Protein–RNA interactions for Protein: Q8IUA7

ABCA9, ATP-binding cassette sub-family A member 9, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9Q8IUA7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC38.09■■■■□ 3.69
ABCA9Q8IUA7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC38.09■■■■□ 3.69
ABCA9Q8IUA7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
ABCA9Q8IUA7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC38.08■■■■□ 3.69
ABCA9Q8IUA7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
ABCA9Q8IUA7 LONRF2P2-201ENST00000439212 571 ntBASIC38.07■■■■□ 3.68
ABCA9Q8IUA7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC38.07■■■■□ 3.68
ABCA9Q8IUA7 KRT16P3-201ENST00000439127 1283 ntBASIC38.06■■■■□ 3.68
ABCA9Q8IUA7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC38.06■■■■□ 3.68
ABCA9Q8IUA7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC38.06■■■■□ 3.68
ABCA9Q8IUA7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
ABCA9Q8IUA7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC38.05■■■■□ 3.68
ABCA9Q8IUA7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
ABCA9Q8IUA7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC38.04■■■■□ 3.68
ABCA9Q8IUA7 MIR4787-201ENST00000607364 84 ntBASIC38.04■■■■□ 3.68
ABCA9Q8IUA7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC38.04■■■■□ 3.68
ABCA9Q8IUA7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
ABCA9Q8IUA7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC38.03■■■■□ 3.68
ABCA9Q8IUA7 BX664725.1-201ENST00000438252 379 ntBASIC38.02■■■■□ 3.68
ABCA9Q8IUA7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC38.01■■■■□ 3.68
ABCA9Q8IUA7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC38.01■■■■□ 3.68
ABCA9Q8IUA7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC38.01■■■■□ 3.68
ABCA9Q8IUA7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC38.01■■■■□ 3.67
ABCA9Q8IUA7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
ABCA9Q8IUA7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
ABCA9Q8IUA7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC38■■■■□ 3.67
ABCA9Q8IUA7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
ABCA9Q8IUA7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC37.99■■■■□ 3.67
ABCA9Q8IUA7 AC131281.2-201ENST00000520478 145 ntBASIC37.99■■■■□ 3.67
ABCA9Q8IUA7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC37.98■■■■□ 3.67
ABCA9Q8IUA7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC37.98■■■■□ 3.67
ABCA9Q8IUA7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC37.98■■■■□ 3.67
ABCA9Q8IUA7 KRT125P-201ENST00000546827 989 ntBASIC37.98■■■■□ 3.67
ABCA9Q8IUA7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC37.97■■■■□ 3.67
ABCA9Q8IUA7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC37.97■■■■□ 3.67
ABCA9Q8IUA7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC37.95■■■■□ 3.67
ABCA9Q8IUA7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC37.95■■■■□ 3.67
ABCA9Q8IUA7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC37.95■■■■□ 3.67
ABCA9Q8IUA7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC37.95■■■■□ 3.67
ABCA9Q8IUA7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.67
ABCA9Q8IUA7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC37.95■■■■□ 3.66
ABCA9Q8IUA7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC37.94■■■■□ 3.66
ABCA9Q8IUA7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC37.94■■■■□ 3.66
ABCA9Q8IUA7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC37.94■■■■□ 3.66
ABCA9Q8IUA7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC37.94■■■■□ 3.66
ABCA9Q8IUA7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC37.94■■■■□ 3.66
ABCA9Q8IUA7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC37.94■■■■□ 3.66
ABCA9Q8IUA7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC37.93■■■■□ 3.66
ABCA9Q8IUA7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC37.92■■■■□ 3.66
ABCA9Q8IUA7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC37.92■■■■□ 3.66
ABCA9Q8IUA7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC37.92■■■■□ 3.66
ABCA9Q8IUA7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
ABCA9Q8IUA7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
ABCA9Q8IUA7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
ABCA9Q8IUA7 ABCB10P3-201ENST00000561950 2166 ntBASIC37.91■■■■□ 3.66
ABCA9Q8IUA7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC37.91■■■■□ 3.66
ABCA9Q8IUA7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC37.91■■■■□ 3.66
ABCA9Q8IUA7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC37.91■■■■□ 3.66
ABCA9Q8IUA7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC37.91■■■■□ 3.66
ABCA9Q8IUA7 WHAMMP3-201ENST00000611636 1609 ntBASIC37.91■■■■□ 3.66
ABCA9Q8IUA7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC37.9■■■■□ 3.66
ABCA9Q8IUA7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
ABCA9Q8IUA7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
ABCA9Q8IUA7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC37.9■■■■□ 3.66
ABCA9Q8IUA7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC37.9■■■■□ 3.66
ABCA9Q8IUA7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC37.9■■■■□ 3.66
ABCA9Q8IUA7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC37.89■■■■□ 3.66
ABCA9Q8IUA7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC37.88■■■■□ 3.66
ABCA9Q8IUA7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC37.88■■■■□ 3.65
ABCA9Q8IUA7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC37.88■■■■□ 3.65
ABCA9Q8IUA7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC37.88■■■■□ 3.65
ABCA9Q8IUA7 AC022616.5-201ENST00000518796 181 ntBASIC37.87■■■■□ 3.65
ABCA9Q8IUA7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC37.87■■■■□ 3.65
ABCA9Q8IUA7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC37.87■■■■□ 3.65
ABCA9Q8IUA7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
ABCA9Q8IUA7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC37.87■■■■□ 3.65
ABCA9Q8IUA7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC37.87■■■■□ 3.65
ABCA9Q8IUA7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
ABCA9Q8IUA7 AL139246.5-201ENST00000606645 996 ntBASIC37.85■■■■□ 3.65
ABCA9Q8IUA7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
ABCA9Q8IUA7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC37.84■■■■□ 3.65
ABCA9Q8IUA7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC37.84■■■■□ 3.65
ABCA9Q8IUA7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC37.84■■■■□ 3.65
ABCA9Q8IUA7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC37.84■■■■□ 3.65
ABCA9Q8IUA7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC37.83■■■■□ 3.65
ABCA9Q8IUA7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC37.83■■■■□ 3.65
ABCA9Q8IUA7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC37.83■■■■□ 3.65
ABCA9Q8IUA7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC37.83■■■■□ 3.65
ABCA9Q8IUA7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC37.81■■■■□ 3.64
ABCA9Q8IUA7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
ABCA9Q8IUA7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC37.81■■■■□ 3.64
ABCA9Q8IUA7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC37.81■■■■□ 3.64
ABCA9Q8IUA7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC37.81■■■■□ 3.64
ABCA9Q8IUA7 RALB-208ENST00000631312 311 ntTSL 5 BASIC37.8■■■■□ 3.64
ABCA9Q8IUA7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC37.8■■■■□ 3.64
ABCA9Q8IUA7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC37.8■■■■□ 3.64
ABCA9Q8IUA7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC37.8■■■■□ 3.64
ABCA9Q8IUA7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC37.8■■■■□ 3.64
ABCA9Q8IUA7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC37.8■■■■□ 3.64
ABCA9Q8IUA7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC37.79■■■■□ 3.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms