Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRIML2Q8N7C3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRIML2Q8N7C3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TRIML2Q8N7C3 AC092803.2-201ENST00000564287 1899 ntBASIC23.24■■□□□ 1.31
TRIML2Q8N7C3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.24■■□□□ 1.31
TRIML2Q8N7C3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIML2Q8N7C3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIML2Q8N7C3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
TRIML2Q8N7C3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIML2Q8N7C3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIML2Q8N7C3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TRIML2Q8N7C3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
TRIML2Q8N7C3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIML2Q8N7C3 RPS2P35-201ENST00000443417 897 ntBASIC23.22■■□□□ 1.31
TRIML2Q8N7C3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TRIML2Q8N7C3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIML2Q8N7C3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TRIML2Q8N7C3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TRIML2Q8N7C3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRIML2Q8N7C3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TRIML2Q8N7C3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.21■■□□□ 1.31
TRIML2Q8N7C3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.31
TRIML2Q8N7C3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIML2Q8N7C3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIML2Q8N7C3 DUX4L13-201ENST00000554103 1267 ntBASIC23.2■■□□□ 1.3
TRIML2Q8N7C3 DUX4L15-201ENST00000611059 1267 ntBASIC23.2■■□□□ 1.3
TRIML2Q8N7C3 DUX4L23-201ENST00000615195 1269 ntBASIC23.2■■□□□ 1.3
TRIML2Q8N7C3 DUX4L24-201ENST00000617576 1269 ntBASIC23.2■■□□□ 1.3
TRIML2Q8N7C3 DUX4L22-201ENST00000618238 1269 ntBASIC23.2■■□□□ 1.3
TRIML2Q8N7C3 DUX4L20-201ENST00000619712 1269 ntBASIC23.2■■□□□ 1.3
TRIML2Q8N7C3 DUX4L21-201ENST00000622058 1269 ntBASIC23.2■■□□□ 1.3
TRIML2Q8N7C3 DUX4L10-201ENST00000622460 1267 ntBASIC23.2■■□□□ 1.3
TRIML2Q8N7C3 DUX4L25-201ENST00000624915 1269 ntBASIC23.2■■□□□ 1.3
TRIML2Q8N7C3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
TRIML2Q8N7C3 DUSP8P4-201ENST00000399538 1761 ntBASIC23.19■■□□□ 1.3
TRIML2Q8N7C3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIML2Q8N7C3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIML2Q8N7C3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIML2Q8N7C3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIML2Q8N7C3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIML2Q8N7C3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
TRIML2Q8N7C3 AC008813.1-201ENST00000536597 885 ntBASIC23.19■■□□□ 1.3
TRIML2Q8N7C3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
TRIML2Q8N7C3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIML2Q8N7C3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.19■■□□□ 1.3
TRIML2Q8N7C3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.18■■□□□ 1.3
TRIML2Q8N7C3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
TRIML2Q8N7C3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.18■■□□□ 1.3
TRIML2Q8N7C3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIML2Q8N7C3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.18■■□□□ 1.3
TRIML2Q8N7C3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIML2Q8N7C3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIML2Q8N7C3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.18■■□□□ 1.3
TRIML2Q8N7C3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.18■■□□□ 1.3
TRIML2Q8N7C3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.17■■□□□ 1.3
TRIML2Q8N7C3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIML2Q8N7C3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIML2Q8N7C3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIML2Q8N7C3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
TRIML2Q8N7C3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
TRIML2Q8N7C3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
TRIML2Q8N7C3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIML2Q8N7C3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.16■■□□□ 1.3
TRIML2Q8N7C3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
TRIML2Q8N7C3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
TRIML2Q8N7C3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIML2Q8N7C3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIML2Q8N7C3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.15■■□□□ 1.3
TRIML2Q8N7C3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.15■■□□□ 1.3
TRIML2Q8N7C3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.15■■□□□ 1.3
TRIML2Q8N7C3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIML2Q8N7C3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIML2Q8N7C3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIML2Q8N7C3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIML2Q8N7C3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRIML2Q8N7C3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
TRIML2Q8N7C3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.14■■□□□ 1.3
TRIML2Q8N7C3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TRIML2Q8N7C3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIML2Q8N7C3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIML2Q8N7C3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIML2Q8N7C3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIML2Q8N7C3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIML2Q8N7C3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIML2Q8N7C3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIML2Q8N7C3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.13■■□□□ 1.29
TRIML2Q8N7C3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIML2Q8N7C3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIML2Q8N7C3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIML2Q8N7C3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIML2Q8N7C3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.13■■□□□ 1.29
TRIML2Q8N7C3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIML2Q8N7C3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRIML2Q8N7C3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRIML2Q8N7C3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.12■■□□□ 1.29
TRIML2Q8N7C3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIML2Q8N7C3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.12■■□□□ 1.29
TRIML2Q8N7C3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIML2Q8N7C3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIML2Q8N7C3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms