Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.133e-6■■■■□ 23.3
PABPN1Q86U42 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC13.88□□□□□ -0.193e-6■■■■□ 23.3
PABPN1Q86U42 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.283e-6■■■■□ 23.3
PABPN1Q86U42 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC12.9□□□□□ -0.343e-6■■■■□ 23.3
PABPN1Q86U42 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC12.39□□□□□ -0.433e-6■■■■□ 23.3
PABPN1Q86U42 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC12.11□□□□□ -0.473e-6■■■■□ 23.3
PABPN1Q86U42 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC11.93□□□□□ -0.53e-6■■■■□ 23.3
PABPN1Q86U42 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC10.95□□□□□ -0.663e-6■■■■□ 23.3
PABPN1Q86U42 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC10.94□□□□□ -0.663e-6■■■■□ 23.3
PABPN1Q86U42 BRD8-211ENST00000441656 2899 ntTSL 510.55□□□□□ -0.723e-6■■■■□ 23.3
PABPN1Q86U42 BRD8-224ENST00000512140 2876 ntTSL 210.48□□□□□ -0.733e-6■■■■□ 23.3
PABPN1Q86U42 BRD8-214ENST00000454473 3005 ntTSL 59.96□□□□□ -0.823e-6■■■■□ 23.3
PABPN1Q86U42 BRD8-205ENST00000418329 2912 ntTSL 59.91□□□□□ -0.823e-6■■■■□ 23.3
PABPN1Q86U42 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.843e-6■■■■□ 23.3
PABPN1Q86U42 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC34.53■■■■□ 3.125e-10■■■■□ 23.2
PABPN1Q86U42 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.975e-10■■■■□ 23.2
PABPN1Q86U42 PMPCA-204ENST00000444897 2316 ntTSL 224.43■■□□□ 1.55e-10■■■■□ 23.2
PABPN1Q86U42 NDUFV1-228ENST00000534352 573 ntTSL 239.75■■■■□ 3.958e-7■■■■□ 23.2
PABPN1Q86U42 NT5DC2-209ENST00000478091 590 ntTSL 337.68■■■■□ 3.621e-6■■■■□ 23.2
PABPN1Q86U42 RASSF4-211ENST00000489171 4350 ntTSL 1 (best)26.77■■□□□ 1.884e-6■■■■□ 23.2
PABPN1Q86U42 RASSF4-201ENST00000340258 3641 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.024e-6■■■■□ 23.2
PABPN1Q86U42 PIN1-202ENST00000380889 1670 ntTSL 1 (best)39.83■■■■□ 3.972e-6■■■■□ 23.2
PABPN1Q86U42 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.412e-6■■■■□ 23.2
PABPN1Q86U42 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.132e-6■■■■□ 23.2
PABPN1Q86U42 PIN1-209ENST00000590540 702 ntTSL 327.98■■■□□ 2.072e-6■■■■□ 23.2
PABPN1Q86U42 PIN1-210ENST00000591777 533 ntTSL 325.38■■□□□ 1.652e-6■■■■□ 23.2
PABPN1Q86U42 PIN1-204ENST00000586025 4022 ntTSL 223.82■■□□□ 1.42e-6■■■■□ 23.2
PABPN1Q86U42 TCIRG1-205ENST00000525724 1864 ntTSL 534.65■■■■□ 3.143e-7■■■■□ 23.1
PABPN1Q86U42 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC30.8■■■□□ 2.523e-7■■■■□ 23.1
PABPN1Q86U42 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.093e-7■■■■□ 23.1
PABPN1Q86U42 STXBP2-208ENST00000595800 1974 ntTSL 235.71■■■■□ 3.313e-7■■■■□ 23.1
PABPN1Q86U42 CHRD-216ENST00000486066 546 ntTSL 441.75■■■■■ 4.272e-7■■■■□ 23.1
PABPN1Q86U42 FANCA-226ENST00000567879 713 ntAPPRIS ALT2 TSL 327.56■■■□□ 22e-7■■■■□ 23
PABPN1Q86U42 SBF1-206ENST00000473724 446 ntTSL 227.44■■□□□ 1.985e-7■■■■□ 23
PABPN1Q86U42 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC50.38■■■■■ 5.652e-6■■■■□ 23
PABPN1Q86U42 PNCK-227ENST00000475172 877 ntTSL 548.78■■■■■ 5.42e-6■■■■□ 23
PABPN1Q86U42 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC41.81■■■■■ 4.282e-6■■■■□ 23
PABPN1Q86U42 CNDP2-204ENST00000577409 422 ntTSL 241.47■■■■■ 4.232e-6■■■■□ 23
PABPN1Q86U42 CNDP2-214ENST00000581600 500 ntTSL 238.38■■■■□ 3.732e-6■■■■□ 23
PABPN1Q86U42 PNCK-230ENST00000488168 976 ntTSL 336.24■■■■□ 3.392e-6■■■■□ 23
PABPN1Q86U42 UNC45A-204ENST00000471780 1730 ntTSL 534.92■■■■□ 3.182e-6■■■■□ 23
PABPN1Q86U42 PIN1-205ENST00000586352 755 ntTSL 332.45■■■□□ 2.792e-6■■■■□ 23
PABPN1Q86U42 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC30.83■■■□□ 2.532e-6■■■■□ 23
PABPN1Q86U42 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC30.54■■■□□ 2.482e-6■■■■□ 23
PABPN1Q86U42 SMURF1-203ENST00000472627 825 ntTSL 230.26■■■□□ 2.432e-6■■■■□ 23
PABPN1Q86U42 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.142e-6■■■■□ 23
PABPN1Q86U42 EFEMP2-215ENST00000531005 2135 ntTSL 527.44■■□□□ 1.982e-6■■■■□ 23
PABPN1Q86U42 UNC45A-207ENST00000487875 2641 ntTSL 223.03■■□□□ 1.282e-6■■■■□ 23
PABPN1Q86U42 CNDP2-223ENST00000583695 559 ntTSL 422.41■■□□□ 1.182e-6■■■■□ 23
PABPN1Q86U42 EFEMP2-213ENST00000530806 408 ntTSL 521.94■■□□□ 1.12e-6■■■■□ 23
PABPN1Q86U42 ZNF83-218ENST00000601257 704 ntTSL 3 BASIC21.91■■□□□ 1.12e-6■■■■□ 23
PABPN1Q86U42 EFEMP2-203ENST00000525392 519 ntTSL 221.88■■□□□ 1.092e-6■■■■□ 23
PABPN1Q86U42 EFEMP2-218ENST00000532084 571 ntTSL 320.11■□□□□ 0.812e-6■■■■□ 23
PABPN1Q86U42 UNC45A-202ENST00000418476 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.62e-6■■■■□ 23
PABPN1Q86U42 UNC45A-216ENST00000639885 3255 ntTSL 5 BASIC17.96■□□□□ 0.462e-6■■■■□ 23
PABPN1Q86U42 TRIP12-203ENST00000389044 6405 ntTSL 1 (best) BASIC16.65■□□□□ 0.262e-6■■■■□ 23
PABPN1Q86U42 UNC45A-201ENST00000394275 4002 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.242e-6■■■■□ 23
PABPN1Q86U42 ZNF83-211ENST00000597597 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.152e-6■■■■□ 23
PABPN1Q86U42 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC10.68□□□□□ -0.72e-6■■■■□ 23
PABPN1Q86U42 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.712e-6■■■■□ 23
PABPN1Q86U42 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.732e-6■■■■□ 23
PABPN1Q86U42 TRIP12-206ENST00000418123 562 ntTSL 49.96□□□□□ -0.822e-6■■■■□ 23
PABPN1Q86U42 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.912e-6■■■■□ 23
PABPN1Q86U42 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.932e-6■■■■□ 23
PABPN1Q86U42 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.012e-6■■■■□ 23
PABPN1Q86U42 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.42e-6■■■■□ 23
PABPN1Q86U42 CAPN12-207ENST00000597716 2198 ntTSL 232.31■■■□□ 2.763e-7■■■■□ 23
PABPN1Q86U42 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.233e-7■■■■□ 23
PABPN1Q86U42 CAPN12-202ENST00000593700 1118 ntTSL 1 (best)27.11■■□□□ 1.933e-7■■■■□ 23
PABPN1Q86U42 CHRD-207ENST00000459711 503 ntTSL 243.07■■■■■ 4.492e-7■■■■□ 22.9
PABPN1Q86U42 FANCA-216ENST00000564870 460 ntTSL 322.07■■□□□ 1.122e-7■■■■□ 22.9
PABPN1Q86U42 PTPRA-204ENST00000380393 3636 ntTSL 1 (best) BASIC14.32□□□□□ -0.121e-6■■■■□ 22.8
PABPN1Q86U42 SARS2-203ENST00000455102 1118 ntTSL 226.95■■□□□ 1.94e-6■■■■□ 22.8
PABPN1Q86U42 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC25.43■■□□□ 1.666e-7■■■■□ 22.8
PABPN1Q86U42 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC25.07■■□□□ 1.66e-7■■■■□ 22.8
PABPN1Q86U42 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.566e-7■■■■□ 22.8
PABPN1Q86U42 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC19.85■□□□□ 0.776e-7■■■■□ 22.8
PABPN1Q86U42 TUBGCP2-208ENST00000482278 3553 ntTSL 219.32■□□□□ 0.686e-7■■■■□ 22.8
PABPN1Q86U42 TUBGCP2-201ENST00000252936 3885 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.296e-7■■■■□ 22.8
PABPN1Q86U42 LMBR1L-229ENST00000553040 768 ntTSL 521.73■■□□□ 1.071e-9■■■■□ 22.8
PABPN1Q86U42 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.562e-8■■■■□ 22.7
PABPN1Q86U42 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.442e-8■■■■□ 22.7
PABPN1Q86U42 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.412e-8■■■■□ 22.7
PABPN1Q86U42 MCF2L-216ENST00000439475 453 ntTSL 520.76■□□□□ 0.913e-6■■■■□ 22.6
PABPN1Q86U42 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC42.98■■■■■ 4.472e-7■■■■□ 22.6
PABPN1Q86U42 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC42.37■■■■■ 4.372e-7■■■■□ 22.6
PABPN1Q86U42 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC41.06■■■■■ 4.162e-7■■■■□ 22.6
PABPN1Q86U42 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC40.97■■■■■ 4.152e-7■■■■□ 22.6
PABPN1Q86U42 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC40.41■■■■■ 4.062e-7■■■■□ 22.6
PABPN1Q86U42 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC38.92■■■■□ 3.822e-7■■■■□ 22.6
PABPN1Q86U42 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC36.27■■■■□ 3.42e-7■■■■□ 22.6
PABPN1Q86U42 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.772e-7■■■■□ 22.6
PABPN1Q86U42 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.582e-7■■■■□ 22.6
PABPN1Q86U42 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC30.97■■■□□ 2.552e-7■■■■□ 22.6
PABPN1Q86U42 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC29.1■■■□□ 2.252e-7■■■■□ 22.6
PABPN1Q86U42 IRF3-215ENST00000596822 823 ntTSL 3 BASIC28.93■■■□□ 2.222e-7■■■■□ 22.6
PABPN1Q86U42 IRF3-212ENST00000596756 931 ntTSL 528.6■■■□□ 2.172e-7■■■■□ 22.6
PABPN1Q86U42 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC26.24■■□□□ 1.792e-7■■■■□ 22.6
PABPN1Q86U42 IRF3-219ENST00000597636 2874 ntTSL 524.51■■□□□ 1.512e-7■■■■□ 22.6
PABPN1Q86U42 FANCA-229ENST00000567988 915 ntTSL 524.55■■□□□ 1.525e-8■■■■□ 22.6
Retrieved 100 of 8,254 protein–RNA pairs in 117 ms