Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RDH13Q8NBN7 SMPD5-203ENST00000639008 1464 ntBASIC26.68■■□□□ 1.86
RDH13Q8NBN7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.67■■□□□ 1.86
RDH13Q8NBN7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
RDH13Q8NBN7 ECEL1P2-201ENST00000461596 1295 ntBASIC26.67■■□□□ 1.86
RDH13Q8NBN7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.67■■□□□ 1.86
RDH13Q8NBN7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
RDH13Q8NBN7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.66■■□□□ 1.86
RDH13Q8NBN7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.66■■□□□ 1.86
RDH13Q8NBN7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RDH13Q8NBN7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RDH13Q8NBN7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RDH13Q8NBN7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RDH13Q8NBN7 HSD17B1P1-201ENST00000590052 955 ntBASIC26.65■■□□□ 1.86
RDH13Q8NBN7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.65■■□□□ 1.86
RDH13Q8NBN7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
RDH13Q8NBN7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RDH13Q8NBN7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.64■■□□□ 1.86
RDH13Q8NBN7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.64■■□□□ 1.86
RDH13Q8NBN7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RDH13Q8NBN7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RDH13Q8NBN7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RDH13Q8NBN7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RDH13Q8NBN7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.63■■□□□ 1.85
RDH13Q8NBN7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.63■■□□□ 1.85
RDH13Q8NBN7 AC025884.2-201ENST00000553429 711 ntBASIC26.63■■□□□ 1.85
RDH13Q8NBN7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.63■■□□□ 1.85
RDH13Q8NBN7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RDH13Q8NBN7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.63■■□□□ 1.85
RDH13Q8NBN7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.63■■□□□ 1.85
RDH13Q8NBN7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RDH13Q8NBN7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RDH13Q8NBN7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RDH13Q8NBN7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RDH13Q8NBN7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RDH13Q8NBN7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.61■■□□□ 1.85
RDH13Q8NBN7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
RDH13Q8NBN7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.6■■□□□ 1.85
RDH13Q8NBN7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RDH13Q8NBN7 RNF126P1-201ENST00000567452 1320 ntBASIC26.6■■□□□ 1.85
RDH13Q8NBN7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
RDH13Q8NBN7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.59■■□□□ 1.85
RDH13Q8NBN7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RDH13Q8NBN7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RDH13Q8NBN7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RDH13Q8NBN7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RDH13Q8NBN7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
RDH13Q8NBN7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.58■■□□□ 1.85
RDH13Q8NBN7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RDH13Q8NBN7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.58■■□□□ 1.84
RDH13Q8NBN7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RDH13Q8NBN7 AC091060.1-201ENST00000623524 1766 ntBASIC26.57■■□□□ 1.84
RDH13Q8NBN7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RDH13Q8NBN7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.57■■□□□ 1.84
RDH13Q8NBN7 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.57■■□□□ 1.84
RDH13Q8NBN7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.56■■□□□ 1.84
RDH13Q8NBN7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.56■■□□□ 1.84
RDH13Q8NBN7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.55■■□□□ 1.84
RDH13Q8NBN7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RDH13Q8NBN7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RDH13Q8NBN7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
RDH13Q8NBN7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RDH13Q8NBN7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RDH13Q8NBN7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RDH13Q8NBN7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RDH13Q8NBN7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RDH13Q8NBN7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.54■■□□□ 1.84
RDH13Q8NBN7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RDH13Q8NBN7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
RDH13Q8NBN7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RDH13Q8NBN7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.53■■□□□ 1.84
RDH13Q8NBN7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RDH13Q8NBN7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
RDH13Q8NBN7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.53■■□□□ 1.84
RDH13Q8NBN7 AC092803.2-201ENST00000564287 1899 ntBASIC26.53■■□□□ 1.84
RDH13Q8NBN7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
RDH13Q8NBN7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.53■■□□□ 1.84
RDH13Q8NBN7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.53■■□□□ 1.84
RDH13Q8NBN7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
RDH13Q8NBN7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RDH13Q8NBN7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
RDH13Q8NBN7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.52■■□□□ 1.84
RDH13Q8NBN7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RDH13Q8NBN7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RDH13Q8NBN7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.52■■□□□ 1.84
RDH13Q8NBN7 MIR3960-201ENST00000583311 91 ntBASIC26.52■■□□□ 1.84
RDH13Q8NBN7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.52■■□□□ 1.84
RDH13Q8NBN7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.52■■□□□ 1.84
RDH13Q8NBN7 RARRES2P2-201ENST00000394842 485 ntBASIC26.51■■□□□ 1.83
RDH13Q8NBN7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
RDH13Q8NBN7 AC007029.1-201ENST00000604183 313 ntBASIC26.51■■□□□ 1.83
RDH13Q8NBN7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.51■■□□□ 1.83
RDH13Q8NBN7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.51■■□□□ 1.83
RDH13Q8NBN7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RDH13Q8NBN7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.51■■□□□ 1.83
RDH13Q8NBN7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.5■■□□□ 1.83
RDH13Q8NBN7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RDH13Q8NBN7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RDH13Q8NBN7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.5■■□□□ 1.83
RDH13Q8NBN7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms