Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
LRCH3Q96II8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.82■■□□□ 1.88
LRCH3Q96II8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
LRCH3Q96II8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.82■■□□□ 1.88
LRCH3Q96II8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.82■■□□□ 1.88
LRCH3Q96II8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
LRCH3Q96II8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
LRCH3Q96II8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.81■■□□□ 1.88
LRCH3Q96II8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
LRCH3Q96II8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
LRCH3Q96II8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.81■■□□□ 1.88
LRCH3Q96II8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.81■■□□□ 1.88
LRCH3Q96II8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
LRCH3Q96II8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
LRCH3Q96II8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
LRCH3Q96II8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
LRCH3Q96II8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
LRCH3Q96II8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
LRCH3Q96II8 MIR5787-201ENST00000611784 55 ntBASIC26.8■■□□□ 1.88
LRCH3Q96II8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
LRCH3Q96II8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
LRCH3Q96II8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.79■■□□□ 1.88
LRCH3Q96II8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.79■■□□□ 1.88
LRCH3Q96II8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.79■■□□□ 1.88
LRCH3Q96II8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
LRCH3Q96II8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.78■■□□□ 1.88
LRCH3Q96II8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC26.78■■□□□ 1.88
LRCH3Q96II8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.78■■□□□ 1.88
LRCH3Q96II8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
LRCH3Q96II8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
LRCH3Q96II8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
LRCH3Q96II8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
LRCH3Q96II8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
LRCH3Q96II8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.76■■□□□ 1.87
LRCH3Q96II8 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
LRCH3Q96II8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
LRCH3Q96II8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
LRCH3Q96II8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
LRCH3Q96II8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
LRCH3Q96II8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
LRCH3Q96II8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.75■■□□□ 1.87
LRCH3Q96II8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.75■■□□□ 1.87
LRCH3Q96II8 AC133561.4-201ENST00000566112 224 ntBASIC26.75■■□□□ 1.87
LRCH3Q96II8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
LRCH3Q96II8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.75■■□□□ 1.87
LRCH3Q96II8 AC135279.3-201ENST00000610945 1311 ntBASIC26.74■■□□□ 1.87
LRCH3Q96II8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
LRCH3Q96II8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
LRCH3Q96II8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.73■■□□□ 1.87
LRCH3Q96II8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
LRCH3Q96II8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
LRCH3Q96II8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.72■■□□□ 1.87
LRCH3Q96II8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.72■■□□□ 1.87
LRCH3Q96II8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
LRCH3Q96II8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
LRCH3Q96II8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
LRCH3Q96II8 AC087393.1-201ENST00000582896 145 ntBASIC26.71■■□□□ 1.87
LRCH3Q96II8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
LRCH3Q96II8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
LRCH3Q96II8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
LRCH3Q96II8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.69■■□□□ 1.86
LRCH3Q96II8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
LRCH3Q96II8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26.69■■□□□ 1.86
LRCH3Q96II8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
LRCH3Q96II8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
LRCH3Q96II8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
LRCH3Q96II8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.68■■□□□ 1.86
LRCH3Q96II8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.68■■□□□ 1.86
LRCH3Q96II8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.68■■□□□ 1.86
LRCH3Q96II8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
LRCH3Q96II8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.68■■□□□ 1.86
LRCH3Q96II8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
LRCH3Q96II8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.67■■□□□ 1.86
LRCH3Q96II8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
LRCH3Q96II8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
LRCH3Q96II8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
LRCH3Q96II8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26.66■■□□□ 1.86
LRCH3Q96II8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
LRCH3Q96II8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
LRCH3Q96II8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
LRCH3Q96II8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.65■■□□□ 1.86
LRCH3Q96II8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
LRCH3Q96II8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
LRCH3Q96II8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC26.64■■□□□ 1.86
LRCH3Q96II8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.64■■□□□ 1.86
LRCH3Q96II8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.64■■□□□ 1.86
LRCH3Q96II8 AL117332.1-201ENST00000622628 974 ntBASIC26.64■■□□□ 1.86
LRCH3Q96II8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.64■■□□□ 1.85
LRCH3Q96II8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
LRCH3Q96II8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
LRCH3Q96II8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
LRCH3Q96II8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
LRCH3Q96II8 MIR4466-201ENST00000606121 54 ntBASIC26.62■■□□□ 1.85
LRCH3Q96II8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
LRCH3Q96II8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.61■■□□□ 1.85
LRCH3Q96II8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
LRCH3Q96II8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
LRCH3Q96II8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
LRCH3Q96II8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.6■■□□□ 1.85
LRCH3Q96II8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.6■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms