RNA–Protein interactions for RNA: ENST00000459711.5

CHRD-207, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 503 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-207ENST00000459711 NISCHQ9Y2I1 1504 aa50.84■■■■■ 5.73
CHRD-207ENST00000459711 ABCC9O60706 1549 aa46.38■■■■■ 5.02
CHRD-207ENST00000459711 CCDC180Q9P1Z9 1646 aa45.89■■■■■ 4.94
CHRD-207ENST00000459711 DNAJC5BQ9UF47 199 aa44.01■■■■■ 4.64
CHRD-207ENST00000459711 RB1CC1Q8TDY2 1594 aa43.93■■■■■ 4.62
CHRD-207ENST00000459711 NACADO15069 1562 aa43.5■■■■■ 4.55
CHRD-207ENST00000459711 PABPN1Q86U42 306 aaKnown RBP eCLIP43.07■■■■■ 4.492e-7■■■■□ 22.9
CHRD-207ENST00000459711 DCAF8L2P0C7V8 631 aa43.05■■■■■ 4.48
CHRD-207ENST00000459711 UNC13AQ9UPW8 1703 aa42.95■■■■■ 4.47
CHRD-207ENST00000459711 MYO15BQ96JP2 1530 aa42.76■■■■■ 4.44
CHRD-207ENST00000459711 BICRAQ9NZM4 1560 aa42.69■■■■■ 4.43
CHRD-207ENST00000459711 SHROOM4Q9ULL8 1493 aa42.1■■■■■ 4.33
CHRD-207ENST00000459711 ZCCHC6Q5VYS8 1495 aaKnown RBP42.04■■■■■ 4.32
CHRD-207ENST00000459711 DCAF1Q9Y4B6 1507 aa42■■■■■ 4.31
CHRD-207ENST00000459711 CC2D2AQ9P2K1 1620 aa41.9■■■■■ 4.3
CHRD-207ENST00000459711 CECR2Q9BXF3 1484 aa41.86■■■■■ 4.29
CHRD-207ENST00000459711 SCRIBQ14160 1630 aa41.73■■■■■ 4.27
CHRD-207ENST00000459711 EIF4G1Q04637 1599 aaKnown RBP41.68■■■■■ 4.26
CHRD-207ENST00000459711 DNAJC5Q9H3Z4 198 aa40.84■■■■■ 4.13
CHRD-207ENST00000459711 CUX2O14529 1486 aa40.26■■■■■ 4.03
CHRD-207ENST00000459711 NCAPD3P42695 1498 aa40.18■■■■■ 4.02
CHRD-207ENST00000459711 ERCC6Q03468 1493 aa40.08■■■■■ 4.01
CHRD-207ENST00000459711 ATAD2BQ9ULI0 1458 aa39.96■■■■□ 3.99
CHRD-207ENST00000459711 HMGXB3Q12766 1538 aa39.84■■■■□ 3.97
CHRD-207ENST00000459711 SMARCA2P51531 1590 aa39.83■■■■□ 3.97
CHRD-207ENST00000459711 SMARCA4P51532 1647 aa39.79■■■■□ 3.96
CHRD-207ENST00000459711 NESP48681 1621 aa39.7■■■■□ 3.95
CHRD-207ENST00000459711 BAZ1BQ9UIG0 1483 aaKnown RBP39.54■■■■□ 3.92
CHRD-207ENST00000459711 BAZ1AQ9NRL2 1556 aaPredicted RBP39.5■■■■□ 3.91
CHRD-207ENST00000459711 THOC2Q8NI27 1593 aaKnown RBP39.45■■■■□ 3.91
CHRD-207ENST00000459711 PEG3Q9GZU2 1588 aa39.43■■■■□ 3.9
CHRD-207ENST00000459711 LAMC3Q9Y6N6 1575 aa39.36■■■■□ 3.89
CHRD-207ENST00000459711 KIF21AQ7Z4S6 1674 aa39.18■■■■□ 3.86
CHRD-207ENST00000459711 MROH2BQ7Z745 1585 aa39.16■■■■□ 3.86
CHRD-207ENST00000459711 PDS5BQ9NTI5 1447 aa39.14■■■■□ 3.86
CHRD-207ENST00000459711 CADPSQ9ULU8 1353 aa38.92■■■■□ 3.82
CHRD-207ENST00000459711 MRC2Q9UBG0 1479 aa38.84■■■■□ 3.81
CHRD-207ENST00000459711 WDR62O43379 1518 aa38.78■■■■□ 3.8
CHRD-207ENST00000459711 TRIM41Q8WV44 630 aa38.76■■■■□ 3.8
CHRD-207ENST00000459711 WIZO95785 1651 aa38.65■■■■□ 3.78
CHRD-207ENST00000459711 CEP164Q9UPV0 1460 aa38.57■■■■□ 3.76
CHRD-207ENST00000459711 FANCD2Q9BXW9 1451 aa38.47■■■■□ 3.75
CHRD-207ENST00000459711 CFTRP13569 1480 aa38.37■■■■□ 3.73
CHRD-207ENST00000459711 OSCARQ8IYS5 282 aa38.27■■■■□ 3.72
CHRD-207ENST00000459711 URB2Q14146 1524 aaKnown RBP38.2■■■■□ 3.71
CHRD-207ENST00000459711 RSF1Q96T23 1441 aaPredicted RBP38.15■■■■□ 3.7
CHRD-207ENST00000459711 TOP2AP11388 1531 aaKnown RBP38.15■■■■□ 3.7
CHRD-207ENST00000459711 PRDM2Q13029 1718 aa37.94■■■■□ 3.66
CHRD-207ENST00000459711 RIMBP3CA6NJZ7 1639 aa37.87■■■■□ 3.65
CHRD-207ENST00000459711 RIMBP3BA6NNM3 1639 aa37.87■■■■□ 3.65
CHRD-207ENST00000459711 RIMBP3Q9UFD9 1639 aa37.87■■■■□ 3.65
CHRD-207ENST00000459711 IFT140Q96RY7 1462 aa37.82■■■■□ 3.64
CHRD-207ENST00000459711 ZNF608Q9ULD9 1512 aaPredicted RBP37.81■■■■□ 3.64
CHRD-207ENST00000459711 CCDC88BA6NC98 1476 aa37.71■■■■□ 3.63
CHRD-207ENST00000459711 ARHGEF11O15085 1522 aa37.7■■■■□ 3.63
CHRD-207ENST00000459711 TOPBP1Q92547 1522 aa37.68■■■■□ 3.62
CHRD-207ENST00000459711 EIF4G3O43432 1585 aaKnown RBP37.59■■■■□ 3.61
CHRD-207ENST00000459711 ABCC8Q09428 1581 aa37.56■■■■□ 3.6
CHRD-207ENST00000459711 DNMBPQ6XZF7 1577 aa37.51■■■■□ 3.59
CHRD-207ENST00000459711 TARBP1Q13395 1621 aaKnown RBP37.4■■■■□ 3.58
CHRD-207ENST00000459711 CHD1O14646 1710 aa37.4■■■■□ 3.58
CHRD-207ENST00000459711 CYB5RLQ6IPT4 315 aa37.39■■■■□ 3.58
CHRD-207ENST00000459711 AQRO60306 1485 aaKnown RBP eCLIP37.39■■■■□ 3.58
CHRD-207ENST00000459711 ARAP1Q96P48 1450 aa37.3■■■■□ 3.56
CHRD-207ENST00000459711 POLA1P09884 1462 aaPredicted RBP37.27■■■■□ 3.56
CHRD-207ENST00000459711 FBLN2P98095 1184 aa37.2■■■■□ 3.55
CHRD-207ENST00000459711 TRHP20396 242 aaPredicted RBP37.14■■■■□ 3.54
CHRD-207ENST00000459711 RAD54L2Q9Y4B4 1467 aa37.13■■■■□ 3.53
CHRD-207ENST00000459711 TDRD9Q8NDG6 1382 aaKnown RBP37.06■■■■□ 3.52
CHRD-207ENST00000459711 SOGA1O94964 1423 aa37.06■■■■□ 3.52
CHRD-207ENST00000459711 WDR97A6NE52 1622 aa37.01■■■■□ 3.52
CHRD-207ENST00000459711 SNAPC4Q5SXM2 1469 aa37.01■■■■□ 3.51
CHRD-207ENST00000459711 CLASP1Q7Z460 1538 aa36.99■■■■□ 3.51
CHRD-207ENST00000459711 FGD5Q6ZNL6 1462 aa36.94■■■■□ 3.5
CHRD-207ENST00000459711 MAGI1Q96QZ7 1491 aaPredicted RBP36.89■■■■□ 3.5
CHRD-207ENST00000459711 SYNJ1O43426 1573 aa36.89■■■■□ 3.5
CHRD-207ENST00000459711 CHMP7Q8WUX9 453 aaPredicted RBP36.86■■■■□ 3.49
CHRD-207ENST00000459711 CUX1P39880 1505 aa36.84■■■■□ 3.49
CHRD-207ENST00000459711 GRIN2BQ13224 1484 aa36.82■■■■□ 3.49
CHRD-207ENST00000459711 SYNJ2O15056 1496 aa36.78■■■■□ 3.48
CHRD-207ENST00000459711 PBRM1Q86U86 1689 aa36.64■■■■□ 3.46
CHRD-207ENST00000459711 GAPVD1Q14C86 1478 aa36.62■■■■□ 3.45
CHRD-207ENST00000459711 ABCA5Q8WWZ7 1642 aa36.52■■■■□ 3.44
CHRD-207ENST00000459711 ABCA10Q8WWZ4 1543 aa36.51■■■■□ 3.44
CHRD-207ENST00000459711 AEBP2Q6ZN18 517 aaPredicted RBP36.47■■■■□ 3.43
CHRD-207ENST00000459711 GRIN2AQ12879 1464 aa36.36■■■■□ 3.41
CHRD-207ENST00000459711 ERCC6L2Q5T890 1561 aa36.35■■■■□ 3.41
CHRD-207ENST00000459711 ADAMTS12P58397 1594 aa36.28■■■■□ 3.4
CHRD-207ENST00000459711 NUP160Q12769 1436 aa36.27■■■■□ 3.4
CHRD-207ENST00000459711 CEP170Q5SW79 1584 aa36.26■■■■□ 3.39
CHRD-207ENST00000459711 WRNQ14191 1432 aaPredicted RBP eCLIP36.24■■■■□ 3.39
CHRD-207ENST00000459711 SHROOM2Q13796 1616 aa36.18■■■■□ 3.38
CHRD-207ENST00000459711 FHAD1B1AJZ9 1412 aa36.14■■■■□ 3.38
CHRD-207ENST00000459711 BIVM-ERCC5R4GMW8 1640 aa36.11■■■■□ 3.37
CHRD-207ENST00000459711 TOP2BQ02880 1626 aa36.1■■■■□ 3.37
CHRD-207ENST00000459711 ERICH3Q5RHP9 1530 aa36.04■■■■□ 3.36
CHRD-207ENST00000459711 KIF13AQ9H1H9 1805 aa35.99■■■■□ 3.35
CHRD-207ENST00000459711 SUPT5HO00267 1087 aaKnown RBP35.96■■■■□ 3.35
CHRD-207ENST00000459711 PRG4Q92954 1404 aaPredicted RBP35.93■■■■□ 3.34
CHRD-207ENST00000459711 JPH4Q96JJ6 628 aa35.85■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms