201ENST00000605085 799 ntBASIC25.55■■□□□ 1.68
ATXN3LQ9H3M9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
ATXN3LQ9H3M9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ATXN3LQ9H3M9 BX255925.1-201ENST00000566954 1854 ntBASIC25.54■■□□□ 1.68
ATXN3LQ9H3M9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ATXN3LQ9H3M9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.54■■□□□ 1.68
ATXN3LQ9H3M9 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ATXN3LQ9H3M9 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
ATXN3LQ9H3M9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
ATXN3LQ9H3M9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
ATXN3LQ9H3M9 YBX1P4-201ENST00000392794 808 ntBASIC25.53■■□□□ 1.68
ATXN3LQ9H3M9 PVT1_1.1-201ENST00000615125 194 ntBASIC25.53■■□□□ 1.68
ATXN3LQ9H3M9 AL035685.1-201ENST00000636663 812 ntBASIC25.53■■□□□ 1.68
ATXN3LQ9H3M9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
ATXN3LQ9H3M9 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.53■■□□□ 1.68
ATXN3LQ9H3M9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
ATXN3LQ9H3M9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.52■■□□□ 1.68
ATXN3LQ9H3M9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ATXN3LQ9H3M9 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.52■■□□□ 1.68
ATXN3LQ9H3M9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
ATXN3LQ9H3M9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
ATXN3LQ9H3M9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ATXN3LQ9H3M9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
ATXN3LQ9H3M9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ATXN3LQ9H3M9 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.51■■□□□ 1.67
ATXN3LQ9H3M9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ATXN3LQ9H3M9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
ATXN3LQ9H3M9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
ATXN3LQ9H3M9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.5■■□□□ 1.67
ATXN3LQ9H3M9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ATXN3LQ9H3M9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ATXN3LQ9H3M9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
ATXN3LQ9H3M9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms