RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 NISCHQ9Y2I1 1504 aa24.65■■□□□ 1.54
TUBGCP2-210ENST00000543663 DCAF8L2P0C7V8 631 aa22.82■■□□□ 1.24
TUBGCP2-210ENST00000543663 SHROOM4Q9ULL8 1493 aa22.27■■□□□ 1.16
TUBGCP2-210ENST00000543663 SUPT5HO00267 1087 aaKnown RBP22.12■■□□□ 1.13
TUBGCP2-210ENST00000543663 EHMT2Q96KQ7 1210 aa21.45■■□□□ 1.02
TUBGCP2-210ENST00000543663 CCDC180Q9P1Z9 1646 aa21.02■□□□□ 0.95
TUBGCP2-210ENST00000543663 PCGF6Q9BYE7 350 aa20.95■□□□□ 0.94
TUBGCP2-210ENST00000543663 FAM9AQ8IZU1 332 aaPredicted RBP20.79■□□□□ 0.92
TUBGCP2-210ENST00000543663 ZCCHC6Q5VYS8 1495 aaKnown RBP20.72■□□□□ 0.91
TUBGCP2-210ENST00000543663 TTBK1Q5TCY1 1321 aaPredicted RBP20.69■□□□□ 0.9
TUBGCP2-210ENST00000543663 LOC105371045A0A1W2PR82 267 aa20.34■□□□□ 0.85
TUBGCP2-210ENST00000543663 CHIC1Q5VXU3 224 aa20.32■□□□□ 0.84
TUBGCP2-210ENST00000543663 DCAF1Q9Y4B6 1507 aa20.25■□□□□ 0.83
TUBGCP2-210ENST00000543663 PPARGC1BQ86YN6 1023 aaKnown RBP20.25■□□□□ 0.83
TUBGCP2-210ENST00000543663 TRIM41Q8WV44 630 aa20.23■□□□□ 0.83
TUBGCP2-210ENST00000543663 RANGAP1P46060 587 aaPredicted RBP20.17■□□□□ 0.82
TUBGCP2-210ENST00000543663 ABCC9O60706 1549 aa20.08■□□□□ 0.81
TUBGCP2-210ENST00000543663 CCER1Q8TC90 406 aaPredicted RBP20.03■□□□□ 0.8
TUBGCP2-210ENST00000543663 APLP2Q06481 763 aa19.95■□□□□ 0.78
TUBGCP2-210ENST00000543663 HRCP23327 699 aa19.94■□□□□ 0.78
TUBGCP2-210ENST00000543663 YTHDC1Q96MU7 727 aaKnown RBP19.93■□□□□ 0.78
TUBGCP2-210ENST00000543663 PABPN1Q86U42 306 aaKnown RBP eCLIP19.85■□□□□ 0.776e-7■■■■□ 22.8
TUBGCP2-210ENST00000543663 MYO15BQ96JP2 1530 aa19.8■□□□□ 0.76
TUBGCP2-210ENST00000543663 CENPBP07199 599 aaPredicted RBP19.76■□□□□ 0.75
TUBGCP2-210ENST00000543663 PELP1Q8IZL8 1130 aaKnown RBP19.74■□□□□ 0.75
TUBGCP2-210ENST00000543663 ZEB1P37275 1124 aaPredicted RBP19.72■□□□□ 0.75
TUBGCP2-210ENST00000543663 NACADO15069 1562 aa19.71■□□□□ 0.75
TUBGCP2-210ENST00000543663 UBTFP17480 764 aaKnown RBP19.7■□□□□ 0.74
TUBGCP2-210ENST00000543663 SCRIBQ14160 1630 aa19.68■□□□□ 0.74
TUBGCP2-210ENST00000543663 TRIM26Q12899 539 aaPredicted RBP19.66■□□□□ 0.74
TUBGCP2-210ENST00000543663 ATP1B4Q9UN42 357 aaPredicted RBP19.56■□□□□ 0.72
TUBGCP2-210ENST00000543663 RB1CC1Q8TDY2 1594 aa19.5■□□□□ 0.71
TUBGCP2-210ENST00000543663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.46■□□□□ 0.71
TUBGCP2-210ENST00000543663 RSF1Q96T23 1441 aaPredicted RBP19.42■□□□□ 0.7
TUBGCP2-210ENST00000543663 HNRNPUL2Q1KMD3 747 aaKnown RBP19.36■□□□□ 0.69
TUBGCP2-210ENST00000543663 ITGAEP38570 1179 aa19.34■□□□□ 0.69
TUBGCP2-210ENST00000543663 ERICH6Q7L0X2 663 aa19.23■□□□□ 0.67
TUBGCP2-210ENST00000543663 CNGB1Q14028 1251 aaPredicted RBP19.14■□□□□ 0.66
TUBGCP2-210ENST00000543663 DIEXFQ68CQ4 756 aaKnown RBP19.14■□□□□ 0.65
TUBGCP2-210ENST00000543663 BAZ1AQ9NRL2 1556 aaPredicted RBP19.13■□□□□ 0.65
TUBGCP2-210ENST00000543663 NEFLP07196 543 aa19.09■□□□□ 0.65
TUBGCP2-210ENST00000543663 CECR2Q9BXF3 1484 aa19.08■□□□□ 0.65
TUBGCP2-210ENST00000543663 GTF3C3Q9Y5Q9 886 aa19.04■□□□□ 0.64
TUBGCP2-210ENST00000543663 MROH2BQ7Z745 1585 aa19.01■□□□□ 0.63
TUBGCP2-210ENST00000543663 POLR3GLQ9BT43 218 aa18.92■□□□□ 0.62
TUBGCP2-210ENST00000543663 CSRNP3Q8WYN3 585 aa18.88■□□□□ 0.61
TUBGCP2-210ENST00000543663 BCANQ96GW7 911 aa18.88■□□□□ 0.61
TUBGCP2-210ENST00000543663 WIZO95785 1651 aa18.8■□□□□ 0.6
TUBGCP2-210ENST00000543663 TOP2AP11388 1531 aaKnown RBP18.78■□□□□ 0.6
TUBGCP2-210ENST00000543663 P3H3Q8IVL6 736 aa18.78■□□□□ 0.6
TUBGCP2-210ENST00000543663 SMARCA4P51532 1647 aa18.74■□□□□ 0.59
TUBGCP2-210ENST00000543663 MYT1Q01538 1121 aa18.74■□□□□ 0.59
TUBGCP2-210ENST00000543663 NEUROD1Q13562 356 aa18.69■□□□□ 0.58
TUBGCP2-210ENST00000543663 EEA1Q15075 1411 aa18.69■□□□□ 0.58
TUBGCP2-210ENST00000543663 ACIN1Q9UKV3 1341 aaKnown RBP18.68■□□□□ 0.58
TUBGCP2-210ENST00000543663 CCDC88BA6NC98 1476 aa18.65■□□□□ 0.58
TUBGCP2-210ENST00000543663 ARID3CA6NKF2 412 aa18.63■□□□□ 0.57
TUBGCP2-210ENST00000543663 BAZ1BQ9UIG0 1483 aaKnown RBP18.61■□□□□ 0.57
TUBGCP2-210ENST00000543663 FAM50AQ14320 339 aaKnown RBP18.6■□□□□ 0.57
TUBGCP2-210ENST00000543663 SMARCA2P51531 1590 aa18.58■□□□□ 0.56
TUBGCP2-210ENST00000543663 ZNF316A6NFI3 1004 aaPredicted RBP18.57■□□□□ 0.56
TUBGCP2-210ENST00000543663 SCAF1Q9H7N4 1312 aaKnown RBP18.56■□□□□ 0.56
TUBGCP2-210ENST00000543663 WRNQ14191 1432 aaPredicted RBP eCLIP18.52■□□□□ 0.56
TUBGCP2-210ENST00000543663 SOGA1O94964 1423 aa18.5■□□□□ 0.55
TUBGCP2-210ENST00000543663 ABCC8Q09428 1581 aa18.46■□□□□ 0.55
TUBGCP2-210ENST00000543663 ATAD2BQ9ULI0 1458 aa18.45■□□□□ 0.54
TUBGCP2-210ENST00000543663 TNIKQ9UKE5 1360 aa18.42■□□□□ 0.54
TUBGCP2-210ENST00000543663 GOLGA3Q08378 1498 aa18.4■□□□□ 0.54
TUBGCP2-210ENST00000543663 BICRAQ9NZM4 1560 aa18.38■□□□□ 0.53
TUBGCP2-210ENST00000543663 CEP162Q5TB80 1403 aa18.37■□□□□ 0.53
TUBGCP2-210ENST00000543663 UNC13AQ9UPW8 1703 aa18.37■□□□□ 0.53
TUBGCP2-210ENST00000543663 FBLN2P98095 1184 aa18.36■□□□□ 0.53
TUBGCP2-210ENST00000543663 TRIM52Q96A61 297 aa18.35■□□□□ 0.53
TUBGCP2-210ENST00000543663 ZNF326Q5BKZ1 582 aaKnown RBP18.33■□□□□ 0.52
TUBGCP2-210ENST00000543663 CEP164Q9UPV0 1460 aa18.33■□□□□ 0.52
TUBGCP2-210ENST00000543663 MYT1LQ9UL68 1186 aa18.31■□□□□ 0.52
TUBGCP2-210ENST00000543663 DAXXQ9UER7 740 aaPredicted RBP18.3■□□□□ 0.52
TUBGCP2-210ENST00000543663 PEG3Q9GZU2 1588 aa18.3■□□□□ 0.52
TUBGCP2-210ENST00000543663 MIER1Q8N108 512 aa18.27■□□□□ 0.52
TUBGCP2-210ENST00000543663 CLIP1P30622 1438 aa18.27■□□□□ 0.52
TUBGCP2-210ENST00000543663 RUSC2Q8N2Y8 1516 aa18.26■□□□□ 0.51
TUBGCP2-210ENST00000543663 ANP32CO43423 234 aa18.24■□□□□ 0.51
TUBGCP2-210ENST00000543663 HIRIP3Q9BW71 556 aaPredicted RBP18.23■□□□□ 0.51
TUBGCP2-210ENST00000543663 FKBP8Q14318 412 aa18.21■□□□□ 0.51
TUBGCP2-210ENST00000543663 DDX10Q13206 875 aaKnown RBP18.2■□□□□ 0.5
TUBGCP2-210ENST00000543663 NCAPD3P42695 1498 aa18.19■□□□□ 0.5
TUBGCP2-210ENST00000543663 SLC4A1APQ9BWU0 796 aaKnown RBP18.19■□□□□ 0.5
TUBGCP2-210ENST00000543663 RTL5Q5HYW3 569 aaPredicted RBP18.16■□□□□ 0.5
TUBGCP2-210ENST00000543663 EIF4G1Q04637 1599 aaKnown RBP18.16■□□□□ 0.5
TUBGCP2-210ENST00000543663 KIF27Q86VH2 1401 aa18.14■□□□□ 0.5
TUBGCP2-210ENST00000543663 CLSPNQ9HAW4 1339 aa18.13■□□□□ 0.49
TUBGCP2-210ENST00000543663 HMGXB3Q12766 1538 aa18.11■□□□□ 0.49
TUBGCP2-210ENST00000543663 CHIC2Q9UKJ5 165 aa18.11■□□□□ 0.49
TUBGCP2-210ENST00000543663 CDK11AQ9UQ88 783 aaPredicted RBP18.11■□□□□ 0.49
TUBGCP2-210ENST00000543663 KANK4Q5T7N3 995 aaPredicted RBP18.07■□□□□ 0.48
TUBGCP2-210ENST00000543663 IRX6P78412 446 aaPredicted RBP18.07■□□□□ 0.48
TUBGCP2-210ENST00000543663 SENP3-EIF4A1A0A087X0R7 540 aa18.05■□□□□ 0.48
TUBGCP2-210ENST00000543663 ZNF777Q9ULD5 760 aaPredicted RBP18.04■□□□□ 0.48
TUBGCP2-210ENST00000543663 BCL11AQ9H165 835 aa18.03■□□□□ 0.48
TUBGCP2-210ENST00000543663 HNRNPUQ00839 825 aaKnown RBP eCLIP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms