Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC26.7■■□□□ 1.87
TTC9CQ8N5M4 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TTC9CQ8N5M4 AL356512.1-201ENST00000607453 1739 ntBASIC26.14■■□□□ 1.78
TTC9CQ8N5M4 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
TTC9CQ8N5M4 HES6-203ENST00000409160 1600 ntTSL 2 BASIC25.92■■□□□ 1.74
TTC9CQ8N5M4 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TTC9CQ8N5M4 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TTC9CQ8N5M4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
TTC9CQ8N5M4 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC25.71■■□□□ 1.71
TTC9CQ8N5M4 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC25.66■■□□□ 1.7
TTC9CQ8N5M4 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC25.42■■□□□ 1.66
TTC9CQ8N5M4 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
TTC9CQ8N5M4 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC25.4■■□□□ 1.66
TTC9CQ8N5M4 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TTC9CQ8N5M4 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
TTC9CQ8N5M4 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
TTC9CQ8N5M4 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
TTC9CQ8N5M4 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
TTC9CQ8N5M4 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC24.63■■□□□ 1.53
TTC9CQ8N5M4 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC24.63■■□□□ 1.53
TTC9CQ8N5M4 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC24.58■■□□□ 1.53
TTC9CQ8N5M4 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
TTC9CQ8N5M4 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
TTC9CQ8N5M4 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
TTC9CQ8N5M4 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
TTC9CQ8N5M4 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC24.43■■□□□ 1.5
TTC9CQ8N5M4 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
TTC9CQ8N5M4 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TTC9CQ8N5M4 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TTC9CQ8N5M4 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TTC9CQ8N5M4 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC24.23■■□□□ 1.47
TTC9CQ8N5M4 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
TTC9CQ8N5M4 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TTC9CQ8N5M4 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TTC9CQ8N5M4 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC24.06■■□□□ 1.44
TTC9CQ8N5M4 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC24.02■■□□□ 1.44
TTC9CQ8N5M4 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TTC9CQ8N5M4 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
TTC9CQ8N5M4 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TTC9CQ8N5M4 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC23.86■■□□□ 1.41
TTC9CQ8N5M4 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TTC9CQ8N5M4 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
TTC9CQ8N5M4 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TTC9CQ8N5M4 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC9CQ8N5M4 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
TTC9CQ8N5M4 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC9CQ8N5M4 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TTC9CQ8N5M4 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TTC9CQ8N5M4 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC23.6■■□□□ 1.37
TTC9CQ8N5M4 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
TTC9CQ8N5M4 ILK-212ENST00000532063 1617 ntTSL 2 BASIC23.55■■□□□ 1.36
TTC9CQ8N5M4 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC23.52■■□□□ 1.36
TTC9CQ8N5M4 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TTC9CQ8N5M4 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
TTC9CQ8N5M4 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
TTC9CQ8N5M4 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC23.48■■□□□ 1.35
TTC9CQ8N5M4 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TTC9CQ8N5M4 INO80B-203ENST00000409917 796 ntTSL 2 BASIC23.46■■□□□ 1.35
TTC9CQ8N5M4 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TTC9CQ8N5M4 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TTC9CQ8N5M4 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
TTC9CQ8N5M4 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC23.41■■□□□ 1.34
TTC9CQ8N5M4 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
TTC9CQ8N5M4 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TTC9CQ8N5M4 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC23.3■■□□□ 1.32
TTC9CQ8N5M4 AC015813.7-201ENST00000623294 581 ntBASIC23.28■■□□□ 1.32
TTC9CQ8N5M4 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC9CQ8N5M4 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TTC9CQ8N5M4 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TTC9CQ8N5M4 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
TTC9CQ8N5M4 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TTC9CQ8N5M4 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TTC9CQ8N5M4 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TTC9CQ8N5M4 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC23.11■■□□□ 1.29
TTC9CQ8N5M4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC9CQ8N5M4 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
TTC9CQ8N5M4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TTC9CQ8N5M4 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TTC9CQ8N5M4 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
TTC9CQ8N5M4 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC23.01■■□□□ 1.27
TTC9CQ8N5M4 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TTC9CQ8N5M4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
TTC9CQ8N5M4 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TTC9CQ8N5M4 AC145285.7-201ENST00000614819 1539 ntBASIC22.91■■□□□ 1.26
TTC9CQ8N5M4 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TTC9CQ8N5M4 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC22.9■■□□□ 1.26
TTC9CQ8N5M4 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TTC9CQ8N5M4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TTC9CQ8N5M4 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TTC9CQ8N5M4 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TTC9CQ8N5M4 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TTC9CQ8N5M4 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TTC9CQ8N5M4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC22.82■■□□□ 1.24
TTC9CQ8N5M4 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TTC9CQ8N5M4 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC22.79■■□□□ 1.24
TTC9CQ8N5M4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
TTC9CQ8N5M4 AC006077.2-201ENST00000623591 457 ntBASIC22.78■■□□□ 1.24
TTC9CQ8N5M4 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TTC9CQ8N5M4 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
TTC9CQ8N5M4 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms