RNA–Protein interactions for RNA: ENST00000512140.5

BRD8-224, Transcript of bromodomain containing 8, humanhuman

TSL 2

Gene BRD8, Length 2,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD8-224ENST00000512140 NISCHQ9Y2I1 1504 aa14□□□□□ -0.17
BRD8-224ENST00000512140 SHROOM4Q9ULL8 1493 aa12.46□□□□□ -0.41
BRD8-224ENST00000512140 SUPT5HO00267 1087 aaKnown RBP12.4□□□□□ -0.42
BRD8-224ENST00000512140 HRCP23327 699 aa12.27□□□□□ -0.45
BRD8-224ENST00000512140 PCGF6Q9BYE7 350 aa12.16□□□□□ -0.46
BRD8-224ENST00000512140 MYO15BQ96JP2 1530 aa12.1□□□□□ -0.47
BRD8-224ENST00000512140 CHIC1Q5VXU3 224 aa12.1□□□□□ -0.47
BRD8-224ENST00000512140 PPARGC1BQ86YN6 1023 aaKnown RBP12.1□□□□□ -0.47
BRD8-224ENST00000512140 DCAF8L2P0C7V8 631 aa11.89□□□□□ -0.51
BRD8-224ENST00000512140 ZCCHC6Q5VYS8 1495 aaKnown RBP11.87□□□□□ -0.51
BRD8-224ENST00000512140 LOC105371045A0A1W2PR82 267 aa11.87□□□□□ -0.51
BRD8-224ENST00000512140 DCAF1Q9Y4B6 1507 aa11.75□□□□□ -0.53
BRD8-224ENST00000512140 TRIM26Q12899 539 aaPredicted RBP11.73□□□□□ -0.53
BRD8-224ENST00000512140 CCDC180Q9P1Z9 1646 aa11.59□□□□□ -0.55
BRD8-224ENST00000512140 PELP1Q8IZL8 1130 aaKnown RBP11.58□□□□□ -0.56
BRD8-224ENST00000512140 SCAF1Q9H7N4 1312 aaKnown RBP11.56□□□□□ -0.56
BRD8-224ENST00000512140 ZEB1P37275 1124 aaPredicted RBP11.55□□□□□ -0.56
BRD8-224ENST00000512140 FAM9AQ8IZU1 332 aaPredicted RBP11.49□□□□□ -0.57
BRD8-224ENST00000512140 EHMT2Q96KQ7 1210 aa11.48□□□□□ -0.57
BRD8-224ENST00000512140 TRIM41Q8WV44 630 aa11.44□□□□□ -0.58
BRD8-224ENST00000512140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.31□□□□□ -0.6
BRD8-224ENST00000512140 NEUROD1Q13562 356 aa11.31□□□□□ -0.6
BRD8-224ENST00000512140 ACIN1Q9UKV3 1341 aaKnown RBP11.3□□□□□ -0.6
BRD8-224ENST00000512140 RSF1Q96T23 1441 aaPredicted RBP11.28□□□□□ -0.6
BRD8-224ENST00000512140 CCER1Q8TC90 406 aaPredicted RBP11.27□□□□□ -0.61
BRD8-224ENST00000512140 GTF3C3Q9Y5Q9 886 aa11.24□□□□□ -0.61
BRD8-224ENST00000512140 ABCC9O60706 1549 aa11.23□□□□□ -0.61
BRD8-224ENST00000512140 DIEXFQ68CQ4 756 aaKnown RBP11.21□□□□□ -0.62
BRD8-224ENST00000512140 RB1CC1Q8TDY2 1594 aa11.19□□□□□ -0.62
BRD8-224ENST00000512140 CENPBP07199 599 aaPredicted RBP11.17□□□□□ -0.62
BRD8-224ENST00000512140 TTBK1Q5TCY1 1321 aaPredicted RBP11.17□□□□□ -0.62
BRD8-224ENST00000512140 SCRIBQ14160 1630 aa11.13□□□□□ -0.63
BRD8-224ENST00000512140 MYT1Q01538 1121 aa11.06□□□□□ -0.64
BRD8-224ENST00000512140 YTHDC1Q96MU7 727 aaKnown RBP11.06□□□□□ -0.64
BRD8-224ENST00000512140 CECR2Q9BXF3 1484 aa11.01□□□□□ -0.65
BRD8-224ENST00000512140 ZNF316A6NFI3 1004 aaPredicted RBP10.99□□□□□ -0.65
BRD8-224ENST00000512140 MROH2BQ7Z745 1585 aa10.96□□□□□ -0.65
BRD8-224ENST00000512140 MIER1Q8N108 512 aa10.94□□□□□ -0.66
BRD8-224ENST00000512140 WIZO95785 1651 aa10.91□□□□□ -0.66
BRD8-224ENST00000512140 CEP162Q5TB80 1403 aa10.89□□□□□ -0.67
BRD8-224ENST00000512140 UBTFP17480 764 aaKnown RBP10.89□□□□□ -0.67
BRD8-224ENST00000512140 WRNQ14191 1432 aaPredicted RBP eCLIP10.88□□□□□ -0.67
BRD8-224ENST00000512140 HNRNPUL2Q1KMD3 747 aaKnown RBP10.88□□□□□ -0.67
BRD8-224ENST00000512140 CCDC88BA6NC98 1476 aa10.86□□□□□ -0.67
BRD8-224ENST00000512140 ABCC8Q09428 1581 aa10.84□□□□□ -0.67
BRD8-224ENST00000512140 SOGA1O94964 1423 aa10.84□□□□□ -0.67
BRD8-224ENST00000512140 CSRNP3Q8WYN3 585 aa10.82□□□□□ -0.68
BRD8-224ENST00000512140 TNIKQ9UKE5 1360 aa10.82□□□□□ -0.68
BRD8-224ENST00000512140 RUSC2Q8N2Y8 1516 aa10.77□□□□□ -0.68
BRD8-224ENST00000512140 EIF4G1Q04637 1599 aaKnown RBP10.77□□□□□ -0.69
BRD8-224ENST00000512140 BAZ1AQ9NRL2 1556 aaPredicted RBP10.76□□□□□ -0.69
BRD8-224ENST00000512140 RANGAP1P46060 587 aaPredicted RBP10.72□□□□□ -0.69
BRD8-224ENST00000512140 NACADO15069 1562 aa10.72□□□□□ -0.69
BRD8-224ENST00000512140 SUPT16HQ9Y5B9 1047 aaKnown RBP10.7□□□□□ -0.7
BRD8-224ENST00000512140 APLP2Q06481 763 aa10.69□□□□□ -0.7
BRD8-224ENST00000512140 GOLGA3Q08378 1498 aa10.68□□□□□ -0.7
BRD8-224ENST00000512140 EEA1Q15075 1411 aa10.67□□□□□ -0.7
BRD8-224ENST00000512140 TOP2AP11388 1531 aaKnown RBP10.65□□□□□ -0.7
BRD8-224ENST00000512140 SMARCA2P51531 1590 aa10.64□□□□□ -0.71
BRD8-224ENST00000512140 CLIP1P30622 1438 aa10.63□□□□□ -0.71
BRD8-224ENST00000512140 TSHZ2Q9NRE2 1034 aa10.62□□□□□ -0.71
BRD8-224ENST00000512140 CLSPNQ9HAW4 1339 aa10.59□□□□□ -0.71
BRD8-224ENST00000512140 VPS8Q8N3P4 1428 aa10.58□□□□□ -0.72
BRD8-224ENST00000512140 CEP164Q9UPV0 1460 aa10.57□□□□□ -0.72
BRD8-224ENST00000512140 SMARCA4P51532 1647 aa10.57□□□□□ -0.72
BRD8-224ENST00000512140 KCNH8Q96L42 1107 aa10.57□□□□□ -0.72
BRD8-224ENST00000512140 ANP32EQ9BTT0 268 aa10.56□□□□□ -0.72
BRD8-224ENST00000512140 DHX57Q6P158 1386 aaKnown RBP10.56□□□□□ -0.72
BRD8-224ENST00000512140 BCANQ96GW7 911 aa10.56□□□□□ -0.72
BRD8-224ENST00000512140 RAPGEF2Q9Y4G8 1499 aa10.52□□□□□ -0.72
BRD8-224ENST00000512140 KANK4Q5T7N3 995 aaPredicted RBP10.51□□□□□ -0.73
BRD8-224ENST00000512140 ITGAEP38570 1179 aa10.5□□□□□ -0.73
BRD8-224ENST00000512140 KIF21BO75037 1637 aa10.48□□□□□ -0.73
BRD8-224ENST00000512140 SYNJ1O43426 1573 aa10.48□□□□□ -0.73
BRD8-224ENST00000512140 FKBP8Q14318 412 aa10.48□□□□□ -0.73
BRD8-224ENST00000512140 PABPN1Q86U42 306 aaKnown RBP eCLIP10.48□□□□□ -0.733e-6■■■■□ 23.3
BRD8-224ENST00000512140 UNC13AQ9UPW8 1703 aa10.48□□□□□ -0.73
BRD8-224ENST00000512140 BCL11AQ9H165 835 aa10.47□□□□□ -0.73
BRD8-224ENST00000512140 BAZ1BQ9UIG0 1483 aaKnown RBP10.44□□□□□ -0.74
BRD8-224ENST00000512140 DDX10Q13206 875 aaKnown RBP10.44□□□□□ -0.74
BRD8-224ENST00000512140 BICRAQ9NZM4 1560 aa10.42□□□□□ -0.74
BRD8-224ENST00000512140 RBM19Q9Y4C8 960 aaKnown RBP10.4□□□□□ -0.74
BRD8-224ENST00000512140 TRIM52Q96A61 297 aa10.39□□□□□ -0.75
BRD8-224ENST00000512140 HIRIP3Q9BW71 556 aaPredicted RBP10.39□□□□□ -0.75
BRD8-224ENST00000512140 NEFLP07196 543 aa10.37□□□□□ -0.75
BRD8-224ENST00000512140 SIN3AQ96ST3 1273 aa10.37□□□□□ -0.75
BRD8-224ENST00000512140 CCNB3Q8WWL7 1395 aa10.37□□□□□ -0.75
BRD8-224ENST00000512140 ARAP1Q96P48 1450 aa10.37□□□□□ -0.75
BRD8-224ENST00000512140 RRBP1Q9P2E9 1410 aaKnown RBP10.36□□□□□ -0.75
BRD8-224ENST00000512140 RAB3GAP2Q9H2M9 1393 aa10.35□□□□□ -0.75
BRD8-224ENST00000512140 PPP1R15AO75807 674 aaPredicted RBP10.31□□□□□ -0.76
BRD8-224ENST00000512140 PRXQ9BXM0 1461 aa10.3□□□□□ -0.76
BRD8-224ENST00000512140 CUX2O14529 1486 aa10.3□□□□□ -0.76
BRD8-224ENST00000512140 MAPKBP1O60336 1514 aa10.29□□□□□ -0.76
BRD8-224ENST00000512140 ANP32CO43423 234 aa10.29□□□□□ -0.76
BRD8-224ENST00000512140 WDR97A6NE52 1622 aa10.29□□□□□ -0.76
BRD8-224ENST00000512140 MSH5O43196 834 aa10.28□□□□□ -0.76
BRD8-224ENST00000512140 FAM50AQ14320 339 aaKnown RBP10.28□□□□□ -0.76
BRD8-224ENST00000512140 ATAD2BQ9ULI0 1458 aa10.28□□□□□ -0.76
BRD8-224ENST00000512140 PEG3Q9GZU2 1588 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms