Protein–RNA interactions for Protein: Q96AT9

RPE, Ribulose-phosphate 3-epimerase, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPEQ96AT9 SMPD5-203ENST00000639008 1464 ntBASIC19.83■□□□□ 0.76
RPEQ96AT9 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RPEQ96AT9 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RPEQ96AT9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
RPEQ96AT9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.82■□□□□ 0.76
RPEQ96AT9 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPEQ96AT9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.82■□□□□ 0.76
RPEQ96AT9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RPEQ96AT9 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.82■□□□□ 0.76
RPEQ96AT9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPEQ96AT9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.82■□□□□ 0.76
RPEQ96AT9 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPEQ96AT9 HSD17B1P1-201ENST00000590052 955 ntBASIC19.81■□□□□ 0.76
RPEQ96AT9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPEQ96AT9 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPEQ96AT9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPEQ96AT9 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPEQ96AT9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RPEQ96AT9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPEQ96AT9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RPEQ96AT9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPEQ96AT9 RNF126P1-201ENST00000567452 1320 ntBASIC19.8■□□□□ 0.76
RPEQ96AT9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPEQ96AT9 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPEQ96AT9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.8■□□□□ 0.76
RPEQ96AT9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPEQ96AT9 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.79■□□□□ 0.76
RPEQ96AT9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.79■□□□□ 0.76
RPEQ96AT9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPEQ96AT9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPEQ96AT9 AC025884.2-201ENST00000553429 711 ntBASIC19.79■□□□□ 0.76
RPEQ96AT9 MIR3960-201ENST00000583311 91 ntBASIC19.79■□□□□ 0.76
RPEQ96AT9 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPEQ96AT9 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPEQ96AT9 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPEQ96AT9 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPEQ96AT9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.78■□□□□ 0.76
RPEQ96AT9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPEQ96AT9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.78■□□□□ 0.76
RPEQ96AT9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPEQ96AT9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPEQ96AT9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPEQ96AT9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPEQ96AT9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.77■□□□□ 0.76
RPEQ96AT9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPEQ96AT9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPEQ96AT9 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
RPEQ96AT9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.76■□□□□ 0.75
RPEQ96AT9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPEQ96AT9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPEQ96AT9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RPEQ96AT9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPEQ96AT9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.76■□□□□ 0.75
RPEQ96AT9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPEQ96AT9 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPEQ96AT9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.75■□□□□ 0.75
RPEQ96AT9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPEQ96AT9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPEQ96AT9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.75■□□□□ 0.75
RPEQ96AT9 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RPEQ96AT9 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.75■□□□□ 0.75
RPEQ96AT9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.75■□□□□ 0.75
RPEQ96AT9 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.75■□□□□ 0.75
RPEQ96AT9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.75■□□□□ 0.75
RPEQ96AT9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RPEQ96AT9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPEQ96AT9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPEQ96AT9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPEQ96AT9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPEQ96AT9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.74■□□□□ 0.75
RPEQ96AT9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
RPEQ96AT9 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPEQ96AT9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPEQ96AT9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RPEQ96AT9 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RPEQ96AT9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPEQ96AT9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPEQ96AT9 RARRES2P2-201ENST00000394842 485 ntBASIC19.73■□□□□ 0.75
RPEQ96AT9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.73■□□□□ 0.75
RPEQ96AT9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.73■□□□□ 0.75
RPEQ96AT9 AC007029.1-201ENST00000604183 313 ntBASIC19.73■□□□□ 0.75
RPEQ96AT9 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPEQ96AT9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.73■□□□□ 0.75
RPEQ96AT9 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPEQ96AT9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.73■□□□□ 0.75
RPEQ96AT9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPEQ96AT9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
RPEQ96AT9 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPEQ96AT9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPEQ96AT9 RP9P-202ENST00000450133 1212 ntBASIC19.72■□□□□ 0.75
RPEQ96AT9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPEQ96AT9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPEQ96AT9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RPEQ96AT9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPEQ96AT9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.7■□□□□ 0.74
RPEQ96AT9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPEQ96AT9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPEQ96AT9 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPEQ96AT9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
RPEQ96AT9 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms