RNA–Protein interactions for RNA: ENST00000459711.5

CHRD-207, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 503 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-207ENST00000459711 NISCHQ9Y2I1 1504 aa50.84■■■■■ 5.73
CHRD-207ENST00000459711 ABCC9O60706 1549 aa46.38■■■■■ 5.02
CHRD-207ENST00000459711 CCDC180Q9P1Z9 1646 aa45.89■■■■■ 4.94
CHRD-207ENST00000459711 DNAJC5BQ9UF47 199 aa44.01■■■■■ 4.64
CHRD-207ENST00000459711 RB1CC1Q8TDY2 1594 aa43.93■■■■■ 4.62
CHRD-207ENST00000459711 NACADO15069 1562 aa43.5■■■■■ 4.55
CHRD-207ENST00000459711 PABPN1Q86U42 306 aaKnown RBP eCLIP43.07■■■■■ 4.492e-7■■■■□ 22.9
CHRD-207ENST00000459711 DCAF8L2P0C7V8 631 aa43.05■■■■■ 4.48
CHRD-207ENST00000459711 UNC13AQ9UPW8 1703 aa42.95■■■■■ 4.47
CHRD-207ENST00000459711 MYO15BQ96JP2 1530 aa42.76■■■■■ 4.44
CHRD-207ENST00000459711 BICRAQ9NZM4 1560 aa42.69■■■■■ 4.43
CHRD-207ENST00000459711 SHROOM4Q9ULL8 1493 aa42.1■■■■■ 4.33
CHRD-207ENST00000459711 ZCCHC6Q5VYS8 1495 aaKnown RBP42.04■■■■■ 4.32
CHRD-207ENST00000459711 DCAF1Q9Y4B6 1507 aa42■■■■■ 4.31
CHRD-207ENST00000459711 CC2D2AQ9P2K1 1620 aa41.9■■■■■ 4.3
CHRD-207ENST00000459711 CECR2Q9BXF3 1484 aa41.86■■■■■ 4.29
CHRD-207ENST00000459711 SCRIBQ14160 1630 aa41.73■■■■■ 4.27
CHRD-207ENST00000459711 EIF4G1Q04637 1599 aaKnown RBP41.68■■■■■ 4.26
CHRD-207ENST00000459711 DNAJC5Q9H3Z4 198 aa40.84■■■■■ 4.13
CHRD-207ENST00000459711 CUX2O14529 1486 aa40.26■■■■■ 4.03
CHRD-207ENST00000459711 NCAPD3P42695 1498 aa40.18■■■■■ 4.02
CHRD-207ENST00000459711 ERCC6Q03468 1493 aa40.08■■■■■ 4.01
CHRD-207ENST00000459711 ATAD2BQ9ULI0 1458 aa39.96■■■■□ 3.99
CHRD-207ENST00000459711 HMGXB3Q12766 1538 aa39.84■■■■□ 3.97
CHRD-207ENST00000459711 SMARCA2P51531 1590 aa39.83■■■■□ 3.97
CHRD-207ENST00000459711 SMARCA4P51532 1647 aa39.79■■■■□ 3.96
CHRD-207ENST00000459711 NESP48681 1621 aa39.7■■■■□ 3.95
CHRD-207ENST00000459711 BAZ1BQ9UIG0 1483 aaKnown RBP39.54■■■■□ 3.92
CHRD-207ENST00000459711 BAZ1AQ9NRL2 1556 aaPredicted RBP39.5■■■■□ 3.91
CHRD-207ENST00000459711 THOC2Q8NI27 1593 aaKnown RBP39.45■■■■□ 3.91
CHRD-207ENST00000459711 PEG3Q9GZU2 1588 aa39.43■■■■□ 3.9
CHRD-207ENST00000459711 LAMC3Q9Y6N6 1575 aa39.36■■■■□ 3.89
CHRD-207ENST00000459711 KIF21AQ7Z4S6 1674 aa39.18■■■■□ 3.86
CHRD-207ENST00000459711 MROH2BQ7Z745 1585 aa39.16■■■■□ 3.86
CHRD-207ENST00000459711 PDS5BQ9NTI5 1447 aa39.14■■■■□ 3.86
CHRD-207ENST00000459711 CADPSQ9ULU8 1353 aa38.92■■■■□ 3.82
CHRD-207ENST00000459711 MRC2Q9UBG0 1479 aa38.84■■■■□ 3.81
CHRD-207ENST00000459711 WDR62O43379 1518 aa38.78■■■■□ 3.8
CHRD-207ENST00000459711 TRIM41Q8WV44 630 aa38.76■■■■□ 3.8
CHRD-207ENST00000459711 WIZO95785 1651 aa38.65■■■■□ 3.78
CHRD-207ENST00000459711 CEP164Q9UPV0 1460 aa38.57■■■■□ 3.76
CHRD-207ENST00000459711 FANCD2Q9BXW9 1451 aa38.47■■■■□ 3.75
CHRD-207ENST00000459711 CFTRP13569 1480 aa38.37■■■■□ 3.73
CHRD-207ENST00000459711 OSCARQ8IYS5 282 aa38.27■■■■□ 3.72
CHRD-207ENST00000459711 URB2Q14146 1524 aaKnown RBP38.2■■■■□ 3.71
CHRD-207ENST00000459711 RSF1Q96T23 1441 aaPredicted RBP38.15■■■■□ 3.7
CHRD-207ENST00000459711 TOP2AP11388 1531 aaKnown RBP38.15■■■■□ 3.7
CHRD-207ENST00000459711 PRDM2Q13029 1718 aa37.94■■■■□ 3.66
CHRD-207ENST00000459711 RIMBP3CA6NJZ7 1639 aa37.87■■■■□ 3.65
CHRD-207ENST00000459711 RIMBP3BA6NNM3 1639 aa37.87■■■■□ 3.65
CHRD-207ENST00000459711 RIMBP3Q9UFD9 1639 aa37.87■■■■□ 3.65
CHRD-207ENST00000459711 IFT140Q96RY7 1462 aa37.82■■■■□ 3.64
CHRD-207ENST00000459711 ZNF608Q9ULD9 1512 aaPredicted RBP37.81■■■■□ 3.64
CHRD-207ENST00000459711 CCDC88BA6NC98 1476 aa37.71■■■■□ 3.63
CHRD-207ENST00000459711 ARHGEF11O15085 1522 aa37.7■■■■□ 3.63
CHRD-207ENST00000459711 TOPBP1Q92547 1522 aa37.68■■■■□ 3.62
CHRD-207ENST00000459711 EIF4G3O43432 1585 aaKnown RBP37.59■■■■□ 3.61
CHRD-207ENST00000459711 ABCC8Q09428 1581 aa37.56■■■■□ 3.6
CHRD-207ENST00000459711 DNMBPQ6XZF7 1577 aa37.51■■■■□ 3.59
CHRD-207ENST00000459711 TARBP1Q13395 1621 aaKnown RBP37.4■■■■□ 3.58
CHRD-207ENST00000459711 CHD1O14646 1710 aa37.4■■■■□ 3.58
CHRD-207ENST00000459711 CYB5RLQ6IPT4 315 aa37.39■■■■□ 3.58
CHRD-207ENST00000459711 AQRO60306 1485 aaKnown RBP eCLIP37.39■■■■□ 3.58
CHRD-207ENST00000459711 ARAP1Q96P48 1450 aa37.3■■■■□ 3.56
CHRD-207ENST00000459711 POLA1P09884 1462 aaPredicted RBP37.27■■■■□ 3.56
CHRD-207ENST00000459711 FBLN2P98095 1184 aa37.2■■■■□ 3.55
CHRD-207ENST00000459711 TRHP20396 242 aaPredicted RBP37.14■■■■□ 3.54
CHRD-207ENST00000459711 RAD54L2Q9Y4B4 1467 aa37.13■■■■□ 3.53
CHRD-207ENST00000459711 TDRD9Q8NDG6 1382 aaKnown RBP37.06■■■■□ 3.52
CHRD-207ENST00000459711 SOGA1O94964 1423 aa37.06■■■■□ 3.52
CHRD-207ENST00000459711 WDR97A6NE52 1622 aa37.01■■■■□ 3.52
CHRD-207ENST00000459711 SNAPC4Q5SXM2 1469 aa37.01■■■■□ 3.51
CHRD-207ENST00000459711 CLASP1Q7Z460 1538 aa36.99■■■■□ 3.51
CHRD-207ENST00000459711 FGD5Q6ZNL6 1462 aa36.94■■■■□ 3.5
CHRD-207ENST00000459711 MAGI1Q96QZ7 1491 aaPredicted RBP36.89■■■■□ 3.5
CHRD-207ENST00000459711 SYNJ1O43426 1573 aa36.89■■■■□ 3.5
CHRD-207ENST00000459711 CHMP7Q8WUX9 453 aaPredicted RBP36.86■■■■□ 3.49
CHRD-207ENST00000459711 CUX1P39880 1505 aa36.84■■■■□ 3.49
CHRD-207ENST00000459711 GRIN2BQ13224 1484 aa36.82■■■■□ 3.49
CHRD-207ENST00000459711 SYNJ2O15056 1496 aa36.78■■■■□ 3.48
CHRD-207ENST00000459711 PBRM1Q86U86 1689 aa36.64■■■■□ 3.46
CHRD-207ENST00000459711 GAPVD1Q14C86 1478 aa36.62■■■■□ 3.45
CHRD-207ENST00000459711 ABCA5Q8WWZ7 1642 aa36.52■■■■□ 3.44
CHRD-207ENST00000459711 ABCA10Q8WWZ4 1543 aa36.51■■■■□ 3.44
CHRD-207ENST00000459711 AEBP2Q6ZN18 517 aaPredicted RBP36.47■■■■□ 3.43
CHRD-207ENST00000459711 GRIN2AQ12879 1464 aa36.36■■■■□ 3.41
CHRD-207ENST00000459711 ERCC6L2Q5T890 1561 aa36.35■■■■□ 3.41
CHRD-207ENST00000459711 ADAMTS12P58397 1594 aa36.28■■■■□ 3.4
CHRD-207ENST00000459711 NUP160Q12769 1436 aa36.27■■■■□ 3.4
CHRD-207ENST00000459711 CEP170Q5SW79 1584 aa36.26■■■■□ 3.39
CHRD-207ENST00000459711 WRNQ14191 1432 aaPredicted RBP eCLIP36.24■■■■□ 3.39
CHRD-207ENST00000459711 SHROOM2Q13796 1616 aa36.18■■■■□ 3.38
CHRD-207ENST00000459711 FHAD1B1AJZ9 1412 aa36.14■■■■□ 3.38
CHRD-207ENST00000459711 BIVM-ERCC5R4GMW8 1640 aa36.11■■■■□ 3.37
CHRD-207ENST00000459711 TOP2BQ02880 1626 aa36.1■■■■□ 3.37
CHRD-207ENST00000459711 ERICH3Q5RHP9 1530 aa36.04■■■■□ 3.36
CHRD-207ENST00000459711 KIF13AQ9H1H9 1805 aa35.99■■■■□ 3.35
CHRD-207ENST00000459711 SUPT5HO00267 1087 aaKnown RBP35.96■■■■□ 3.35
CHRD-207ENST00000459711 PRG4Q92954 1404 aaPredicted RBP35.93■■■■□ 3.34
CHRD-207ENST00000459711 JPH4Q96JJ6 628 aa35.85■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms