RNA–Protein interactions for RNA: ENST00000340258.9

RASSF4-201, Transcript of Ras association domain family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RASSF4, Length 3,641 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASSF4-201ENST00000340258 NISCHQ9Y2I1 1504 aa19.28■□□□□ 0.68
RASSF4-201ENST00000340258 SHROOM4Q9ULL8 1493 aa17.09■□□□□ 0.33
RASSF4-201ENST00000340258 SUPT5HO00267 1087 aaKnown RBP17.01■□□□□ 0.31
RASSF4-201ENST00000340258 DCAF8L2P0C7V8 631 aa16.66■□□□□ 0.26
RASSF4-201ENST00000340258 CCDC180Q9P1Z9 1646 aa16.62■□□□□ 0.25
RASSF4-201ENST00000340258 PCGF6Q9BYE7 350 aa16.57■□□□□ 0.24
RASSF4-201ENST00000340258 HRCP23327 699 aa16.52■□□□□ 0.24
RASSF4-201ENST00000340258 PPARGC1BQ86YN6 1023 aaKnown RBP16.43■□□□□ 0.22
RASSF4-201ENST00000340258 CHIC1Q5VXU3 224 aa16.34■□□□□ 0.21
RASSF4-201ENST00000340258 MYO15BQ96JP2 1530 aa16.25■□□□□ 0.19
RASSF4-201ENST00000340258 ZCCHC6Q5VYS8 1495 aaKnown RBP16.19■□□□□ 0.18
RASSF4-201ENST00000340258 LOC105371045A0A1W2PR82 267 aa16.16■□□□□ 0.18
RASSF4-201ENST00000340258 EHMT2Q96KQ7 1210 aa15.96■□□□□ 0.15
RASSF4-201ENST00000340258 ABCC9O60706 1549 aa15.93■□□□□ 0.14
RASSF4-201ENST00000340258 TRIM26Q12899 539 aaPredicted RBP15.87■□□□□ 0.13
RASSF4-201ENST00000340258 FAM9AQ8IZU1 332 aaPredicted RBP15.83■□□□□ 0.12
RASSF4-201ENST00000340258 DCAF1Q9Y4B6 1507 aa15.81■□□□□ 0.12
RASSF4-201ENST00000340258 TRIM41Q8WV44 630 aa15.63■□□□□ 0.09
RASSF4-201ENST00000340258 ZEB1P37275 1124 aaPredicted RBP15.62■□□□□ 0.09
RASSF4-201ENST00000340258 SCAF1Q9H7N4 1312 aaKnown RBP15.57■□□□□ 0.08
RASSF4-201ENST00000340258 PELP1Q8IZL8 1130 aaKnown RBP15.57■□□□□ 0.08
RASSF4-201ENST00000340258 NACADO15069 1562 aa15.53■□□□□ 0.08
RASSF4-201ENST00000340258 SCRIBQ14160 1630 aa15.53■□□□□ 0.08
RASSF4-201ENST00000340258 TTBK1Q5TCY1 1321 aaPredicted RBP15.49■□□□□ 0.07
RASSF4-201ENST00000340258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.42■□□□□ 0.06
RASSF4-201ENST00000340258 CCER1Q8TC90 406 aaPredicted RBP15.41■□□□□ 0.06
RASSF4-201ENST00000340258 RB1CC1Q8TDY2 1594 aa15.41■□□□□ 0.06
RASSF4-201ENST00000340258 NEUROD1Q13562 356 aa15.28■□□□□ 0.04
RASSF4-201ENST00000340258 GTF3C3Q9Y5Q9 886 aa15.25■□□□□ 0.03
RASSF4-201ENST00000340258 ACIN1Q9UKV3 1341 aaKnown RBP15.25■□□□□ 0.03
RASSF4-201ENST00000340258 DIEXFQ68CQ4 756 aaKnown RBP15.22■□□□□ 0.03
RASSF4-201ENST00000340258 CENPBP07199 599 aaPredicted RBP15.21■□□□□ 0.03
RASSF4-201ENST00000340258 YTHDC1Q96MU7 727 aaKnown RBP15.21■□□□□ 0.03
RASSF4-201ENST00000340258 RSF1Q96T23 1441 aaPredicted RBP15.16■□□□□ 0.02
RASSF4-201ENST00000340258 PABPN1Q86U42 306 aaKnown RBP eCLIP15.15■□□□□ 0.024e-6■■■■□ 23.2
RASSF4-201ENST00000340258 CECR2Q9BXF3 1484 aa15.08■□□□□ 0
RASSF4-201ENST00000340258 UNC13AQ9UPW8 1703 aa15.07■□□□□ 0
RASSF4-201ENST00000340258 MROH2BQ7Z745 1585 aa14.96□□□□□ -0.01
RASSF4-201ENST00000340258 UBTFP17480 764 aaKnown RBP14.96□□□□□ -0.01
RASSF4-201ENST00000340258 BICRAQ9NZM4 1560 aa14.94□□□□□ -0.02
RASSF4-201ENST00000340258 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
RASSF4-201ENST00000340258 RANGAP1P46060 587 aaPredicted RBP14.9□□□□□ -0.02
RASSF4-201ENST00000340258 ZNF316A6NFI3 1004 aaPredicted RBP14.89□□□□□ -0.03
RASSF4-201ENST00000340258 BAZ1AQ9NRL2 1556 aaPredicted RBP14.87□□□□□ -0.03
RASSF4-201ENST00000340258 MYT1Q01538 1121 aa14.85□□□□□ -0.03
RASSF4-201ENST00000340258 WIZO95785 1651 aa14.84□□□□□ -0.03
RASSF4-201ENST00000340258 MIER1Q8N108 512 aa14.83□□□□□ -0.04
RASSF4-201ENST00000340258 SMARCA4P51532 1647 aa14.79□□□□□ -0.04
RASSF4-201ENST00000340258 APLP2Q06481 763 aa14.72□□□□□ -0.05
RASSF4-201ENST00000340258 CEP162Q5TB80 1403 aa14.72□□□□□ -0.05
RASSF4-201ENST00000340258 CSRNP3Q8WYN3 585 aa14.68□□□□□ -0.06
RASSF4-201ENST00000340258 SOGA1O94964 1423 aa14.65□□□□□ -0.06
RASSF4-201ENST00000340258 ABCC8Q09428 1581 aa14.65□□□□□ -0.06
RASSF4-201ENST00000340258 CCDC88BA6NC98 1476 aa14.65□□□□□ -0.06
RASSF4-201ENST00000340258 TOP2AP11388 1531 aaKnown RBP14.62□□□□□ -0.07
RASSF4-201ENST00000340258 ATAD2BQ9ULI0 1458 aa14.56□□□□□ -0.08
RASSF4-201ENST00000340258 TNIKQ9UKE5 1360 aa14.55□□□□□ -0.08
RASSF4-201ENST00000340258 RUSC2Q8N2Y8 1516 aa14.54□□□□□ -0.08
RASSF4-201ENST00000340258 WRNQ14191 1432 aaPredicted RBP eCLIP14.53□□□□□ -0.08
RASSF4-201ENST00000340258 BAZ1BQ9UIG0 1483 aaKnown RBP14.52□□□□□ -0.08
RASSF4-201ENST00000340258 EIF4G1Q04637 1599 aaKnown RBP14.52□□□□□ -0.09
RASSF4-201ENST00000340258 ITGAEP38570 1179 aa14.51□□□□□ -0.09
RASSF4-201ENST00000340258 SMARCA2P51531 1590 aa14.5□□□□□ -0.09
RASSF4-201ENST00000340258 PEG3Q9GZU2 1588 aa14.5□□□□□ -0.09
RASSF4-201ENST00000340258 BCANQ96GW7 911 aa14.5□□□□□ -0.09
RASSF4-201ENST00000340258 SUPT16HQ9Y5B9 1047 aaKnown RBP14.45□□□□□ -0.1
RASSF4-201ENST00000340258 GOLGA3Q08378 1498 aa14.41□□□□□ -0.1
RASSF4-201ENST00000340258 CLIP1P30622 1438 aa14.4□□□□□ -0.1
RASSF4-201ENST00000340258 NCAPD3P42695 1498 aa14.37□□□□□ -0.11
RASSF4-201ENST00000340258 EEA1Q15075 1411 aa14.33□□□□□ -0.11
RASSF4-201ENST00000340258 KCNH8Q96L42 1107 aa14.33□□□□□ -0.11
RASSF4-201ENST00000340258 TSHZ2Q9NRE2 1034 aa14.31□□□□□ -0.12
RASSF4-201ENST00000340258 HMGXB3Q12766 1538 aa14.31□□□□□ -0.12
RASSF4-201ENST00000340258 CC2D2AQ9P2K1 1620 aa14.3□□□□□ -0.12
RASSF4-201ENST00000340258 FKBP8Q14318 412 aa14.28□□□□□ -0.12
RASSF4-201ENST00000340258 CEP164Q9UPV0 1460 aa14.26□□□□□ -0.13
RASSF4-201ENST00000340258 KANK4Q5T7N3 995 aaPredicted RBP14.26□□□□□ -0.13
RASSF4-201ENST00000340258 VPS8Q8N3P4 1428 aa14.26□□□□□ -0.13
RASSF4-201ENST00000340258 DDX10Q13206 875 aaKnown RBP14.24□□□□□ -0.13
RASSF4-201ENST00000340258 ANP32EQ9BTT0 268 aa14.24□□□□□ -0.13
RASSF4-201ENST00000340258 HIRIP3Q9BW71 556 aaPredicted RBP14.24□□□□□ -0.13
RASSF4-201ENST00000340258 ATP1B4Q9UN42 357 aaPredicted RBP14.23□□□□□ -0.13
RASSF4-201ENST00000340258 NEFLP07196 543 aa14.22□□□□□ -0.13
RASSF4-201ENST00000340258 DHX57Q6P158 1386 aaKnown RBP14.22□□□□□ -0.13
RASSF4-201ENST00000340258 CLSPNQ9HAW4 1339 aa14.21□□□□□ -0.13
RASSF4-201ENST00000340258 RAPGEF2Q9Y4G8 1499 aa14.2□□□□□ -0.14
RASSF4-201ENST00000340258 TRIM52Q96A61 297 aa14.2□□□□□ -0.14
RASSF4-201ENST00000340258 FAM50AQ14320 339 aaKnown RBP14.14□□□□□ -0.15
RASSF4-201ENST00000340258 SIN3AQ96ST3 1273 aa14.12□□□□□ -0.15
RASSF4-201ENST00000340258 BCL11AQ9H165 835 aa14.11□□□□□ -0.15
RASSF4-201ENST00000340258 DNAJC5BQ9UF47 199 aa14.11□□□□□ -0.15
RASSF4-201ENST00000340258 CFTRP13569 1480 aa14.1□□□□□ -0.15
RASSF4-201ENST00000340258 SYNJ1O43426 1573 aa14.09□□□□□ -0.15
RASSF4-201ENST00000340258 CADPSQ9ULU8 1353 aa14.09□□□□□ -0.15
RASSF4-201ENST00000340258 KIF21BO75037 1637 aa14.08□□□□□ -0.16
RASSF4-201ENST00000340258 IRX6P78412 446 aaPredicted RBP14.07□□□□□ -0.16
RASSF4-201ENST00000340258 P3H3Q8IVL6 736 aa14.05□□□□□ -0.16
RASSF4-201ENST00000340258 RBM19Q9Y4C8 960 aaKnown RBP14.05□□□□□ -0.16
RASSF4-201ENST00000340258 ERICH6Q7L0X2 663 aa14.05□□□□□ -0.16
RASSF4-201ENST00000340258 ANP32CO43423 234 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms