RNA–Protein interactions for RNA: ENST00000534352.1

NDUFV1-228, Transcript of NADH:ubiquinone oxidoreductase core subunit V1, humanhuman

TSL 2

Gene NDUFV1, Length 573 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFV1-228ENST00000534352 NISCHQ9Y2I1 1504 aa47.56■■■■■ 5.2
NDUFV1-228ENST00000534352 CCDC180Q9P1Z9 1646 aa42.75■■■■■ 4.43
NDUFV1-228ENST00000534352 ABCC9O60706 1549 aa42.75■■■■■ 4.43
NDUFV1-228ENST00000534352 RB1CC1Q8TDY2 1594 aa40.69■■■■■ 4.11
NDUFV1-228ENST00000534352 NACADO15069 1562 aa40.44■■■■■ 4.06
NDUFV1-228ENST00000534352 DNAJC5BQ9UF47 199 aa40.36■■■■■ 4.05
NDUFV1-228ENST00000534352 MYO15BQ96JP2 1530 aa39.94■■■■□ 3.98
NDUFV1-228ENST00000534352 UNC13AQ9UPW8 1703 aa39.89■■■■□ 3.98
NDUFV1-228ENST00000534352 DCAF8L2P0C7V8 631 aa39.88■■■■□ 3.97
NDUFV1-228ENST00000534352 PABPN1Q86U42 306 aaKnown RBP eCLIP39.75■■■■□ 3.958e-7■■■■□ 23.2
NDUFV1-228ENST00000534352 BICRAQ9NZM4 1560 aa39.64■■■■□ 3.94
NDUFV1-228ENST00000534352 ZCCHC6Q5VYS8 1495 aaKnown RBP39.4■■■■□ 3.9
NDUFV1-228ENST00000534352 DCAF1Q9Y4B6 1507 aa39.35■■■■□ 3.89
NDUFV1-228ENST00000534352 SHROOM4Q9ULL8 1493 aa39.07■■■■□ 3.85
NDUFV1-228ENST00000534352 SCRIBQ14160 1630 aa38.81■■■■□ 3.8
NDUFV1-228ENST00000534352 CC2D2AQ9P2K1 1620 aa38.7■■■■□ 3.79
NDUFV1-228ENST00000534352 EIF4G1Q04637 1599 aaKnown RBP38.6■■■■□ 3.77
NDUFV1-228ENST00000534352 CECR2Q9BXF3 1484 aa38.56■■■■□ 3.76
NDUFV1-228ENST00000534352 NCAPD3P42695 1498 aa37.37■■■■□ 3.57
NDUFV1-228ENST00000534352 ATAD2BQ9ULI0 1458 aa37.2■■■■□ 3.54
NDUFV1-228ENST00000534352 DNAJC5Q9H3Z4 198 aa37.13■■■■□ 3.53
NDUFV1-228ENST00000534352 SMARCA4P51532 1647 aa37.11■■■■□ 3.53
NDUFV1-228ENST00000534352 HMGXB3Q12766 1538 aa37.05■■■■□ 3.52
NDUFV1-228ENST00000534352 SMARCA2P51531 1590 aa37.04■■■■□ 3.52
NDUFV1-228ENST00000534352 CUX2O14529 1486 aa36.98■■■■□ 3.51
NDUFV1-228ENST00000534352 BAZ1AQ9NRL2 1556 aaPredicted RBP36.88■■■■□ 3.49
NDUFV1-228ENST00000534352 PEG3Q9GZU2 1588 aa36.86■■■■□ 3.49
NDUFV1-228ENST00000534352 ERCC6Q03468 1493 aa36.85■■■■□ 3.49
NDUFV1-228ENST00000534352 NESP48681 1621 aa36.74■■■■□ 3.47
NDUFV1-228ENST00000534352 BAZ1BQ9UIG0 1483 aaKnown RBP36.74■■■■□ 3.47
NDUFV1-228ENST00000534352 MROH2BQ7Z745 1585 aa36.63■■■■□ 3.45
NDUFV1-228ENST00000534352 LAMC3Q9Y6N6 1575 aa36.49■■■■□ 3.43
NDUFV1-228ENST00000534352 THOC2Q8NI27 1593 aaKnown RBP36.46■■■■□ 3.43
NDUFV1-228ENST00000534352 KIF21AQ7Z4S6 1674 aa36.29■■■■□ 3.4
NDUFV1-228ENST00000534352 PDS5BQ9NTI5 1447 aa36.22■■■■□ 3.39
NDUFV1-228ENST00000534352 CADPSQ9ULU8 1353 aa36.16■■■■□ 3.38
NDUFV1-228ENST00000534352 WIZO95785 1651 aa36.16■■■■□ 3.38
NDUFV1-228ENST00000534352 MRC2Q9UBG0 1479 aa35.94■■■■□ 3.34
NDUFV1-228ENST00000534352 WDR62O43379 1518 aa35.93■■■■□ 3.34
NDUFV1-228ENST00000534352 RSF1Q96T23 1441 aaPredicted RBP35.83■■■■□ 3.33
NDUFV1-228ENST00000534352 CFTRP13569 1480 aa35.77■■■■□ 3.32
NDUFV1-228ENST00000534352 CEP164Q9UPV0 1460 aa35.74■■■■□ 3.31
NDUFV1-228ENST00000534352 FANCD2Q9BXW9 1451 aa35.72■■■■□ 3.31
NDUFV1-228ENST00000534352 TOP2AP11388 1531 aaKnown RBP35.69■■■■□ 3.3
NDUFV1-228ENST00000534352 URB2Q14146 1524 aaKnown RBP35.48■■■■□ 3.27
NDUFV1-228ENST00000534352 PRDM2Q13029 1718 aa35.4■■■■□ 3.26
NDUFV1-228ENST00000534352 CCDC88BA6NC98 1476 aa35.29■■■■□ 3.24
NDUFV1-228ENST00000534352 TRIM41Q8WV44 630 aa35.22■■■■□ 3.23
NDUFV1-228ENST00000534352 OSCARQ8IYS5 282 aa35.19■■■■□ 3.22
NDUFV1-228ENST00000534352 IFT140Q96RY7 1462 aa35.07■■■■□ 3.2
NDUFV1-228ENST00000534352 TOPBP1Q92547 1522 aa35.06■■■■□ 3.2
NDUFV1-228ENST00000534352 ZNF608Q9ULD9 1512 aaPredicted RBP35.05■■■■□ 3.2
NDUFV1-228ENST00000534352 ABCC8Q09428 1581 aa34.96■■■■□ 3.19
NDUFV1-228ENST00000534352 DNMBPQ6XZF7 1577 aa34.91■■■■□ 3.18
NDUFV1-228ENST00000534352 EIF4G3O43432 1585 aaKnown RBP34.83■■■■□ 3.17
NDUFV1-228ENST00000534352 TARBP1Q13395 1621 aaKnown RBP34.82■■■■□ 3.16
NDUFV1-228ENST00000534352 RIMBP3CA6NJZ7 1639 aa34.81■■■■□ 3.16
NDUFV1-228ENST00000534352 RIMBP3BA6NNM3 1639 aa34.81■■■■□ 3.16
NDUFV1-228ENST00000534352 RIMBP3Q9UFD9 1639 aa34.81■■■■□ 3.16
NDUFV1-228ENST00000534352 POLA1P09884 1462 aaPredicted RBP34.7■■■■□ 3.15
NDUFV1-228ENST00000534352 ARHGEF11O15085 1522 aa34.7■■■■□ 3.14
NDUFV1-228ENST00000534352 AQRO60306 1485 aaKnown RBP eCLIP34.67■■■■□ 3.143e-6■□□□□ 10.3
NDUFV1-228ENST00000534352 CHD1O14646 1710 aa34.61■■■■□ 3.13
NDUFV1-228ENST00000534352 RAD54L2Q9Y4B4 1467 aa34.53■■■■□ 3.12
NDUFV1-228ENST00000534352 SOGA1O94964 1423 aa34.47■■■■□ 3.11
NDUFV1-228ENST00000534352 WDR97A6NE52 1622 aa34.44■■■■□ 3.1
NDUFV1-228ENST00000534352 CUX1P39880 1505 aa34.42■■■■□ 3.1
NDUFV1-228ENST00000534352 FGD5Q6ZNL6 1462 aa34.42■■■■□ 3.1
NDUFV1-228ENST00000534352 TDRD9Q8NDG6 1382 aaKnown RBP34.41■■■■□ 3.1
NDUFV1-228ENST00000534352 ARAP1Q96P48 1450 aa34.36■■■■□ 3.09
NDUFV1-228ENST00000534352 CYB5RLQ6IPT4 315 aa34.33■■■■□ 3.09
NDUFV1-228ENST00000534352 SNAPC4Q5SXM2 1469 aa34.3■■■■□ 3.08
NDUFV1-228ENST00000534352 FBLN2P98095 1184 aa34.29■■■■□ 3.08
NDUFV1-228ENST00000534352 CLASP1Q7Z460 1538 aa34.27■■■■□ 3.08
NDUFV1-228ENST00000534352 MAGI1Q96QZ7 1491 aaPredicted RBP34.25■■■■□ 3.07
NDUFV1-228ENST00000534352 GRIN2BQ13224 1484 aa34.21■■■■□ 3.07
NDUFV1-228ENST00000534352 SYNJ2O15056 1496 aa34.14■■■■□ 3.06
NDUFV1-228ENST00000534352 SYNJ1O43426 1573 aa34.13■■■■□ 3.05
NDUFV1-228ENST00000534352 CHMP7Q8WUX9 453 aaPredicted RBP34.1■■■■□ 3.05
NDUFV1-228ENST00000534352 PBRM1Q86U86 1689 aa34.09■■■■□ 3.05
NDUFV1-228ENST00000534352 ABCA10Q8WWZ4 1543 aa34.08■■■■□ 3.05
NDUFV1-228ENST00000534352 GAPVD1Q14C86 1478 aa34.07■■■■□ 3.05
NDUFV1-228ENST00000534352 ABCA5Q8WWZ7 1642 aa34.05■■■■□ 3.04
NDUFV1-228ENST00000534352 SUPT5HO00267 1087 aaKnown RBP33.89■■■■□ 3.02
NDUFV1-228ENST00000534352 TRHP20396 242 aaPredicted RBP33.88■■■■□ 3.01
NDUFV1-228ENST00000534352 BIVM-ERCC5R4GMW8 1640 aa33.86■■■■□ 3.01
NDUFV1-228ENST00000534352 TOP2BQ02880 1626 aa33.83■■■■□ 3.01
NDUFV1-228ENST00000534352 WRNQ14191 1432 aaPredicted RBP eCLIP33.83■■■■□ 3.01
NDUFV1-228ENST00000534352 GRIN2AQ12879 1464 aa33.79■■■■□ 3
NDUFV1-228ENST00000534352 ADAMTS12P58397 1594 aa33.77■■■■□ 3
NDUFV1-228ENST00000534352 NUP160Q12769 1436 aa33.75■■■□□ 2.99
NDUFV1-228ENST00000534352 CEP170Q5SW79 1584 aa33.7■■■□□ 2.99
NDUFV1-228ENST00000534352 ERCC6L2Q5T890 1561 aa33.69■■■□□ 2.98
NDUFV1-228ENST00000534352 ERICH3Q5RHP9 1530 aa33.64■■■□□ 2.98
NDUFV1-228ENST00000534352 FHAD1B1AJZ9 1412 aa33.64■■■□□ 2.98
NDUFV1-228ENST00000534352 SHROOM2Q13796 1616 aa33.64■■■□□ 2.98
NDUFV1-228ENST00000534352 PRG4Q92954 1404 aaPredicted RBP33.32■■■□□ 2.92
NDUFV1-228ENST00000534352 RUSC2Q8N2Y8 1516 aa33.3■■■□□ 2.92
NDUFV1-228ENST00000534352 JPH4Q96JJ6 628 aa33.3■■■□□ 2.92
NDUFV1-228ENST00000534352 KIF13AQ9H1H9 1805 aa33.24■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms