RNA–Protein interactions for RNA: ENST00000488168.5

PNCK-230, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, humanhuman

TSL 3

Gene PNCK, Length 976 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNCK-230ENST00000488168 NISCHQ9Y2I1 1504 aa43.66■■■■■ 4.58
PNCK-230ENST00000488168 CCDC180Q9P1Z9 1646 aa39.14■■■■□ 3.86
PNCK-230ENST00000488168 ABCC9O60706 1549 aa38.94■■■■□ 3.82
PNCK-230ENST00000488168 RB1CC1Q8TDY2 1594 aa37.07■■■■□ 3.52
PNCK-230ENST00000488168 NACADO15069 1562 aa36.83■■■■□ 3.49
PNCK-230ENST00000488168 DCAF8L2P0C7V8 631 aa36.72■■■■□ 3.47
PNCK-230ENST00000488168 UNC13AQ9UPW8 1703 aa36.57■■■■□ 3.45
PNCK-230ENST00000488168 MYO15BQ96JP2 1530 aa36.29■■■■□ 3.4
PNCK-230ENST00000488168 DNAJC5BQ9UF47 199 aa36.29■■■■□ 3.4
PNCK-230ENST00000488168 ZCCHC6Q5VYS8 1495 aaKnown RBP36.26■■■■□ 3.4
PNCK-230ENST00000488168 PABPN1Q86U42 306 aaKnown RBP eCLIP36.24■■■■□ 3.392e-6■■■■□ 23
PNCK-230ENST00000488168 BICRAQ9NZM4 1560 aa36.12■■■■□ 3.37
PNCK-230ENST00000488168 DCAF1Q9Y4B6 1507 aa35.98■■■■□ 3.35
PNCK-230ENST00000488168 SCRIBQ14160 1630 aa35.79■■■■□ 3.32
PNCK-230ENST00000488168 SHROOM4Q9ULL8 1493 aa35.35■■■■□ 3.25
PNCK-230ENST00000488168 CC2D2AQ9P2K1 1620 aa35.21■■■■□ 3.23
PNCK-230ENST00000488168 EIF4G1Q04637 1599 aaKnown RBP35.15■■■■□ 3.22
PNCK-230ENST00000488168 CECR2Q9BXF3 1484 aa34.96■■■■□ 3.19
PNCK-230ENST00000488168 SMARCA4P51532 1647 aa34.09■■■■□ 3.05
PNCK-230ENST00000488168 ATAD2BQ9ULI0 1458 aa33.96■■■■□ 3.03
PNCK-230ENST00000488168 NCAPD3P42695 1498 aa33.95■■■■□ 3.02
PNCK-230ENST00000488168 SMARCA2P51531 1590 aa33.85■■■■□ 3.01
PNCK-230ENST00000488168 BAZ1AQ9NRL2 1556 aaPredicted RBP33.85■■■■□ 3.01
PNCK-230ENST00000488168 HMGXB3Q12766 1538 aa33.79■■■■□ 3
PNCK-230ENST00000488168 MROH2BQ7Z745 1585 aa33.73■■■□□ 2.99
PNCK-230ENST00000488168 PEG3Q9GZU2 1588 aa33.66■■■□□ 2.98
PNCK-230ENST00000488168 BAZ1BQ9UIG0 1483 aaKnown RBP33.65■■■□□ 2.98
PNCK-230ENST00000488168 NESP48681 1621 aa33.57■■■□□ 2.96
PNCK-230ENST00000488168 ERCC6Q03468 1493 aa33.5■■■□□ 2.95
PNCK-230ENST00000488168 WIZO95785 1651 aa33.44■■■□□ 2.94
PNCK-230ENST00000488168 CUX2O14529 1486 aa33.3■■■□□ 2.92
PNCK-230ENST00000488168 KIF21AQ7Z4S6 1674 aa33.25■■■□□ 2.91
PNCK-230ENST00000488168 LAMC3Q9Y6N6 1575 aa33.23■■■□□ 2.91
PNCK-230ENST00000488168 THOC2Q8NI27 1593 aaKnown RBP33.19■■■□□ 2.9
PNCK-230ENST00000488168 RSF1Q96T23 1441 aaPredicted RBP33.02■■■□□ 2.88
PNCK-230ENST00000488168 DNAJC5Q9H3Z4 198 aa32.98■■■□□ 2.87
PNCK-230ENST00000488168 CADPSQ9ULU8 1353 aa32.93■■■□□ 2.86
PNCK-230ENST00000488168 PDS5BQ9NTI5 1447 aa32.92■■■□□ 2.86
PNCK-230ENST00000488168 TOP2AP11388 1531 aaKnown RBP32.88■■■□□ 2.85
PNCK-230ENST00000488168 MRC2Q9UBG0 1479 aa32.73■■■□□ 2.83
PNCK-230ENST00000488168 WDR62O43379 1518 aa32.68■■■□□ 2.82
PNCK-230ENST00000488168 CEP164Q9UPV0 1460 aa32.65■■■□□ 2.82
PNCK-230ENST00000488168 CFTRP13569 1480 aa32.64■■■□□ 2.82
PNCK-230ENST00000488168 FANCD2Q9BXW9 1451 aa32.64■■■□□ 2.82
PNCK-230ENST00000488168 PRDM2Q13029 1718 aa32.62■■■□□ 2.81
PNCK-230ENST00000488168 CCDC88BA6NC98 1476 aa32.5■■■□□ 2.79
PNCK-230ENST00000488168 URB2Q14146 1524 aaKnown RBP32.44■■■□□ 2.78
PNCK-230ENST00000488168 TOPBP1Q92547 1522 aa32.09■■■□□ 2.73
PNCK-230ENST00000488168 ZNF608Q9ULD9 1512 aaPredicted RBP32.02■■■□□ 2.72
PNCK-230ENST00000488168 DNMBPQ6XZF7 1577 aa32■■■□□ 2.71
PNCK-230ENST00000488168 IFT140Q96RY7 1462 aa31.93■■■□□ 2.7
PNCK-230ENST00000488168 EIF4G3O43432 1585 aaKnown RBP31.9■■■□□ 2.7
PNCK-230ENST00000488168 TARBP1Q13395 1621 aaKnown RBP31.86■■■□□ 2.69
PNCK-230ENST00000488168 ABCC8Q09428 1581 aa31.85■■■□□ 2.69
PNCK-230ENST00000488168 TRIM41Q8WV44 630 aa31.77■■■□□ 2.68
PNCK-230ENST00000488168 POLA1P09884 1462 aaPredicted RBP31.77■■■□□ 2.68
PNCK-230ENST00000488168 SUPT5HO00267 1087 aaKnown RBP31.76■■■□□ 2.67
PNCK-230ENST00000488168 OSCARQ8IYS5 282 aa31.74■■■□□ 2.67
PNCK-230ENST00000488168 CHD1O14646 1710 aa31.72■■■□□ 2.67
PNCK-230ENST00000488168 RAD54L2Q9Y4B4 1467 aa31.71■■■□□ 2.67
PNCK-230ENST00000488168 AQRO60306 1485 aaKnown RBP eCLIP31.7■■■□□ 2.665e-8■■■■■ 27.6
PNCK-230ENST00000488168 CUX1P39880 1505 aa31.69■■■□□ 2.66
PNCK-230ENST00000488168 FGD5Q6ZNL6 1462 aa31.63■■■□□ 2.65
PNCK-230ENST00000488168 RIMBP3CA6NJZ7 1639 aa31.59■■■□□ 2.65
PNCK-230ENST00000488168 RIMBP3BA6NNM3 1639 aa31.59■■■□□ 2.65
PNCK-230ENST00000488168 RIMBP3Q9UFD9 1639 aa31.59■■■□□ 2.65
PNCK-230ENST00000488168 SOGA1O94964 1423 aa31.55■■■□□ 2.64
PNCK-230ENST00000488168 WDR97A6NE52 1622 aa31.53■■■□□ 2.64
PNCK-230ENST00000488168 TDRD9Q8NDG6 1382 aaKnown RBP31.51■■■□□ 2.63
PNCK-230ENST00000488168 ARHGEF11O15085 1522 aa31.43■■■□□ 2.62
PNCK-230ENST00000488168 PBRM1Q86U86 1689 aa31.41■■■□□ 2.62
PNCK-230ENST00000488168 SNAPC4Q5SXM2 1469 aa31.4■■■□□ 2.62
PNCK-230ENST00000488168 FBLN2P98095 1184 aa31.37■■■□□ 2.61
PNCK-230ENST00000488168 ABCA5Q8WWZ7 1642 aa31.27■■■□□ 2.6
PNCK-230ENST00000488168 SYNJ1O43426 1573 aa31.27■■■□□ 2.6
PNCK-230ENST00000488168 BIVM-ERCC5R4GMW8 1640 aa31.27■■■□□ 2.6
PNCK-230ENST00000488168 GRIN2BQ13224 1484 aa31.25■■■□□ 2.59
PNCK-230ENST00000488168 MAGI1Q96QZ7 1491 aaPredicted RBP31.22■■■□□ 2.59
PNCK-230ENST00000488168 ABCA10Q8WWZ4 1543 aa31.21■■■□□ 2.59
PNCK-230ENST00000488168 GAPVD1Q14C86 1478 aa31.21■■■□□ 2.59
PNCK-230ENST00000488168 TOP2BQ02880 1626 aa31.2■■■□□ 2.58
PNCK-230ENST00000488168 CLASP1Q7Z460 1538 aa31.19■■■□□ 2.58
PNCK-230ENST00000488168 ARAP1Q96P48 1450 aa31.15■■■□□ 2.58
PNCK-230ENST00000488168 SYNJ2O15056 1496 aa31.13■■■□□ 2.57
PNCK-230ENST00000488168 WRNQ14191 1432 aaPredicted RBP eCLIP31.12■■■□□ 2.57
PNCK-230ENST00000488168 CHMP7Q8WUX9 453 aaPredicted RBP31.1■■■□□ 2.57
PNCK-230ENST00000488168 CYB5RLQ6IPT4 315 aa31.09■■■□□ 2.57
PNCK-230ENST00000488168 ADAMTS12P58397 1594 aa31.01■■■□□ 2.56
PNCK-230ENST00000488168 GRIN2AQ12879 1464 aa30.9■■■□□ 2.54
PNCK-230ENST00000488168 CEP170Q5SW79 1584 aa30.89■■■□□ 2.54
PNCK-230ENST00000488168 ERCC6L2Q5T890 1561 aa30.85■■■□□ 2.53
PNCK-230ENST00000488168 ERICH3Q5RHP9 1530 aa30.82■■■□□ 2.52
PNCK-230ENST00000488168 FHAD1B1AJZ9 1412 aa30.77■■■□□ 2.52
PNCK-230ENST00000488168 NUP160Q12769 1436 aa30.75■■■□□ 2.51
PNCK-230ENST00000488168 SHROOM2Q13796 1616 aa30.7■■■□□ 2.51
PNCK-230ENST00000488168 TRHP20396 242 aaPredicted RBP30.65■■■□□ 2.5
PNCK-230ENST00000488168 RUSC2Q8N2Y8 1516 aa30.58■■■□□ 2.49
PNCK-230ENST00000488168 CUL7Q14999 1698 aa30.49■■■□□ 2.47
PNCK-230ENST00000488168 KIF27Q86VH2 1401 aa30.46■■■□□ 2.47
PNCK-230ENST00000488168 PRG4Q92954 1404 aaPredicted RBP30.45■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms