Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 MIR4449-201ENST00000578365 66 ntBASIC19.22■□□□□ 0.67
TTC9CQ8N5M4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.22■□□□□ 0.67
TTC9CQ8N5M4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.22■□□□□ 0.67
TTC9CQ8N5M4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC9CQ8N5M4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.22■□□□□ 0.67
TTC9CQ8N5M4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TTC9CQ8N5M4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC9CQ8N5M4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
TTC9CQ8N5M4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TTC9CQ8N5M4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TTC9CQ8N5M4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC9CQ8N5M4 AC060814.1-201ENST00000554326 538 ntBASIC19.21■□□□□ 0.67
TTC9CQ8N5M4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.21■□□□□ 0.67
TTC9CQ8N5M4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TTC9CQ8N5M4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TTC9CQ8N5M4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.19■□□□□ 0.66
TTC9CQ8N5M4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TTC9CQ8N5M4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.19■□□□□ 0.66
TTC9CQ8N5M4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TTC9CQ8N5M4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TTC9CQ8N5M4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC9CQ8N5M4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC9CQ8N5M4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TTC9CQ8N5M4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TTC9CQ8N5M4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC9CQ8N5M4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC9CQ8N5M4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC9CQ8N5M4 DUSP8P4-201ENST00000399538 1761 ntBASIC19.17■□□□□ 0.66
TTC9CQ8N5M4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TTC9CQ8N5M4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.17■□□□□ 0.66
TTC9CQ8N5M4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC9CQ8N5M4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC9CQ8N5M4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC9CQ8N5M4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC9CQ8N5M4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.17■□□□□ 0.66
TTC9CQ8N5M4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.16■□□□□ 0.66
TTC9CQ8N5M4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC9CQ8N5M4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC9CQ8N5M4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TTC9CQ8N5M4 AC022413.1-201ENST00000624602 984 ntBASIC19.16■□□□□ 0.66
TTC9CQ8N5M4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
TTC9CQ8N5M4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC9CQ8N5M4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TTC9CQ8N5M4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.16■□□□□ 0.66
TTC9CQ8N5M4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC9CQ8N5M4 AC135731.1-201ENST00000569415 2548 ntBASIC19.15■□□□□ 0.66
TTC9CQ8N5M4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TTC9CQ8N5M4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TTC9CQ8N5M4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TTC9CQ8N5M4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.15■□□□□ 0.66
TTC9CQ8N5M4 AL157400.5-201ENST00000507624 621 ntBASIC19.15■□□□□ 0.66
TTC9CQ8N5M4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TTC9CQ8N5M4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TTC9CQ8N5M4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TTC9CQ8N5M4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TTC9CQ8N5M4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TTC9CQ8N5M4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TTC9CQ8N5M4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.14■□□□□ 0.65
TTC9CQ8N5M4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TTC9CQ8N5M4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TTC9CQ8N5M4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TTC9CQ8N5M4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TTC9CQ8N5M4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
TTC9CQ8N5M4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TTC9CQ8N5M4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.13■□□□□ 0.65
TTC9CQ8N5M4 AC092296.2-201ENST00000589470 999 ntBASIC19.13■□□□□ 0.65
TTC9CQ8N5M4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.13■□□□□ 0.65
TTC9CQ8N5M4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TTC9CQ8N5M4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TTC9CQ8N5M4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TTC9CQ8N5M4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TTC9CQ8N5M4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TTC9CQ8N5M4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.12■□□□□ 0.65
TTC9CQ8N5M4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.12■□□□□ 0.65
TTC9CQ8N5M4 AC025884.2-201ENST00000553429 711 ntBASIC19.12■□□□□ 0.65
TTC9CQ8N5M4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.12■□□□□ 0.65
TTC9CQ8N5M4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TTC9CQ8N5M4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TTC9CQ8N5M4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TTC9CQ8N5M4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TTC9CQ8N5M4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.11■□□□□ 0.65
TTC9CQ8N5M4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.11■□□□□ 0.65
TTC9CQ8N5M4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TTC9CQ8N5M4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TTC9CQ8N5M4 ECEL1P2-201ENST00000461596 1295 ntBASIC19.11■□□□□ 0.65
TTC9CQ8N5M4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.11■□□□□ 0.65
TTC9CQ8N5M4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
TTC9CQ8N5M4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TTC9CQ8N5M4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TTC9CQ8N5M4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.1■□□□□ 0.65
TTC9CQ8N5M4 SMPD5-203ENST00000639008 1464 ntBASIC19.1■□□□□ 0.65
TTC9CQ8N5M4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TTC9CQ8N5M4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TTC9CQ8N5M4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TTC9CQ8N5M4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TTC9CQ8N5M4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TTC9CQ8N5M4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TTC9CQ8N5M4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TTC9CQ8N5M4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.09■□□□□ 0.65
TTC9CQ8N5M4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms